; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003676 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003676
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein of unknown function (DUF3511)
Genome locationChr08:5492230..5492493
RNA-Seq ExpressionHG10003676
SyntenyHG10003676
Gene Ontology termsNA
InterPro domainsIPR021899 - Protein of unknown function DUF3511


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039168.1 Mediator of RNA polymerase II transcription subunit 8 [Cucumis melo var. makuwa]2.5e-3796.55Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSSTSGEFGFQTRS+SYNFNGPT K TGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

KGN45893.1 hypothetical protein Csa_005289 [Cucumis sativus]8.4e-3897.7Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSSTSGEFGFQTRS+SYNFNGPTAK TGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

XP_022930185.1 uncharacterized protein LOC111436683 [Cucurbita moschata]1.8e-3593.1Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSS SGEF FQTRS+SYNFNGPT K TGFSTS DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

XP_022974055.1 uncharacterized protein LOC111472683 [Cucurbita maxima]7.4e-3490.8Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSS SGEF FQTRS+SYNFNGPT   TGFSTS DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRY L
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

XP_023536368.1 uncharacterized protein LOC111797558 [Cucurbita pepo subsp. pepo]1.8e-3593.1Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSS SGEF FQTRS+SYNFNGPT K TGFSTS DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

TrEMBL top hitse value%identityAlignment
A0A0A0K8Y3 Uncharacterized protein4.1e-3897.7Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSSTSGEFGFQTRS+SYNFNGPTAK TGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

A0A2P5BV48 Uncharacterized protein4.5e-2978.16Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKS+SFP+YSS+ SGEFGF+ RS+SYNFNGP  K +GF TS+DPELQRK+RIASYNVF ME KVKSSV+NSFKWIK+KFSDIRYG+
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

A0A5A7T8F8 Mediator of RNA polymerase II transcription subunit 81.2e-3796.55Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSSTSGEFGFQTRS+SYNFNGPT K TGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

A0A6J1EWA0 uncharacterized protein LOC1114366838.5e-3693.1Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSS SGEF FQTRS+SYNFNGPT K TGFSTS DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

A0A6J1ICY9 uncharacterized protein LOC1114726833.6e-3490.8Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSS SGEF FQTRS+SYNFNGPT   TGFSTS DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRY L
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72720.1 Protein of unknown function (DUF3511)9.7e-0838Show/hide
Query:  EKSKSFP----------KYSSSTSGEFGFQT----RSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        EKS+S P           YS+ST   +   T     S++ +      K  GF    + E+QRK+R+ASYNV+ +E +VK S+K SFKW K   S+  YGL
Subjt:  EKSKSFP----------KYSSSTSGEFGFQT----RSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

AT2G47480.1 Protein of unknown function (DUF3511)2.4e-0651.22Show/hide
Query:  ADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDI
        +D E++RK+RIA Y  + +E KVKS++KN F+WIK K   I
Subjt:  ADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDI

AT3G05725.1 Protein of unknown function (DUF3511)1.1e-0645.45Show/hide
Query:  DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        DPE++RKRR+A Y +++ E K+K +++ S+KWIK + S I +G+
Subjt:  DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

AT4G09890.1 Protein of unknown function (DUF3511)1.8e-1754.84Show/hide
Query:  MEKSKSFPKYSSS-TSGEFGF-QTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFS----DIRYGL
        M+ SKS+ +YSSS ++ EFG+ Q RS+SYNFNGP   T       DPE++RK+R+ASYN+F  E K+KS++KNSFKWIK KFS     IRY +
Subjt:  MEKSKSFPKYSSS-TSGEFGF-QTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFS----DIRYGL

AT5G11970.1 Protein of unknown function (DUF3511)2.3e-0953.49Show/hide
Query:  DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYG
        DPELQRK+R+ASY ++ +E KVK S +NSF+W+K +++ + YG
Subjt:  DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAGCAAATCATTTCCTAAGTACTCATCCTCAACCTCGGGCGAGTTCGGTTTCCAAACCCGATCCAGCTCGTACAATTTCAACGGCCCAACTGCAAAGACAAC
CGGGTTCTCGACCTCGGCCGATCCCGAGCTCCAAAGGAAGAGAAGAATTGCATCTTATAATGTTTTCAACATGGAAAACAAAGTCAAGTCTAGTGTAAAGAACAGCTTCA
AGTGGATCAAAACTAAGTTTAGTGACATTCGCTATGGTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAGCAAATCATTTCCTAAGTACTCATCCTCAACCTCGGGCGAGTTCGGTTTCCAAACCCGATCCAGCTCGTACAATTTCAACGGCCCAACTGCAAAGACAAC
CGGGTTCTCGACCTCGGCCGATCCCGAGCTCCAAAGGAAGAGAAGAATTGCATCTTATAATGTTTTCAACATGGAAAACAAAGTCAAGTCTAGTGTAAAGAACAGCTTCA
AGTGGATCAAAACTAAGTTTAGTGACATTCGCTATGGTTTGTGA
Protein sequenceShow/hide protein sequence
MEKSKSFPKYSSSTSGEFGFQTRSSSYNFNGPTAKTTGFSTSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL