; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003500 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003500
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionAnkyrin repeat family protein
Genome locationChr08:2360389..2365508
RNA-Seq ExpressionHG10003500
SyntenyHG10003500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH05192.1 Ankyrin repeat family protein [Prunus dulcis]3.0e-0541.56Show/hide
Query:  IKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
        + L KAA  GDWKTA SI++ D  +L++ +T+  + VLHI A  KH  F+K LVQ+  +E     + K +  L+ AA
Subjt:  IKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
XP_022137347.1 uncharacterized protein LOC111008827 isoform X1 [Momordica charantia]9.3e-0729.26Show/hide
Query:  IVLSPKSLTTHLLSVEKRLEDNVEKRL-EVISEDLADQRGILQKLLEHHETA-GGILSLSKRTEKKKDYSEASSSTPTN---------------VKLAHY
        ++   + L +HL         N E+ +   I + L + R    K L+H + A  GI     R E+  + + A  ST  N                ++ H 
Subjt:  IVLSPKSLTTHLLSVEKRLEDNVEKRL-EVISEDLADQRGILQKLLEHHETA-GGILSLSKRTEKKKDYSEASSSTPTN---------------VKLAHY

Query:  --------EQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
                  +++L +AA  GDWKTA SII+ D S L+  +   GD  LHI    KH SF++NLVQ+ SS      N K +  L  A+
Subjt:  --------EQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
XP_022137352.1 uncharacterized protein LOC111008827 isoform X2 [Momordica charantia]9.3e-0729.26Show/hide
Query:  IVLSPKSLTTHLLSVEKRLEDNVEKRL-EVISEDLADQRGILQKLLEHHETA-GGILSLSKRTEKKKDYSEASSSTPTN---------------VKLAHY
        ++   + L +HL         N E+ +   I + L + R    K L+H + A  GI     R E+  + + A  ST  N                ++ H 
Subjt:  IVLSPKSLTTHLLSVEKRLEDNVEKRL-EVISEDLADQRGILQKLLEHHETA-GGILSLSKRTEKKKDYSEASSSTPTN---------------VKLAHY

Query:  --------EQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
                  +++L +AA  GDWKTA SII+ D S L+  +   GD  LHI    KH SF++NLVQ+ SS      N K +  L  A+
Subjt:  --------EQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
XP_022159355.1 uncharacterized protein LOC111025772, partial [Momordica charantia]3.5e-0640.66Show/hide
Query:  STPTNVKLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
        + P +       + ++L KAA  GDWKTA SI   D S L+  L   GD  LHI A  KH SF+ NLVQ+ SS      N + +  LT A+
Subjt:  STPTNVKLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
XP_023542596.1 ankyrin repeat-containing protein ITN1-like [Cucurbita pepo subsp. pepo]3.0e-0540Show/hide
Query:  KLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
        K A+    + L +AA +GDWK A SI + D S ++  +T   +  LHI A  KH  F++NLV++TSS    A N K +  L  AA
Subjt:  KLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
TrEMBL top hitse value%identityAlignment
A0A4Y1RLF8 Ankyrin repeat family protein1.4e-0541.56Show/hide
Query:  IKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
        + L KAA  GDWKTA SI++ D  +L++ +T+  + VLHI A  KH  F+K LVQ+  +E     + K +  L+ AA
Subjt:  IKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
A0A6J1C6Z9 uncharacterized protein LOC111008827 isoform X14.5e-0729.26Show/hide
Query:  IVLSPKSLTTHLLSVEKRLEDNVEKRL-EVISEDLADQRGILQKLLEHHETA-GGILSLSKRTEKKKDYSEASSSTPTN---------------VKLAHY
        ++   + L +HL         N E+ +   I + L + R    K L+H + A  GI     R E+  + + A  ST  N                ++ H 
Subjt:  IVLSPKSLTTHLLSVEKRLEDNVEKRL-EVISEDLADQRGILQKLLEHHETA-GGILSLSKRTEKKKDYSEASSSTPTN---------------VKLAHY

Query:  --------EQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
                  +++L +AA  GDWKTA SII+ D S L+  +   GD  LHI    KH SF++NLVQ+ SS      N K +  L  A+
Subjt:  --------EQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
A0A6J1C813 uncharacterized protein LOC111008827 isoform X24.5e-0729.26Show/hide
Query:  IVLSPKSLTTHLLSVEKRLEDNVEKRL-EVISEDLADQRGILQKLLEHHETA-GGILSLSKRTEKKKDYSEASSSTPTN---------------VKLAHY
        ++   + L +HL         N E+ +   I + L + R    K L+H + A  GI     R E+  + + A  ST  N                ++ H 
Subjt:  IVLSPKSLTTHLLSVEKRLEDNVEKRL-EVISEDLADQRGILQKLLEHHETA-GGILSLSKRTEKKKDYSEASSSTPTN---------------VKLAHY

Query:  --------EQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
                  +++L +AA  GDWKTA SII+ D S L+  +   GD  LHI    KH SF++NLVQ+ SS      N K +  L  A+
Subjt:  --------EQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
A0A6J1DYH0 uncharacterized protein LOC1110257721.7e-0640.66Show/hide
Query:  STPTNVKLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
        + P +       + ++L KAA  GDWKTA SI   D S L+  L   GD  LHI A  KH SF+ NLVQ+ SS      N + +  LT A+
Subjt:  STPTNVKLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
A0A6J1GTF5 ankyrin repeat-containing protein ITN1-like2.5e-0540Show/hide
Query:  KLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
        K A+    + L +AA +GDWK A SI + D S ++  +T   +  LHI A  KH  F++NLVQ+TS     A N K +  L  AA
Subjt:  KLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNAMNRKVDIPLTNAA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G54070.1 Ankyrin repeat family protein9.2e-0527.56Show/hide
Query:  GILSLSKRTEKKK---DYSEASSSTPTN--VKLAHYEQHIK-----------LRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFL
        GIL   K+  ++    +  E S S+P      L + E H             + KA   GDWKTA ++I+     +   +T   +I LHI    KH  F+
Subjt:  GILSLSKRTEKKK---DYSEASSSTPTN--VKLAHYEQHIK-----------LRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFL

Query:  KNLVQITSSEHFNAMNRKVDIPLTNAA
        +NL++       +  N+  + PL+ AA
Subjt:  KNLVQITSSEHFNAMNRKVDIPLTNAA
AT5G35830.1 Ankyrin repeat family protein3.5e-0437.04Show/hide
Query:  IKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLV
        ++L +AA +GDWK A  II     ++   +T   + VLHI    KH  F++NL+
Subjt:  IKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGTCGCCCAGCAACCCACGCCGCCGCCAATCCCCGTCGCCCTTCATCCCTCGGTCGTTCGTCGACGCTTCACGTCTCTGAGCGTCGTTGTTGTTGGAATTTTAGT
TTTTGATATGATATTCACATTGCAAGTGCCCTGTCTGAGATTTTCAAACACGGTTAAAGAAAATGGGGAAATCACTTACTCCAACGAAGAGGTAGAGCAAATCGTCTTAT
CACCAAAGTCCTTGACGACACACTTGCTATCTGTTGAGAAGAGACTAGAGGATAATGTTGAGAAGAGATTAGAGGTTATATCAGAAGACTTGGCTGACCAAAGGGGAATT
CTTCAAAAACTTCTTGAACACCATGAAACAGCAGGGGGCATTCTCAGTCTATCTAAAAGAACTGAGAAAAAGAAAGATTATTCAGAGGCGTCCTCTTCAACGCCAACAAA
TGTTAAGCTTGCACACTATGAACAACATATTAAGTTACGCAAAGCTGCATATGAGGGTGATTGGAAGACTGCTTGTTCGATCATTAATTCAGACATATCGATGCTTAGCA
GTGTCCTTACACAAGTTGGGGATATAGTTCTACATATTGTTGCTTGCACGAAGCATCATTCCTTTCTGAAAAATCTAGTTCAAATTACGTCCTCGGAGCACTTCAATGCC
ATGAATAGAAAAGTAGATATCCCTTTAACGAATGCTGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGTCGCCCAGCAACCCACGCCGCCGCCAATCCCCGTCGCCCTTCATCCCTCGGTCGTTCGTCGACGCTTCACGTCTCTGAGCGTCGTTGTTGTTGGAATTTTAGT
TTTTGATATGATATTCACATTGCAAGTGCCCTGTCTGAGATTTTCAAACACGGTTAAAGAAAATGGGGAAATCACTTACTCCAACGAAGAGGTAGAGCAAATCGTCTTAT
CACCAAAGTCCTTGACGACACACTTGCTATCTGTTGAGAAGAGACTAGAGGATAATGTTGAGAAGAGATTAGAGGTTATATCAGAAGACTTGGCTGACCAAAGGGGAATT
CTTCAAAAACTTCTTGAACACCATGAAACAGCAGGGGGCATTCTCAGTCTATCTAAAAGAACTGAGAAAAAGAAAGATTATTCAGAGGCGTCCTCTTCAACGCCAACAAA
TGTTAAGCTTGCACACTATGAACAACATATTAAGTTACGCAAAGCTGCATATGAGGGTGATTGGAAGACTGCTTGTTCGATCATTAATTCAGACATATCGATGCTTAGCA
GTGTCCTTACACAAGTTGGGGATATAGTTCTACATATTGTTGCTTGCACGAAGCATCATTCCTTTCTGAAAAATCTAGTTCAAATTACGTCCTCGGAGCACTTCAATGCC
ATGAATAGAAAAGTAGATATCCCTTTAACGAATGCTGCATGA
Protein sequenceShow/hide protein sequence
MSVAQQPTPPPIPVALHPSVVRRRFTSLSVVVVGILVFDMIFTLQVPCLRFSNTVKENGEITYSNEEVEQIVLSPKSLTTHLLSVEKRLEDNVEKRLEVISEDLADQRGI
LQKLLEHHETAGGILSLSKRTEKKKDYSEASSSTPTNVKLAHYEQHIKLRKAAYEGDWKTACSIINSDISMLSSVLTQVGDIVLHIVACTKHHSFLKNLVQITSSEHFNA
MNRKVDIPLTNAA