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HG10003545 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003545
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description30S ribosomal protein S7, chloroplastic
Genome locationChr08:3029112..3029483
RNA-Seq ExpressionHG10003545
SyntenyHG10003545
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015979 - photosynthesis (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009539 - photosystem II reaction center (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000235 - Ribosomal protein S5/S7
IPR005717 - Ribosomal protein S7, bacterial/organellar-type
IPR023798 - Ribosomal protein S7 domain
IPR036823 - Ribosomal protein S7 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QFQ46751.1 ribosomal protein S7 [Heteroblemma serpens]1.8e-4992.04Show/hide
Query:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
        +Y+A ++IH++  TNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
Subjt:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH

Query:  RMAEANRAFAHFR
        RMAEANRAFAHFR
Subjt:  RMAEANRAFAHFR

RYR38870.1 hypothetical protein Ahy_A09g044141 [Arachis hypogaea]1.2e-4891.15Show/hide
Query:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
        +Y+A ++I ++  TNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
Subjt:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH

Query:  RMAEANRAFAHFR
        RMAEANRAFAHFR
Subjt:  RMAEANRAFAHFR

YP_005088851.1 ribosomal protein S7 [Pongamia pinnata]1.5e-4891.15Show/hide
Query:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
        +Y+A ++I ++  TNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
Subjt:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH

Query:  RMAEANRAFAHFR
        RMAEANRAFAHFR
Subjt:  RMAEANRAFAHFR

YP_009460211.1 ribosomal protein S7 [Dalbergia hainanensis]1.5e-4891.15Show/hide
Query:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
        +Y+A ++I ++  TNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
Subjt:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH

Query:  RMAEANRAFAHFR
        RMAEANRAFAHFR
Subjt:  RMAEANRAFAHFR

YP_009870081.1 ribosomal protein S7 [Bonnetia paniculata]1.5e-4891.15Show/hide
Query:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
        +Y+A ++I ++  TNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
Subjt:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH

Query:  RMAEANRAFAHFR
        RMAEANRAFAHFR
Subjt:  RMAEANRAFAHFR

TrEMBL top hitse value%identityAlignment
A0A0N6WC30 30S ribosomal protein S7, chloroplastic7.3e-4991.15Show/hide
Query:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
        +Y+A ++I ++  TNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
Subjt:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH

Query:  RMAEANRAFAHFR
        RMAEANRAFAHFR
Subjt:  RMAEANRAFAHFR

A0A445BJL5 Ribosomal protein S75.6e-4991.15Show/hide
Query:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
        +Y+A ++I ++  TNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
Subjt:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH

Query:  RMAEANRAFAHFR
        RMAEANRAFAHFR
Subjt:  RMAEANRAFAHFR

A0A5P8GX06 30S ribosomal protein S7, chloroplastic8.6e-5092.04Show/hide
Query:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
        +Y+A ++IH++  TNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
Subjt:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH

Query:  RMAEANRAFAHFR
        RMAEANRAFAHFR
Subjt:  RMAEANRAFAHFR

A0A7G9M8A0 30S ribosomal protein S7, chloroplastic7.3e-4991.15Show/hide
Query:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
        +Y+A ++I ++  TNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
Subjt:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH

Query:  RMAEANRAFAHFR
        RMAEANRAFAHFR
Subjt:  RMAEANRAFAHFR

T1QK78 30S ribosomal protein S7, chloroplastic7.3e-4991.15Show/hide
Query:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
        +Y+A ++I ++  TNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
Subjt:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH

Query:  RMAEANRAFAHFR
        RMAEANRAFAHFR
Subjt:  RMAEANRAFAHFR

SwissProt top hitse value%identityAlignment
A4QJG0 30S ribosomal protein S7, chloroplastic2.6e-5191.15Show/hide
Query:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
        +Y+A ++I ++  TNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
Subjt:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH

Query:  RMAEANRAFAHFR
        RMAEANRAFAHFR
Subjt:  RMAEANRAFAHFR

A4QJP4 30S ribosomal protein S7, chloroplastic2.6e-5191.15Show/hide
Query:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
        +Y+A ++I ++  TNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
Subjt:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH

Query:  RMAEANRAFAHFR
        RMAEANRAFAHFR
Subjt:  RMAEANRAFAHFR

B1NWJ5 30S ribosomal protein S7, chloroplastic2.0e-5191.15Show/hide
Query:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
        +Y+A ++I ++  TNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
Subjt:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH

Query:  RMAEANRAFAHFR
        RMAEANRAFAHFR
Subjt:  RMAEANRAFAHFR

Q49KT8 30S ribosomal protein S7, chloroplastic2.0e-5191.15Show/hide
Query:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
        +Y+A ++I ++  TNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
Subjt:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH

Query:  RMAEANRAFAHFR
        RMAEANRAFAHFR
Subjt:  RMAEANRAFAHFR

Q9B1A1 30S ribosomal protein S7, chloroplastic2.0e-5191.15Show/hide
Query:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
        +Y+A ++I ++  TNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
Subjt:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH

Query:  RMAEANRAFAHFR
        RMAEANRAFAHFR
Subjt:  RMAEANRAFAHFR

Arabidopsis top hitse value%identityAlignment
AT2G07696.1 Ribosomal protein S7p/S5e family protein7.3e-0931.9Show/hide
Query:  ERIHR--RMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSGDAIRKKE
        +  HR  R   + + ++  A+  + P   V    V G+ + VP  +   + + LAIRW+L A+ K   R +++++S      +E++DA +  G A RK+E
Subjt:  ERIHR--RMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSGDAIRKKE

Query:  ETHRMAEANRAFAHFR
          H +A  NR+FAHFR
Subjt:  ETHRMAEANRAFAHFR

AT2G37270.1 ribosomal protein 5B1.9e-0435.96Show/hide
Query:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVG--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD--AI
        V  A E IH     NP+ V+  AI    P     A R+G  G   +  ++I   +    AI  L   +R+   RN   +A  L+ EL++AAKGS +  AI
Subjt:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVG--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD--AI

Query:  RKKEETHRMAEANR
        +KK+E  R+A+ANR
Subjt:  RKKEETHRMAEANR

ATCG00900.1 Ribosomal protein S7p/S5e family protein1.8e-5291.15Show/hide
Query:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
        +Y+A ++I ++  TNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
Subjt:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH

Query:  RMAEANRAFAHFR
        RMAEANRAFAHFR
Subjt:  RMAEANRAFAHFR

ATCG01240.1 ribosomal protein S71.8e-5291.15Show/hide
Query:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
        +Y+A ++I ++  TNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
Subjt:  VYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH

Query:  RMAEANRAFAHFR
        RMAEANRAFAHFR
Subjt:  RMAEANRAFAHFR

ATMG01270.1 mitochondrial ribosomal protein S77.3e-0931.9Show/hide
Query:  ERIHR--RMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSGDAIRKKE
        +  HR  R   + + ++  A+  + P   V    V G+ + VP  +   + + LAIRW+L A+ K   R +++++S      +E++DA +  G A RK+E
Subjt:  ERIHR--RMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSGDAIRKKE

Query:  ETHRMAEANRAFAHFR
          H +A  NR+FAHFR
Subjt:  ETHRMAEANRAFAHFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGCTCCCATAGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGAATTCACCGCCGTATGGCAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGT
AACTCCCGATATAGCAGTAAAGGCAAGACGTGTAGGCGGATCAACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAG
GGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCAT
AGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGCTCCCATAGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGAATTCACCGCCGTATGGCAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGT
AACTCCCGATATAGCAGTAAAGGCAAGACGTGTAGGCGGATCAACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAG
GGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCAT
AGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA
Protein sequenceShow/hide protein sequence
MASSHSVTGGVYKARERIHRRMATNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETH
RMAEANRAFAHFR