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HG10003495 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003495
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTMV resistance protein N-like
Genome locationChr08:2274064..2274801
RNA-Seq ExpressionHG10003495
SyntenyHG10003495
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592347.1 Disease resistance protein RUN1, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3738.46Show/hide
Query:  LRYYPKLPRVIEKARLVDCFMVEIFPDSTKDLLEGSYF---VNLLNCYKLANNKELYKLIISWMQKASCQDGAFNILIPGNEIPEWLVYNNKNG---YEV
        L ++P+LP  I +     C  ++ F D +K  ++ SYF   +NL+NC++  +NKEL+KLI SWMQK   + GAFNIL+PG+EIP+W            E 
Subjt:  LRYYPKLPRVIEKARLVDCFMVEIFPDSTKDLLEGSYF---VNLLNCYKLANNKELYKLIISWMQKASCQDGAFNILIPGNEIPEWLVYNNKNG---YEV

Query:  GSKPSKRQLDRIALCVVCGPTDNGRFSMSSSFAMVANVFGTEPYNQELRTKMGSINAFYVPKMRNLDHVWCFVIPRYESLTRLIEECREIMFQFVLERRH
                + R ALCV+CGP+ N +  +   F + A+V G +  +  L      + AF V  M+ LDH+W FV+PR  +LTR I  C+EI F+F+L+  +
Subjt:  GSKPSKRQLDRIALCVVCGPTDNGRFSMSSSFAMVANVFGTEPYNQELRTKMGSINAFYVPKMRNLDHVWCFVIPRYESLTRLIEECREIMFQFVLERRH

Query:  PSQFALRSNIRMKKCGVRLISMEEEKGAMRLHT---LIRNNKIELLK
             +  N+ +KKCGV LI+MEEE  AM+ +    +++N    LLK
Subjt:  PSQFALRSNIRMKKCGVRLISMEEEKGAMRLHT---LIRNNKIELLK

XP_022141876.1 TMV resistance protein N-like isoform X1 [Momordica charantia]1.2e-3841.32Show/hide
Query:  YPKLPRVIEKARLVDCFMVEIFPDSTKDLLEGSYF---VNLLNCYKLANNKELYKLIISWMQKASCQDGAFNILIPGNEIPEWLVYNNKNG---YEVGSK
        +P+LP  I       C  ++  P+ +K  ++ SYF   VNLLNCY+LA+N  L++LI  WM+K   + G FNI+IPG++IP+W            E    
Subjt:  YPKLPRVIEKARLVDCFMVEIFPDSTKDLLEGSYF---VNLLNCYKLANNKELYKLIISWMQKASCQDGAFNILIPGNEIPEWLVYNNKNG---YEVGSK

Query:  PSKRQLDRIALCVVCGPTDNGRFSMSSSFAMVANVFGTEPYNQELRTKMGSINAFYVPKMRNLDHVWCFVIPRYESLTRLIEECREIMFQFVLERRHPSQ
         +   L R ALCVVCGPT+ G   + + FA++A+V G    +  L      +NAF V  MR LDH+W FV+PR +SL R I  C+EI FQF+++  + S+
Subjt:  PSKRQLDRIALCVVCGPTDNGRFSMSSSFAMVANVFGTEPYNQELRTKMGSINAFYVPKMRNLDHVWCFVIPRYESLTRLIEECREIMFQFVLERRHPSQ

Query:  FALRSNIRMKKCGVRLISMEEEKGAMRLHT--LIRNNKIELL
         A   +I +KKCGV LI+MEEEK AM+ +   +I  NK+  L
Subjt:  FALRSNIRMKKCGVRLISMEEEKGAMRLHT--LIRNNKIELL

XP_022141877.1 TMV resistance protein N-like isoform X2 [Momordica charantia]1.2e-3841.32Show/hide
Query:  YPKLPRVIEKARLVDCFMVEIFPDSTKDLLEGSYF---VNLLNCYKLANNKELYKLIISWMQKASCQDGAFNILIPGNEIPEWLVYNNKNG---YEVGSK
        +P+LP  I       C  ++  P+ +K  ++ SYF   VNLLNCY+LA+N  L++LI  WM+K   + G FNI+IPG++IP+W            E    
Subjt:  YPKLPRVIEKARLVDCFMVEIFPDSTKDLLEGSYF---VNLLNCYKLANNKELYKLIISWMQKASCQDGAFNILIPGNEIPEWLVYNNKNG---YEVGSK

Query:  PSKRQLDRIALCVVCGPTDNGRFSMSSSFAMVANVFGTEPYNQELRTKMGSINAFYVPKMRNLDHVWCFVIPRYESLTRLIEECREIMFQFVLERRHPSQ
         +   L R ALCVVCGPT+ G   + + FA++A+V G    +  L      +NAF V  MR LDH+W FV+PR +SL R I  C+EI FQF+++  + S+
Subjt:  PSKRQLDRIALCVVCGPTDNGRFSMSSSFAMVANVFGTEPYNQELRTKMGSINAFYVPKMRNLDHVWCFVIPRYESLTRLIEECREIMFQFVLERRHPSQ

Query:  FALRSNIRMKKCGVRLISMEEEKGAMRLHT--LIRNNKIELL
         A   +I +KKCGV LI+MEEEK AM+ +   +I  NK+  L
Subjt:  FALRSNIRMKKCGVRLISMEEEKGAMRLHT--LIRNNKIELL

XP_022925367.1 TMV resistance protein N-like [Cucurbita moschata]8.9e-3738.06Show/hide
Query:  LRYYPKLPRVIEKARLVDCFMVEIFPDSTKDLLEGSYF---VNLLNCYKLANNKELYKLIISWMQKASCQDGAFNILIPGNEIPEWLVYNNKNG---YEV
        L ++P+LP  I +     C  ++ F D +K  ++ SYF   +NL+NC++  +NKEL KLI SWMQK   + GAFNIL+PG+EIP+W            E 
Subjt:  LRYYPKLPRVIEKARLVDCFMVEIFPDSTKDLLEGSYF---VNLLNCYKLANNKELYKLIISWMQKASCQDGAFNILIPGNEIPEWLVYNNKNG---YEV

Query:  GSKPSKRQLDRIALCVVCGPTDNGRFSMSSSFAMVANVFGTEPYNQELRTKMGSINAFYVPKMRNLDHVWCFVIPRYESLTRLIEECREIMFQFVLERRH
                + R ALCV+CGP+ N +  +   F + A+V G +  +  L      + AF V  M+ LDH+W FV+PR  +LTR I  C+EI F+F+L+  +
Subjt:  GSKPSKRQLDRIALCVVCGPTDNGRFSMSSSFAMVANVFGTEPYNQELRTKMGSINAFYVPKMRNLDHVWCFVIPRYESLTRLIEECREIMFQFVLERRH

Query:  PSQFALRSNIRMKKCGVRLISMEEEKGAMRLHT---LIRNNKIELLK
             +  N+ +KKCGV LI+MEEE  AM+ +    +++N    L+K
Subjt:  PSQFALRSNIRMKKCGVRLISMEEEKGAMRLHT---LIRNNKIELLK

XP_023535476.1 TMV resistance protein N-like isoform X1 [Cucurbita pepo subsp. pepo]6.8e-3738.87Show/hide
Query:  LRYYPKLPRVIEKARLVDCFMVEIFPDSTKDLLEGSYF---VNLLNCYKLANNKELYKLIISWMQKASCQDGAFNILIPGNEIPEWLVYNNKNG---YEV
        L ++PKLP  I +     C  ++ F D +K  ++ SYF   +NL+NC++  +NKEL+KLI SWMQK   + G FNIL+PG EIP+W            E 
Subjt:  LRYYPKLPRVIEKARLVDCFMVEIFPDSTKDLLEGSYF---VNLLNCYKLANNKELYKLIISWMQKASCQDGAFNILIPGNEIPEWLVYNNKNG---YEV

Query:  GSKPSKRQLDRIALCVVCGPTDNGRFSMSSSFAMVANVFGTEPYNQELRTKMGSINAFYVPKMRNLDHVWCFVIPRYESLTRLIEECREIMFQFVLERRH
                + R ALCV+CGP+ N +  +   F + A+V G +  +  L      + AF V  M+ LDH+W FV+PR  +LTR I  C+EI F+FVL+  +
Subjt:  GSKPSKRQLDRIALCVVCGPTDNGRFSMSSSFAMVANVFGTEPYNQELRTKMGSINAFYVPKMRNLDHVWCFVIPRYESLTRLIEECREIMFQFVLERRH

Query:  PSQFALRSNIRMKKCGVRLISMEEEKGAMRLHT---LIRNNKIELLK
             +  N+ +KKCGV LI+MEEE  AM+ +    +++N    LLK
Subjt:  PSQFALRSNIRMKKCGVRLISMEEEKGAMRLHT---LIRNNKIELLK

TrEMBL top hitse value%identityAlignment
A0A1S3CBN9 TMV resistance protein N-like3.1e-3539.83Show/hide
Query:  YPKLPRVIEKARLVDCFMVEIFPDSTK-DLLEGSYFVNLLNCYKLANNKELYKLIISWMQKASCQDGAFNILIPGNEIPEWLVYNNKNG---YEVGSKPS
        +PKLP  I      DC  ++ F D +K D L     VNLLNCY+LANNK  ++LIISWMQK   + G FNI+IPG+EIP+W            E      
Subjt:  YPKLPRVIEKARLVDCFMVEIFPDSTK-DLLEGSYFVNLLNCYKLANNKELYKLIISWMQKASCQDGAFNILIPGNEIPEWLVYNNKNG---YEVGSKPS

Query:  KRQLDRIALCVVCGPTDNGRFSMSSSFAMVANVFGTEPYNQELRTKMG-SINAFYVPKMRNLDHVWCFVIPRYESLTRLIEECREIMFQFVLERRHPSQF
           + R ALCVV G ++        SFA++A+V G +  +  L+      I  F V  M+ LDH+W FV+PR  +L R I   +EI F+F+L+  +  Q 
Subjt:  KRQLDRIALCVVCGPTDNGRFSMSSSFAMVANVFGTEPYNQELRTKMG-SINAFYVPKMRNLDHVWCFVIPRYESLTRLIEECREIMFQFVLERRHPSQF

Query:  ALRSNIRMKKCGVRLISMEEEKGAMR---LHTLIRNNKIEL
        ++  N+++K+CGV LI++EEEK AM+    H ++RN  + L
Subjt:  ALRSNIRMKKCGVRLISMEEEKGAMR---LHTLIRNNKIEL

A0A6J1CKI7 TMV resistance protein N-like isoform X16.0e-3941.32Show/hide
Query:  YPKLPRVIEKARLVDCFMVEIFPDSTKDLLEGSYF---VNLLNCYKLANNKELYKLIISWMQKASCQDGAFNILIPGNEIPEWLVYNNKNG---YEVGSK
        +P+LP  I       C  ++  P+ +K  ++ SYF   VNLLNCY+LA+N  L++LI  WM+K   + G FNI+IPG++IP+W            E    
Subjt:  YPKLPRVIEKARLVDCFMVEIFPDSTKDLLEGSYF---VNLLNCYKLANNKELYKLIISWMQKASCQDGAFNILIPGNEIPEWLVYNNKNG---YEVGSK

Query:  PSKRQLDRIALCVVCGPTDNGRFSMSSSFAMVANVFGTEPYNQELRTKMGSINAFYVPKMRNLDHVWCFVIPRYESLTRLIEECREIMFQFVLERRHPSQ
         +   L R ALCVVCGPT+ G   + + FA++A+V G    +  L      +NAF V  MR LDH+W FV+PR +SL R I  C+EI FQF+++  + S+
Subjt:  PSKRQLDRIALCVVCGPTDNGRFSMSSSFAMVANVFGTEPYNQELRTKMGSINAFYVPKMRNLDHVWCFVIPRYESLTRLIEECREIMFQFVLERRHPSQ

Query:  FALRSNIRMKKCGVRLISMEEEKGAMRLHT--LIRNNKIELL
         A   +I +KKCGV LI+MEEEK AM+ +   +I  NK+  L
Subjt:  FALRSNIRMKKCGVRLISMEEEKGAMRLHT--LIRNNKIELL

A0A6J1CL32 TMV resistance protein N-like isoform X26.0e-3941.32Show/hide
Query:  YPKLPRVIEKARLVDCFMVEIFPDSTKDLLEGSYF---VNLLNCYKLANNKELYKLIISWMQKASCQDGAFNILIPGNEIPEWLVYNNKNG---YEVGSK
        +P+LP  I       C  ++  P+ +K  ++ SYF   VNLLNCY+LA+N  L++LI  WM+K   + G FNI+IPG++IP+W            E    
Subjt:  YPKLPRVIEKARLVDCFMVEIFPDSTKDLLEGSYF---VNLLNCYKLANNKELYKLIISWMQKASCQDGAFNILIPGNEIPEWLVYNNKNG---YEVGSK

Query:  PSKRQLDRIALCVVCGPTDNGRFSMSSSFAMVANVFGTEPYNQELRTKMGSINAFYVPKMRNLDHVWCFVIPRYESLTRLIEECREIMFQFVLERRHPSQ
         +   L R ALCVVCGPT+ G   + + FA++A+V G    +  L      +NAF V  MR LDH+W FV+PR +SL R I  C+EI FQF+++  + S+
Subjt:  PSKRQLDRIALCVVCGPTDNGRFSMSSSFAMVANVFGTEPYNQELRTKMGSINAFYVPKMRNLDHVWCFVIPRYESLTRLIEECREIMFQFVLERRHPSQ

Query:  FALRSNIRMKKCGVRLISMEEEKGAMRLHT--LIRNNKIELL
         A   +I +KKCGV LI+MEEEK AM+ +   +I  NK+  L
Subjt:  FALRSNIRMKKCGVRLISMEEEKGAMRLHT--LIRNNKIELL

A0A6J1EBI7 TMV resistance protein N-like4.3e-3738.06Show/hide
Query:  LRYYPKLPRVIEKARLVDCFMVEIFPDSTKDLLEGSYF---VNLLNCYKLANNKELYKLIISWMQKASCQDGAFNILIPGNEIPEWLVYNNKNG---YEV
        L ++P+LP  I +     C  ++ F D +K  ++ SYF   +NL+NC++  +NKEL KLI SWMQK   + GAFNIL+PG+EIP+W            E 
Subjt:  LRYYPKLPRVIEKARLVDCFMVEIFPDSTKDLLEGSYF---VNLLNCYKLANNKELYKLIISWMQKASCQDGAFNILIPGNEIPEWLVYNNKNG---YEV

Query:  GSKPSKRQLDRIALCVVCGPTDNGRFSMSSSFAMVANVFGTEPYNQELRTKMGSINAFYVPKMRNLDHVWCFVIPRYESLTRLIEECREIMFQFVLERRH
                + R ALCV+CGP+ N +  +   F + A+V G +  +  L      + AF V  M+ LDH+W FV+PR  +LTR I  C+EI F+F+L+  +
Subjt:  GSKPSKRQLDRIALCVVCGPTDNGRFSMSSSFAMVANVFGTEPYNQELRTKMGSINAFYVPKMRNLDHVWCFVIPRYESLTRLIEECREIMFQFVLERRH

Query:  PSQFALRSNIRMKKCGVRLISMEEEKGAMRLHT---LIRNNKIELLK
             +  N+ +KKCGV LI+MEEE  AM+ +    +++N    L+K
Subjt:  PSQFALRSNIRMKKCGVRLISMEEEKGAMRLHT---LIRNNKIELLK

A0A6J1I8R5 TMV resistance protein N-like3.6e-3638.06Show/hide
Query:  LRYYPKLPRVIEKARLVDCFMVEIFPDSTKDLLEGSYF---VNLLNCYKLANNKELYKLIISWMQKASCQDGAFNILIPGNEIPEWLVYNNKNG---YEV
        L ++PKLP  I +     C  ++ F D +K  ++ SYF   +NLLNC++  +NK+L+KLI SWMQK   + GAFNIL+PG+EIP+W            E 
Subjt:  LRYYPKLPRVIEKARLVDCFMVEIFPDSTKDLLEGSYF---VNLLNCYKLANNKELYKLIISWMQKASCQDGAFNILIPGNEIPEWLVYNNKNG---YEV

Query:  GSKPSKRQLDRIALCVVCGPTDNGRFSMSSSFAMVANVFGTEPYNQELRTKMGSINAFYVPKMRNLDHVWCFVIPRYESLTRLIEECREIMFQFVLERRH
                + R ALCV+CGP+ N +  +     + A+V G    +         + AF V  M+ LDH+W FV+PR  +LTR I  C+EI F+F+L+  +
Subjt:  GSKPSKRQLDRIALCVVCGPTDNGRFSMSSSFAMVANVFGTEPYNQELRTKMGSINAFYVPKMRNLDHVWCFVIPRYESLTRLIEECREIMFQFVLERRH

Query:  PSQFALRSNIRMKKCGVRLISMEEEKGAMRLHT---LIRNNKIELLK
             +  N+ +KKCGV LI+MEEE  AM+ +    +++N    LLK
Subjt:  PSQFALRSNIRMKKCGVRLISMEEEKGAMRLHT---LIRNNKIELLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCGATATTACCCGAAGCTTCCTCGAGTGATCGAGAAAGCACGGTTAGTTGATTGTTTTATGGTGGAAATTTTTCCGGATTCAACCAAAGATCTTTTGGAGGGTTC
ATATTTCGTGAATCTATTGAATTGTTACAAACTGGCTAACAACAAAGAACTGTATAAGTTGATAATTTCATGGATGCAGAAGGCGTCGTGTCAAGATGGAGCATTCAACA
TCCTAATACCTGGAAATGAGATTCCAGAGTGGTTGGTTTACAACAACAAAAATGGGTATGAAGTGGGATCAAAGCCCTCCAAACGCCAACTTGATCGCATTGCTTTGTGC
GTCGTTTGCGGTCCAACGGATAATGGCCGCTTTTCCATGTCCTCGTCCTTCGCCATGGTTGCAAATGTGTTTGGAACAGAACCTTACAACCAAGAGTTGAGGACTAAAAT
GGGTAGCATTAATGCATTCTACGTTCCGAAAATGAGAAATTTAGACCATGTTTGGTGTTTTGTTATACCTCGATATGAGTCGTTGACAAGATTGATTGAGGAGTGCAGAG
AGATTATGTTTCAGTTCGTACTTGAGAGACGCCATCCTTCTCAGTTTGCACTTCGTTCAAATATCAGAATGAAAAAGTGTGGCGTTCGTTTGATAAGTATGGAAGAAGAG
AAGGGGGCAATGAGATTGCATACCCTTATCAGGAACAACAAGATCGAATTGTTAAAAATGTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCGATATTACCCGAAGCTTCCTCGAGTGATCGAGAAAGCACGGTTAGTTGATTGTTTTATGGTGGAAATTTTTCCGGATTCAACCAAAGATCTTTTGGAGGGTTC
ATATTTCGTGAATCTATTGAATTGTTACAAACTGGCTAACAACAAAGAACTGTATAAGTTGATAATTTCATGGATGCAGAAGGCGTCGTGTCAAGATGGAGCATTCAACA
TCCTAATACCTGGAAATGAGATTCCAGAGTGGTTGGTTTACAACAACAAAAATGGGTATGAAGTGGGATCAAAGCCCTCCAAACGCCAACTTGATCGCATTGCTTTGTGC
GTCGTTTGCGGTCCAACGGATAATGGCCGCTTTTCCATGTCCTCGTCCTTCGCCATGGTTGCAAATGTGTTTGGAACAGAACCTTACAACCAAGAGTTGAGGACTAAAAT
GGGTAGCATTAATGCATTCTACGTTCCGAAAATGAGAAATTTAGACCATGTTTGGTGTTTTGTTATACCTCGATATGAGTCGTTGACAAGATTGATTGAGGAGTGCAGAG
AGATTATGTTTCAGTTCGTACTTGAGAGACGCCATCCTTCTCAGTTTGCACTTCGTTCAAATATCAGAATGAAAAAGTGTGGCGTTCGTTTGATAAGTATGGAAGAAGAG
AAGGGGGCAATGAGATTGCATACCCTTATCAGGAACAACAAGATCGAATTGTTAAAAATGTCGTAA
Protein sequenceShow/hide protein sequence
MLRYYPKLPRVIEKARLVDCFMVEIFPDSTKDLLEGSYFVNLLNCYKLANNKELYKLIISWMQKASCQDGAFNILIPGNEIPEWLVYNNKNGYEVGSKPSKRQLDRIALC
VVCGPTDNGRFSMSSSFAMVANVFGTEPYNQELRTKMGSINAFYVPKMRNLDHVWCFVIPRYESLTRLIEECREIMFQFVLERRHPSQFALRSNIRMKKCGVRLISMEEE
KGAMRLHTLIRNNKIELLKMS