; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003621 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003621
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr08:4286535..4287138
RNA-Seq ExpressionHG10003621
SyntenyHG10003621
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA3022588.1 Hypothetical predicted protein, partial [Olea europaea subsp. europaea]4.9e-0535.79Show/hide
Query:  QRKEFDYLCTVREKEIWKTTRMGEVKSDYPPMEDVEFNSFYNEKIIAKPFQLIKDSDEHKAPTN---KEIKSIQLQNNFSNIILSSIAEQVYRIE
        Q ++   L T    + WKT      +S +PP++D+ F     E I+A P + + +S E    +    K+IK+IQ QNNF+NI+L S+  Q+ RIE
Subjt:  QRKEFDYLCTVREKEIWKTTRMGEVKSDYPPMEDVEFNSFYNEKIIAKPFQLIKDSDEHKAPTN---KEIKSIQLQNNFSNIILSSIAEQVYRIE

KJB20442.1 hypothetical protein B456_003G1484002, partial [Gossypium raimondii]5.4e-0436.17Show/hide
Query:  TVREKEIWKTTRMGEVKSDYPPMEDVEFNSFYNEKIIAKPFQLIKDSDEHKAPTNKEIKSIQLQNNFSNIILSSIAEQVYRIEDIINPQKIEKE
        T+R   IW+T + GEV+S +PP+ +V++    N  I A P + I+  D  +  ++K+IK I  QNN+ NI L +I +Q+  +E+++  Q I++E
Subjt:  TVREKEIWKTTRMGEVKSDYPPMEDVEFNSFYNEKIIAKPFQLIKDSDEHKAPTNKEIKSIQLQNNFSNIILSSIAEQVYRIEDIINPQKIEKE

KYP65886.1 hypothetical protein KK1_012162 [Cajanus cajan]3.2e-0437.21Show/hide
Query:  REKEIWKTTRMGEVKSDYPPMEDVEFNSFYNEKIIAKPFQLIKDSDEHKAPTNKEIKSIQLQNNFSNIILSSIAEQVYRIEDIINP
        R  + WKTT    + S+YPPM  ++     NE++ A P++ I +S+  K  + K+IK    Q NFSN +L ++++Q+ RIED   P
Subjt:  REKEIWKTTRMGEVKSDYPPMEDVEFNSFYNEKIIAKPFQLIKDSDEHKAPTNKEIKSIQLQNNFSNIILSSIAEQVYRIEDIINP

XP_023520850.1 uncharacterized protein LOC111784362 [Cucurbita pepo subsp. pepo]9.9e-1443.52Show/hide
Query:  WFNQRKEFDYLCTVREKEIWKTTRMGEVKSDYPPMEDVEFNSFYNEKIIAKPFQLIKDSDEHKAPTNKEIKSIQLQNNFSNIILSSIAEQVYRIEDIINP
        WF +      +CT+ ++  WKTT+ GEV S +PP+E+VEF+++Y EK+ A PF+ I +  E   PT K+IK+IQ QNN+SN ILS+IA Q+  IE  I+ 
Subjt:  WFNQRKEFDYLCTVREKEIWKTTRMGEVKSDYPPMEDVEFNSFYNEKIIAKPFQLIKDSDEHKAPTNKEIKSIQLQNNFSNIILSSIAEQVYRIEDIINP

Query:  QKIEKEQK
        +   ++++
Subjt:  QKIEKEQK

TrEMBL top hitse value%identityAlignment
A0A0D2MP23 CCHC-type domain-containing protein (Fragment)2.6e-0436.17Show/hide
Query:  TVREKEIWKTTRMGEVKSDYPPMEDVEFNSFYNEKIIAKPFQLIKDSDEHKAPTNKEIKSIQLQNNFSNIILSSIAEQVYRIEDIINPQKIEKE
        T+R   IW+T + GEV+S +PP+ +V++    N  I A P + I+  D  +  ++K+IK I  QNN+ NI L +I +Q+  +E+++  Q I++E
Subjt:  TVREKEIWKTTRMGEVKSDYPPMEDVEFNSFYNEKIIAKPFQLIKDSDEHKAPTNKEIKSIQLQNNFSNIILSSIAEQVYRIEDIINPQKIEKE

A0A0D2SRS0 Uncharacterized protein (Fragment)7.6e-0437.23Show/hide
Query:  TVREKEIWKTTRMGEVKSDYPPMEDVEFNSFYNEKIIAKPFQLIKDSDEHKAPTNKEIKSIQLQNNFSNIILSSIAEQVYRIEDIINPQKIEKE
        T+R    W+T + GEV+S +PP+ +V++    N  I A P ++ +  D  +  ++K+IK I  QNN++NI L +I +Q+  IE++I  Q I+KE
Subjt:  TVREKEIWKTTRMGEVKSDYPPMEDVEFNSFYNEKIIAKPFQLIKDSDEHKAPTNKEIKSIQLQNNFSNIILSSIAEQVYRIEDIINPQKIEKE

A0A151QU44 Uncharacterized protein1.0e-0333.73Show/hide
Query:  VREKEIWKTTRMGEVKSDYPPMEDVEFNSFYNEKIIAKPFQLIKDSDEHKAPTNKEIKSIQLQNNFSNIILSSIAEQVYRIED
        ++  + WKT     + S+YPPM  ++     N+++ A P++ I +S+  K  + K+IK    Q NFSN +L ++++Q+ RIED
Subjt:  VREKEIWKTTRMGEVKSDYPPMEDVEFNSFYNEKIIAKPFQLIKDSDEHKAPTNKEIKSIQLQNNFSNIILSSIAEQVYRIED

A0A151S2K0 Uncharacterized protein1.0e-0336.05Show/hide
Query:  REKEIWKTTRMGEVKSDYPPMEDVEFNSFYNEKIIAKPFQLIKDSDEHKAPTNKEIKSIQLQNNFSNIILSSIAEQVYRIEDIINP
        +  + WKT     + S+YPPM  V+     N+++ A P++ I +S+  K  + K+IK I  Q NFSN +L ++++Q+ RIED   P
Subjt:  REKEIWKTTRMGEVKSDYPPMEDVEFNSFYNEKIIAKPFQLIKDSDEHKAPTNKEIKSIQLQNNFSNIILSSIAEQVYRIEDIINP

A0A151TFW5 CCHC-type domain-containing protein1.5e-0437.21Show/hide
Query:  REKEIWKTTRMGEVKSDYPPMEDVEFNSFYNEKIIAKPFQLIKDSDEHKAPTNKEIKSIQLQNNFSNIILSSIAEQVYRIEDIINP
        R  + WKTT    + S+YPPM  ++     NE++ A P++ I +S+  K  + K+IK    Q NFSN +L ++++Q+ RIED   P
Subjt:  REKEIWKTTRMGEVKSDYPPMEDVEFNSFYNEKIIAKPFQLIKDSDEHKAPTNKEIKSIQLQNNFSNIILSSIAEQVYRIEDIINP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAAAAAGTGACATCTCCAACACAAACTGATATGGAGACAGGATGGTTTAATCAAAGAAAGGAATTTGATTATCTCTGTACAGTCAGAGAAAAAGAAATATGGAA
AACAACCCGTATGGGAGAAGTCAAATCTGACTATCCTCCTATGGAAGATGTAGAATTCAACAGTTTTTACAATGAGAAAATTATTGCAAAACCTTTTCAATTAATCAAAG
ATTCAGATGAGCATAAAGCTCCTACTAATAAAGAAATTAAAAGTATTCAACTTCAAAATAATTTTTCTAACATAATTCTCTCTTCTATAGCCGAACAGGTTTATAGAATT
GAAGATATAATAAATCCTCAAAAAATTGAAAAGGAACAAAAATTGTTTCTACCTCGTAAAATTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAAAAAGTGACATCTCCAACACAAACTGATATGGAGACAGGATGGTTTAATCAAAGAAAGGAATTTGATTATCTCTGTACAGTCAGAGAAAAAGAAATATGGAA
AACAACCCGTATGGGAGAAGTCAAATCTGACTATCCTCCTATGGAAGATGTAGAATTCAACAGTTTTTACAATGAGAAAATTATTGCAAAACCTTTTCAATTAATCAAAG
ATTCAGATGAGCATAAAGCTCCTACTAATAAAGAAATTAAAAGTATTCAACTTCAAAATAATTTTTCTAACATAATTCTCTCTTCTATAGCCGAACAGGTTTATAGAATT
GAAGATATAATAAATCCTCAAAAAATTGAAAAGGAACAAAAATTGTTTCTACCTCGTAAAATTAAATAA
Protein sequenceShow/hide protein sequence
MKEKVTSPTQTDMETGWFNQRKEFDYLCTVREKEIWKTTRMGEVKSDYPPMEDVEFNSFYNEKIIAKPFQLIKDSDEHKAPTNKEIKSIQLQNNFSNIILSSIAEQVYRI
EDIINPQKIEKEQKLFLPRKIK