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HG10003603 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003603
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr08:3979218..3979706
RNA-Seq ExpressionHG10003603
SyntenyHG10003603
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031959.1 hypothetical protein E6C27_scaffold134G00410 [Cucumis melo var. makuwa]1.7e-0761.82Show/hide
Query:  IENNNEFESYNEEEENLDPTITTNAEEVEIDDDGSDLEQPPIGLFGVHDVLDAFN
        IE+ N+FE+ NEE+   D TIT  AE+ E+DDDGSDL+QP + LFGVHDV +AFN
Subjt:  IENNNEFESYNEEEENLDPTITTNAEEVEIDDDGSDLEQPPIGLFGVHDVLDAFN

TYK18693.1 hypothetical protein E5676_scaffold481G00410 [Cucumis melo var. makuwa]3.5e-1358.33Show/hide
Query:  MSNAPSSPNTVELYISQPKFSSPARMREIENNNEFESYNEEE-ENLDPTITTNAEEVEIDDDGSDLEQPPIGLFGVHDVLDAFN
        MSNAP  P+ VELYISQP  SS A +  IE  NEF++ N E+ +  DPTI TN E  E+DDD SD++QP   LFGVHDV +AFN
Subjt:  MSNAPSSPNTVELYISQPKFSSPARMREIENNNEFESYNEEE-ENLDPTITTNAEEVEIDDDGSDLEQPPIGLFGVHDVLDAFN

XP_038877923.1 uncharacterized protein LOC120070133 [Benincasa hispida]4.0e-4158.39Show/hide
Query:  MNGNIGNGPTGIEYDGQPCLHINILRQTEFNAFIETLYDALSIDKNDGIEVKFRYGSYVARSTFYISISLRSEHNLRFMMSNAPSSPNTVELYISQPKFS
        M+GNI NGP+GIEYD QP L IN+ RQ +FN  I+  YDA SI+++D +EV FRYGSYVARSTF+I ISLRS+ +++FMMSNAP  PN VELYISQP   
Subjt:  MNGNIGNGPTGIEYDGQPCLHINILRQTEFNAFIETLYDALSIDKNDGIEVKFRYGSYVARSTFYISISLRSEHNLRFMMSNAPSSPNTVELYISQPKFS

Query:  SPARMREIENNNEFESYNEEEENLDPTITTNAEEVEIDDDGSDLEQPPIGLFGVHDVLDAF
        SP   RE     E ES+  E+E+ DPTI TN EEV++DDD  DL+Q     +GVH+V + F
Subjt:  SPARMREIENNNEFESYNEEEENLDPTITTNAEEVEIDDDGSDLEQPPIGLFGVHDVLDAF

TrEMBL top hitse value%identityAlignment
A0A5D3D2L7 Uncharacterized protein8.2e-0861.82Show/hide
Query:  IENNNEFESYNEEEENLDPTITTNAEEVEIDDDGSDLEQPPIGLFGVHDVLDAFN
        IE+ N+FE+ NEE+   D TIT  AE+ E+DDDGSDL+QP + LFGVHDV +AFN
Subjt:  IENNNEFESYNEEEENLDPTITTNAEEVEIDDDGSDLEQPPIGLFGVHDVLDAFN

A0A5D3D569 Uncharacterized protein1.7e-1358.33Show/hide
Query:  MSNAPSSPNTVELYISQPKFSSPARMREIENNNEFESYNEEE-ENLDPTITTNAEEVEIDDDGSDLEQPPIGLFGVHDVLDAFN
        MSNAP  P+ VELYISQP  SS A +  IE  NEF++ N E+ +  DPTI TN E  E+DDD SD++QP   LFGVHDV +AFN
Subjt:  MSNAPSSPNTVELYISQPKFSSPARMREIENNNEFESYNEEE-ENLDPTITTNAEEVEIDDDGSDLEQPPIGLFGVHDVLDAFN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGGAAATATTGGTAATGGGCCAACTGGGATTGAATACGATGGGCAACCTTGTCTTCATATAAATATTCTTCGTCAAACTGAATTCAATGCATTCATTGAGACATT
ATATGATGCATTATCTATAGATAAAAATGATGGAATAGAGGTAAAATTTAGATATGGCAGTTATGTGGCGAGATCCACGTTCTACATTTCCATCTCATTACGAAGTGAAC
ATAACTTAAGGTTTATGATGAGTAATGCTCCATCCTCTCCAAATACAGTGGAGCTTTATATTTCTCAACCAAAATTCTCAAGTCCAGCACGAATGAGAGAAATTGAAAAT
AATAATGAGTTTGAAAGTTATAATGAAGAAGAGGAAAATTTGGACCCAACTATCACGACAAATGCAGAAGAAGTTGAAATAGATGATGATGGTAGTGATCTAGAGCAACC
ACCTATTGGACTATTTGGTGTTCATGATGTCCTTGATGCCTTCAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGGAAATATTGGTAATGGGCCAACTGGGATTGAATACGATGGGCAACCTTGTCTTCATATAAATATTCTTCGTCAAACTGAATTCAATGCATTCATTGAGACATT
ATATGATGCATTATCTATAGATAAAAATGATGGAATAGAGGTAAAATTTAGATATGGCAGTTATGTGGCGAGATCCACGTTCTACATTTCCATCTCATTACGAAGTGAAC
ATAACTTAAGGTTTATGATGAGTAATGCTCCATCCTCTCCAAATACAGTGGAGCTTTATATTTCTCAACCAAAATTCTCAAGTCCAGCACGAATGAGAGAAATTGAAAAT
AATAATGAGTTTGAAAGTTATAATGAAGAAGAGGAAAATTTGGACCCAACTATCACGACAAATGCAGAAGAAGTTGAAATAGATGATGATGGTAGTGATCTAGAGCAACC
ACCTATTGGACTATTTGGTGTTCATGATGTCCTTGATGCCTTCAATTAG
Protein sequenceShow/hide protein sequence
MNGNIGNGPTGIEYDGQPCLHINILRQTEFNAFIETLYDALSIDKNDGIEVKFRYGSYVARSTFYISISLRSEHNLRFMMSNAPSSPNTVELYISQPKFSSPARMREIEN
NNEFESYNEEEENLDPTITTNAEEVEIDDDGSDLEQPPIGLFGVHDVLDAFN