; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003584 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003584
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRNA-binding protein 24
Genome locationChr08:3728325..3733306
RNA-Seq ExpressionHG10003584
SyntenyHG10003584
Gene Ontology termsGO:0030154 - cell differentiation (biological process)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR037366 - BOULE/DAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011656046.1 RNA-binding protein 24 isoform X1 [Cucumis sativus]5.3e-14595.31Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDA+PVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGIL
        STPKHEKKKWELT GGGGG  NFRVLSS FQ+GFGGNVGSAFHSP TTFPHYAIQQGIPYNLYGYSSYSPDY+YPTSYYNVYGGATAQYPMYGTGPGGIL
Subjt:  STPKHEKKKWELTGGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGIL

Query:  SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGLLL
        SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSA INSTAATTFPQHYAAPPMSLPPTPPTL SG+ +
Subjt:  SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGLLL

XP_016902397.1 PREDICTED: RNA-binding protein 24 isoform X2 [Cucumis melo]3.4e-14496.34Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDA+PVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGIL
        STPKHEKKKWELT GGGGG  NFRVLSS FQ+GFGGNVGSAFHSP TTFPHYAIQQGIPYNLYGYSSYSPDY+YPTSYYNVYGGATAQYPMYGTGPGGIL
Subjt:  STPKHEKKKWELTGGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGIL

Query:  SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSS
        SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSA INSTAATTFPQHYAAPPMSLPPTPPTL S
Subjt:  SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSS

XP_022930178.1 RNA-binding protein 38 isoform X1 [Cucurbita moschata]3.0e-14091.46Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSN+ASQFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSG
        STPKHEKKKWELT  GGGGGRNFRVLSSFQTGFGGNVGSAFHS  TFPHYAI QGIPYNLYGYSSYSPDY+YPTSYYNVYGGATAQYPMYGTGPGGILSG
Subjt:  STPKHEKKKWELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSG

Query:  AAAAAAAFYPYFQFGEGSGG------GGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGLLL
        AAAAAAAFYPYFQFGEGSGG      GGSGQQGYGVQYPHHL QYSA +NST  TTFPQHYAAPPMSLPPTPPTL SG+ +
Subjt:  AAAAAAAFYPYFQFGEGSGG------GGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGLLL

XP_038890037.1 RNA-binding protein 24 isoform X1 [Benincasa hispida]6.3e-14694.29Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGG----GGRNFRVLSS-FQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPG
        STPKHEKKKWELTGGGGG    GGRNFRVLSS FQTGFGGNVGSAFHSPTTFPHYAI QGIPYNLYGYSSYSPDY+YPTSYYNVYGGATAQYPMYGTGPG
Subjt:  STPKHEKKKWELTGGGGG----GGRNFRVLSS-FQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPG

Query:  GILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGLLL
        GILSGAAAAAAAFYPYFQFGEGSGGGGSGQ GYGVQYPHHLFQYS  INS+AATTF QHYAAPPMSLPPTPPTL SG+ +
Subjt:  GILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGLLL

XP_038890038.1 RNA-binding protein 24 isoform X2 [Benincasa hispida]5.3e-14595.29Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGG----GGRNFRVLSS-FQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPG
        STPKHEKKKWELTGGGGG    GGRNFRVLSS FQTGFGGNVGSAFHSPTTFPHYAI QGIPYNLYGYSSYSPDY+YPTSYYNVYGGATAQYPMYGTGPG
Subjt:  STPKHEKKKWELTGGGGG----GGRNFRVLSS-FQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPG

Query:  GILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSS
        GILSGAAAAAAAFYPYFQFGEGSGGGGSGQ GYGVQYPHHLFQYS  INS+AATTF QHYAAPPMSLPPTPPTL S
Subjt:  GILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSS

TrEMBL top hitse value%identityAlignment
A0A0A0KUN6 RRM domain-containing protein1.7e-14496.34Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDA+PVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGIL
        STPKHEKKKWELT GGGGG  NFRVLSS FQ+GFGGNVGSAFHSP TTFPHYAIQQGIPYNLYGYSSYSPDY+YPTSYYNVYGGATAQYPMYGTGPGGIL
Subjt:  STPKHEKKKWELTGGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGIL

Query:  SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSS
        SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSA INSTAATTFPQHYAAPPMSLPPTPPTL S
Subjt:  SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSS

A0A1S4E2E1 RNA-binding protein 24 isoform X12.6e-14595.31Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDA+PVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGIL
        STPKHEKKKWELT GGGGG  NFRVLSS FQ+GFGGNVGSAFHSP TTFPHYAIQQGIPYNLYGYSSYSPDY+YPTSYYNVYGGATAQYPMYGTGPGGIL
Subjt:  STPKHEKKKWELTGGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGIL

Query:  SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGLLL
        SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSA INSTAATTFPQHYAAPPMSLPPTPPTL SG+ +
Subjt:  SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGLLL

A0A1S4E2E6 RNA-binding protein 24 isoform X21.7e-14496.34Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDA+PVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGIL
        STPKHEKKKWELT GGGGG  NFRVLSS FQ+GFGGNVGSAFHSP TTFPHYAIQQGIPYNLYGYSSYSPDY+YPTSYYNVYGGATAQYPMYGTGPGGIL
Subjt:  STPKHEKKKWELTGGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGIL

Query:  SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSS
        SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSA INSTAATTFPQHYAAPPMSLPPTPPTL S
Subjt:  SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSS

A0A6J1EUB1 RNA-binding protein 38 isoform X11.5e-14091.46Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSN+ASQFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSG
        STPKHEKKKWELT  GGGGGRNFRVLSSFQTGFGGNVGSAFHS  TFPHYAI QGIPYNLYGYSSYSPDY+YPTSYYNVYGGATAQYPMYGTGPGGILSG
Subjt:  STPKHEKKKWELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSG

Query:  AAAAAAAFYPYFQFGEGSGG------GGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGLLL
        AAAAAAAFYPYFQFGEGSGG      GGSGQQGYGVQYPHHL QYSA +NST  TTFPQHYAAPPMSLPPTPPTL SG+ +
Subjt:  AAAAAAAFYPYFQFGEGSGG------GGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGLLL

A0A6J1IGG9 RNA-binding protein 38 isoform X11.5e-14091.46Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSN+ASQFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSG
        STPKHEKKKWELT  GGGGGRNFRVLSSFQTGFGGNVGSAFHS  TFPHYAI QGIPYNLYGYSSYSPDY+YPTSYYNVYGGATAQYPMYGTGPGGILSG
Subjt:  STPKHEKKKWELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSG

Query:  AAAAAAAFYPYFQFGEGSGG------GGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGLLL
        AAAAAAAFYPYFQFGEGSGG      GGSGQQGYGVQYPHHL QYSA +NST  TTFPQHYAAPPMSLPPTPPTL SG+ +
Subjt:  AAAAAAAFYPYFQFGEGSGG------GGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGLLL

SwissProt top hitse value%identityAlignment
Q6GQD3 RNA-binding protein 24-A7.0e-2337.5Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG   +KP           
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGGGRNFRVLSSFQTGFGGNV----GSAFHSPTTFP-HYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAA
                    R++   Q GF   V     +    P   P HY   Q             P  +  TS Y  Y   +A Y  Y          AAAAAA
Subjt:  LTGGGGGGGRNFRVLSSFQTGFGGNV----GSAFHSPTTFP-HYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAA

Query:  AFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQH
        A+  Y      +  G     GYG   P  L   + G  + AA  F Q+
Subjt:  AFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQH

Q6P8A7 RNA-binding protein 242.4e-2338.62Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG   +KP           
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQG--IPY-NLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF
        +   G   G      +  Q  FG        +   +PH  +Q G  IP+      +S SP   Y ++ Y       AQY           S AAAAAAA+
Subjt:  LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQG--IPY-NLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF

Query:  YPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQH
          Y      +  G     GYG   P  L   + G  + AA  F Q+
Subjt:  YPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQH

Q76LC6 RNA-binding protein 244.1e-2337.6Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTTYTK+FVGGL + T   +++KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG   +KP           
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQ--GIP-YNLYGYSSYSPDYSYP------------TSYYNVYGGATAQYPMYGTGPGG
                    RV+   Q GF       F  P   P + IQ+  GIP + +Y  +   P    P            + Y +  G A AQY    T    
Subjt:  LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQ--GIP-YNLYGYSSYSPDYSYP------------TSYYNVYGGATAQYPMYGTGPGG

Query:  ILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQH
            AAAAA   YPY      +G   +   GY +Q P  L   + G  + AA  F Q+
Subjt:  ILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQH

Q9I8B3 RNA-binding protein 24-B9.1e-2338.21Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG   +KP   +       
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQG--IPY-NLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF
                G  F V            G   H    +P   +QQG  IP+      +S SP   Y ++ Y       AQY             AAAAAAA+
Subjt:  LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQG--IPY-NLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF

Query:  YPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQH
          Y      +  G     GYG   P  L   + G  + AA  F Q+
Subjt:  YPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQH

Q9M1S3 Probable RNA-binding protein ARP16.8e-2637.5Show/hide
Query:  TPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPS
        T +N+   FGDT  TKVFVGGLAW+THK+ M  +F ++GDILEAV+I+DK T RSKGYGFVTF++  AA RAC D+ P+I+GRRANCNLASLG +  K  
Subjt:  TPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPS

Query:  TPKHEKKKWELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQ----QGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGI
        T    ++      G   G R      +     G +  S ++ P+ F +   Q    Q +P+  YGY S    Y  P   +N   G      M G      
Subjt:  TPKHEKKKWELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQ----QGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGI

Query:  LSGAAAAAAAFYPYFQFGEG--SGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPP
            +     +Y +  +G G    G  S    +   YP+H  Q         A  FPQ   + P+S   TPP
Subjt:  LSGAAAAAAAFYPYFQFGEG--SGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPP

Arabidopsis top hitse value%identityAlignment
AT1G22910.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.6e-6256.81Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW
        GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA  ACVDA PVIDGRRANCNLASLG+QRSKPSTP H     
Subjt:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW

Query:  ELTGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDY-SYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAA
            GGGG   N RV +S+ QTGFG         P TF HY     +P NL+GYS YSPDY S+PT+ Y +YG  +  QY +YG     GG L+ AAA+A
Subjt:  ELTGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDY-SYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAA

Query:  AAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSL
          FYP        GG G  Q      + HHL  Y+           P HY+ P  S+
Subjt:  AAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSL

AT1G22910.2 RNA-binding (RRM/RBD/RNP motifs) family protein4.6e-6256.81Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW
        GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA  ACVDA PVIDGRRANCNLASLG+QRSKPSTP H     
Subjt:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW

Query:  ELTGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDY-SYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAA
            GGGG   N RV +S+ QTGFG         P TF HY     +P NL+GYS YSPDY S+PT+ Y +YG  +  QY +YG     GG L+ AAA+A
Subjt:  ELTGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDY-SYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAA

Query:  AAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSL
          FYP        GG G  Q      + HHL  Y+           P HY+ P  S+
Subjt:  AAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSL

AT1G22910.3 RNA-binding (RRM/RBD/RNP motifs) family protein4.6e-6256.81Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW
        GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA  ACVDA PVIDGRRANCNLASLG+QRSKPSTP H     
Subjt:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW

Query:  ELTGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDY-SYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAA
            GGGG   N RV +S+ QTGFG         P TF HY     +P NL+GYS YSPDY S+PT+ Y +YG  +  QY +YG     GG L+ AAA+A
Subjt:  ELTGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDY-SYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAA

Query:  AAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSL
          FYP        GG G  Q      + HHL  Y+           P HY+ P  S+
Subjt:  AAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSL

AT1G33470.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.0e-6958.91Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +P+AA +ACVD APVIDGRRANCNLA+ GVQRSKPS+P H      
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPY-NLYGYSSYSPDYSYPT-SYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFY
            G  GGR  +V S F+T F G   +A  SP  F HY     +PY N +G+SSYS DY+YPT SYYNVYGGATAQ+PMYG+GP  +   AAA AA FY
Subjt:  LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPY-NLYGYSSYSPDYSYPT-SYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFY

Query:  PYFQFGEGSGGGGSGQQGYG-VQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTP
        PY QF EG+G       GY  + YP+H+F YSA         +P H+   P+SL P+P
Subjt:  PYFQFGEGSGGGGSGQQGYG-VQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTP

AT1G33470.2 RNA-binding (RRM/RBD/RNP motifs) family protein4.1e-7159.14Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +P+AA +ACVD APVIDGRRANCNLA+ GVQRSKPS+P H      
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPY-NLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYP
            G  GGR  +V S F+T F G   +A  SP  F HY     +PY N +G+SSYS DY+YPTSYYNVYGGATAQ+PMYG+GP  +   AAA AA FYP
Subjt:  LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPY-NLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYP

Query:  YFQFGEGSGGGGSGQQGYG-VQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTP
        Y QF EG+G       GY  + YP+H+F YSA         +P H+   P+SL P+P
Subjt:  YFQFGEGSGGGGSGQQGYG-VQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCATCTAACTTGGCAAGTCAGTTTGGAGATACCACTTACACAAAGGTTTTTGTGGGTGGTTTGGCTTGGGAGACTCACAAAGATACCATGAAGAAATACTTTGA
ACAATTTGGCGATATCTTGGAGGCTGTTGTTATTACCGACAAGGCCACTGGACGATCCAAAGGCTATGGATTTGTCACGTTCCGAGAACCCGATGCAGCCATGAGAGCTT
GTGTTGATGCTGCTCCGGTCATCGACGGCCGGAGAGCCAATTGTAATCTTGCTTCTCTTGGTGTTCAACGATCCAAACCCTCCACGCCTAAACACGAGAAAAAGAAATGG
GAATTGACAGGAGGAGGAGGAGGTGGAGGAAGAAATTTTAGGGTATTGAGCTCTTTCCAGACTGGATTTGGAGGGAATGTTGGATCAGCTTTTCATTCACCAACAACTTT
CCCTCATTATGCTATCCAGCAAGGGATCCCTTACAATCTCTATGGGTACTCTTCCTATTCGCCTGACTACAGTTACCCTACGAGCTATTACAATGTGTATGGCGGGGCAA
CTGCACAGTATCCCATGTACGGTACGGGACCCGGCGGCATATTGAGCGGAGCGGCAGCAGCAGCGGCGGCATTCTACCCTTATTTTCAATTTGGGGAAGGAAGCGGTGGC
GGCGGTTCGGGACAGCAAGGGTATGGGGTTCAGTACCCTCACCATCTGTTTCAGTACTCGGCGGGGATTAATTCAACTGCTGCGACAACTTTCCCTCAGCATTATGCTGC
TCCTCCTATGTCTCTGCCTCCCACACCCCCCACTTTGTCATCAGGACTTCTACTAAGATTCAGTTCTTCACCAGCTGCTCCTTTGCAGCTGCTTGAAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCCATCTAACTTGGCAAGTCAGTTTGGAGATACCACTTACACAAAGGTTTTTGTGGGTGGTTTGGCTTGGGAGACTCACAAAGATACCATGAAGAAATACTTTGA
ACAATTTGGCGATATCTTGGAGGCTGTTGTTATTACCGACAAGGCCACTGGACGATCCAAAGGCTATGGATTTGTCACGTTCCGAGAACCCGATGCAGCCATGAGAGCTT
GTGTTGATGCTGCTCCGGTCATCGACGGCCGGAGAGCCAATTGTAATCTTGCTTCTCTTGGTGTTCAACGATCCAAACCCTCCACGCCTAAACACGAGAAAAAGAAATGG
GAATTGACAGGAGGAGGAGGAGGTGGAGGAAGAAATTTTAGGGTATTGAGCTCTTTCCAGACTGGATTTGGAGGGAATGTTGGATCAGCTTTTCATTCACCAACAACTTT
CCCTCATTATGCTATCCAGCAAGGGATCCCTTACAATCTCTATGGGTACTCTTCCTATTCGCCTGACTACAGTTACCCTACGAGCTATTACAATGTGTATGGCGGGGCAA
CTGCACAGTATCCCATGTACGGTACGGGACCCGGCGGCATATTGAGCGGAGCGGCAGCAGCAGCGGCGGCATTCTACCCTTATTTTCAATTTGGGGAAGGAAGCGGTGGC
GGCGGTTCGGGACAGCAAGGGTATGGGGTTCAGTACCCTCACCATCTGTTTCAGTACTCGGCGGGGATTAATTCAACTGCTGCGACAACTTTCCCTCAGCATTATGCTGC
TCCTCCTATGTCTCTGCCTCCCACACCCCCCACTTTGTCATCAGGACTTCTACTAAGATTCAGTTCTTCACCAGCTGCTCCTTTGCAGCTGCTTGAAGAATAA
Protein sequenceShow/hide protein sequence
MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW
ELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNLYGYSSYSPDYSYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGG
GGSGQQGYGVQYPHHLFQYSAGINSTAATTFPQHYAAPPMSLPPTPPTLSSGLLLRFSSSPAAPLQLLEE