; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003656 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003656
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSenescence-associated protein
Genome locationChr08:4986749..4990321
RNA-Seq ExpressionHG10003656
SyntenyHG10003656
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GBC10051.1 hypothetical protein RclHR1_00930029 [Rhizophagus clarus]4.4e-4576.03Show/hide
Query:  MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSP
        +PGARRCR  P GA CQP+  +RRLHR     G G R NPHRS P+VDR+TG +PFHIR G IA PHPLPSRQFQALFDSLFKV+FIFPSRYLFAIGLSP
Subjt:  MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSP

Query:  IFSLGQNLPPDCGCIPKQPDS
        +FSLG+NLPPD GCIPKQPDS
Subjt:  IFSLGQNLPPDCGCIPKQPDS

XP_022933354.1 uncharacterized protein LOC111440692 [Cucurbita moschata]3.4e-6190.77Show/hide
Query:  MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSP
        MPGARRCRS PEGA CQPRSG+RRLH+ NKGLG G RLNPHRSMPQVD RTG  PFHIRLGHIAGPHPLPSRQFQALFDSLFKV+FIFPSRYLFAIGLSP
Subjt:  MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSP

Query:  IFSLGQNLPPDCGCIPKQPDSLTAPRGATG
        IFSLGQNLPPD GCIPKQPDSLTAPRGATG
Subjt:  IFSLGQNLPPDCGCIPKQPDSLTAPRGATG

XP_022975713.1 uncharacterized protein LOC111475769 [Cucurbita maxima]1.8e-5989.23Show/hide
Query:  MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSP
        MPGARRCRS PEGA CQPRSG+RRLH+ NKGLG G RLNPHRSMPQVD RTG  PFHIRLGHI GPHPLPSRQFQALFDSLFKV+FIFPSRYLFAIGLSP
Subjt:  MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSP

Query:  IFSLGQNLPPDCGCIPKQPDSLTAPRGATG
        IFSLGQNLPPD G IPKQPDSLTAPRGATG
Subjt:  IFSLGQNLPPDCGCIPKQPDSLTAPRGATG

XP_023520622.1 uncharacterized protein LOC111784033 [Cucurbita pepo subsp. pepo]2.2e-6090Show/hide
Query:  MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSP
        MPGARRCRS P+GA CQPRSG+RRLH+ NKGLG G RLNPHRSMPQVD RTG SPFHIRL HIAGPHPLPSRQFQALFDSLFKV+FIFPSRYLFAIGLSP
Subjt:  MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSP

Query:  IFSLGQNLPPDCGCIPKQPDSLTAPRGATG
        IFSLGQNLPPD GCIPKQPDSLTAPRGATG
Subjt:  IFSLGQNLPPDCGCIPKQPDSLTAPRGATG

XP_023552350.1 uncharacterized protein LOC111810043 [Cucurbita pepo subsp. pepo]2.2e-6090Show/hide
Query:  MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSP
        MPGARRCRS P+GA CQPRSG+RRLH+ NKGLG G RLNPHRSMPQVD RTG SPFHIRL HIAGPHPLPSRQFQALFDSLFKV+FIFPSRYLFAIGLSP
Subjt:  MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSP

Query:  IFSLGQNLPPDCGCIPKQPDSLTAPRGATG
        IFSLGQNLPPD GCIPKQPDSLTAPRGATG
Subjt:  IFSLGQNLPPDCGCIPKQPDSLTAPRGATG

TrEMBL top hitse value%identityAlignment
A0A2Z6S693 Uncharacterized protein2.1e-4576.03Show/hide
Query:  MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSP
        +PGARRCR  P GA CQP+  +RRLHR     G G R NPHRS P+VDR+TG +PFHIR G IA PHPLPSRQFQALFDSLFKV+FIFPSRYLFAIGLSP
Subjt:  MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSP

Query:  IFSLGQNLPPDCGCIPKQPDS
        +FSLG+NLPPD GCIPKQPDS
Subjt:  IFSLGQNLPPDCGCIPKQPDS

A0A6J1EZI8 uncharacterized protein LOC1114406921.6e-6190.77Show/hide
Query:  MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSP
        MPGARRCRS PEGA CQPRSG+RRLH+ NKGLG G RLNPHRSMPQVD RTG  PFHIRLGHIAGPHPLPSRQFQALFDSLFKV+FIFPSRYLFAIGLSP
Subjt:  MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSP

Query:  IFSLGQNLPPDCGCIPKQPDSLTAPRGATG
        IFSLGQNLPPD GCIPKQPDSLTAPRGATG
Subjt:  IFSLGQNLPPDCGCIPKQPDSLTAPRGATG

A0A6J1IK28 uncharacterized protein LOC1114757698.9e-6089.23Show/hide
Query:  MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSP
        MPGARRCRS PEGA CQPRSG+RRLH+ NKGLG G RLNPHRSMPQVD RTG  PFHIRLGHI GPHPLPSRQFQALFDSLFKV+FIFPSRYLFAIGLSP
Subjt:  MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSP

Query:  IFSLGQNLPPDCGCIPKQPDSLTAPRGATG
        IFSLGQNLPPD G IPKQPDSLTAPRGATG
Subjt:  IFSLGQNLPPDCGCIPKQPDSLTAPRGATG

A0A6N2KST1 Uncharacterized protein (Fragment)4.0e-4475.78Show/hide
Query:  GARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSPIF
        GARR     +GARC PRS +R LHR  KG GLG   +PHRS P+ DRRTG    HIR G IAGPHPLPSRQFQALFDSLFKV+FIFPSRYLFAIGLSPIF
Subjt:  GARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSPIF

Query:  SLGQNLPPDCGCIPKQPDSLTAPRGATG
        SLG+NLPPD GCIPKQPDS TAPRGA G
Subjt:  SLGQNLPPDCGCIPKQPDSLTAPRGATG

A0A6N2MN31 Uncharacterized protein2.3e-4776.15Show/hide
Query:  MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSP
        MPGAR C +  +GARC PRS +R LHR  KG GLG   +PHRS P+ DR   +SPFHIR G IAGPHPLPSRQFQALFDSLFKV+FIFPSRYLFAIGLSP
Subjt:  MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSP

Query:  IFSLGQNLPPDCGCIPKQPDSLTAPRGATG
        IFSLG+NLPPD GCIPKQPDS TAPRGA G
Subjt:  IFSLGQNLPPDCGCIPKQPDSLTAPRGATG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGGAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCGCGCGCTGCCAGCCACGATCGGGACAACGACGTCTCCACAGGCATAACAAAGGCCTGGGCTTAGGCCACCG
TCTCAATCCGCATCGGTCCATGCCCCAAGTCGATCGGCGGACCGGCTCGTCACCGTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAAT
TTCAAGCACTATTTGACTCTCTTTTCAAAGTCATTTTCATCTTTCCTTCACGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCC
GATTGCGGCTGCATTCCCAAACAACCCGACTCATTGACAGCGCCTCGTGGTGCGACAGGAGGATTGGGGGGAGATGTTGCTGAGTTTGGAATTGTCCTACTGAATGAGTC
TATAGAGGTCCAGACTGCTTCCTATGGCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAGGAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCGCGCGCTGCCAGCCACGATCGGGACAACGACGTCTCCACAGGCATAACAAAGGCCTGGGCTTAGGCCACCG
TCTCAATCCGCATCGGTCCATGCCCCAAGTCGATCGGCGGACCGGCTCGTCACCGTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAAT
TTCAAGCACTATTTGACTCTCTTTTCAAAGTCATTTTCATCTTTCCTTCACGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCC
GATTGCGGCTGCATTCCCAAACAACCCGACTCATTGACAGCGCCTCGTGGTGCGACAGGAGGATTGGGGGGAGATGTTGCTGAGTTTGGAATTGTCCTACTGAATGAGTC
TATAGAGGTCCAGACTGCTTCCTATGGCTTCTAG
Protein sequenceShow/hide protein sequence
MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSPIFSLGQNLPP
DCGCIPKQPDSLTAPRGATGGLGGDVAEFGIVLLNESIEVQTASYGF