; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003681 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003681
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr08:5672807..5673694
RNA-Seq ExpressionHG10003681
SyntenyHG10003681
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH07150.1 TatD related DNase [Prunus dulcis]3.1e-5235.94Show/hide
Query:  MIQETKRPTVDIQFIKAIWSSNVIGWTFVETFGKSGGMLTMWDESKITPLEFLKGGYSLSVKVMTNCKITCWVTNVYGAIVNRERRHLWLKLLSIFYYCE
        ++ ETK+  VD Q +  +W S    W F  + G+SGG+  +W+   ++ ++ + G +S+S++++ N     W++ +YG    RER   W +L  ++ YC 
Subjt:  MIQETKRPTVDIQFIKAIWSSNVIGWTFVETFGKSGGMLTMWDESKITPLEFLKGGYSLSVKVMTNCKITCWVTNVYGAIVNRERRHLWLKLLSIFYYCE

Query:  ESWCIGGDFNITRWSHERFPIGRTTRGMRKLNSFIQSTGLFEIPLSNGHFTWSREGNSKSHSLLDRFFTNKAWDDVFDNSRVSRKARLFSDHFPLLLEAR
        + WC+GGDFN+ R+S E+   GR T+ MR  N FIQ T L +  L N  FTWS    +     LDRF  + +W+D F + R     R+ SDH P+ L+  
Subjt:  ESWCIGGDFNITRWSHERFPIGRTTRGMRKLNSFIQSTGLFEIPLSNGHFTWSREGNSKSHSLLDRFFTNKAWDDVFDNSRVSRKARLFSDHFPLLLEAR

Query:  AVTWGPSPFRFCNSWMRIKDCSNLIQTTLTLDRSDGWAGFAISLKLRKVKDKVKAW----FGDYELE-RKRKEKDLISELA
         V WGPSPFRF N W++  D    I+     D++ GW G+    +L+ +K K+K W    FGD E + R+ + + LI +LA
Subjt:  AVTWGPSPFRFCNSWMRIKDCSNLIQTTLTLDRSDGWAGFAISLKLRKVKDKVKAW----FGDYELE-RKRKEKDLISELA

TYJ98683.1 hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa]1.8e-7655.79Show/hide
Query:  VDIQFIKAIWSSNVIGWTFVETFGKSGGMLTMWDESKITPLEFLKGGYSLSVKVMTNCKITCWVTNVYGAIVNRERRHLWLKLLSIFYYCEESWCIGGDF
        +DI  IK++WSS  IGW  VE+FG+ GG+LTMWD SKI  +E LKGGYSLS+  +T+CK +CW+TNVYG     ERR +WL L+S+  YC  +WCIGG  
Subjt:  VDIQFIKAIWSSNVIGWTFVETFGKSGGMLTMWDESKITPLEFLKGGYSLSVKVMTNCKITCWVTNVYGAIVNRERRHLWLKLLSIFYYCEESWCIGGDF

Query:  NITRWSHERFPIGRTTRGMRKLNSFIQSTGLFEIPLSNGHFTWSREGNSKSHSLLDRFFTNKAWDDVFDNSRVSRKARLFSDHFPLLLEARAVTWGPSPF
        NITRW+HE FP+ + TRGMR+ N+ I S  ++E+PL NG  TWSREG+S S SLLD FF +K WD++ +NSRV RKA   SDHFPLLLEA ++ WGPSPF
Subjt:  NITRWSHERFPIGRTTRGMRKLNSFIQSTGLFEIPLSNGHFTWSREGNSKSHSLLDRFFTNKAWDDVFDNSRVSRKARLFSDHFPLLLEARAVTWGPSPF

Query:  RFCNSWMRIKDCSNLIQTTLTLDRSDGWAGFAI
        RF NSW+   +C+ +I+    +     WAGF +
Subjt:  RFCNSWMRIKDCSNLIQTTLTLDRSDGWAGFAI

VVA20479.1 Hypothetical predicted protein, partial [Prunus dulcis]5.4e-5235.51Show/hide
Query:  MIQETKRPTVDIQFIKAIWSSNVIGWTFVETFGKSGGMLTMWDESKITPLEFLKGGYSLSVKVMTNCKITCWVTNVYGAIVNRERRHLWLKLLSIFYYCE
        ++ ETK+  VD Q +  +W S    W F  + G+SGG+  +W+   ++ ++ + G +S+S++++ N     W++ +YG    RER   W +L  ++ YC 
Subjt:  MIQETKRPTVDIQFIKAIWSSNVIGWTFVETFGKSGGMLTMWDESKITPLEFLKGGYSLSVKVMTNCKITCWVTNVYGAIVNRERRHLWLKLLSIFYYCE

Query:  ESWCIGGDFNITRWSHERFPIGRTTRGMRKLNSFIQSTGLFEIPLSNGHFTWSREGNSKSHSLLDRFFTNKAWDDVFDNSRVSRKARLFSDHFPLLLEAR
        + WC+GGDFN+ R+S E+   GR T+ MR  N FIQ T L +  L N  FTWS    +     LDRF  + +W+D F + R     R+ SDH P+ L+  
Subjt:  ESWCIGGDFNITRWSHERFPIGRTTRGMRKLNSFIQSTGLFEIPLSNGHFTWSREGNSKSHSLLDRFFTNKAWDDVFDNSRVSRKARLFSDHFPLLLEAR

Query:  AVTWGPSPFRFCNSWMRIKDCSNLIQTTLTLDRSDGWAGFAISLKLRKVKDKVKAW----FGDYELERKRKEKDLI
         V WGPSPFRF N W++  D    I+     D++ GW G+    +L+ +K K+K W    FGD E + +  E  L+
Subjt:  AVTWGPSPFRFCNSWMRIKDCSNLIQTTLTLDRSDGWAGFAISLKLRKVKDKVKAW----FGDYELERKRKEKDLI

XP_028075126.1 uncharacterized protein LOC114277426 [Camellia sinensis]8.0e-4838.02Show/hide
Query:  MIQETKRPTVDIQFIKAIWSSNVIGWTFVETFGKSGGMLTMWDESKITPLEFLKGGYSLSVKVMTNCKITCWVTNVYGAIVNRERRHLWLKLLSIFYYCE
        M QETK    D  FI+++W +    W  + + G+SGG+L MWD+  ++  E + G +SLS+K         W+T VYG      R+  W +L  +F  C 
Subjt:  MIQETKRPTVDIQFIKAIWSSNVIGWTFVETFGKSGGMLTMWDESKITPLEFLKGGYSLSVKVMTNCKITCWVTNVYGAIVNRERRHLWLKLLSIFYYCE

Query:  ESWCIGGDFNITRWSHERFPIGRTTRGMRKLNSFIQSTGLFEIPLSNGHFTWSREGNSKSHSLLDRFFTNKAWDDVFDNSRVSRKARLFSDHFPLLLEAR
         +WC+G DFN+ R + E+     T R MR  +SFI+   L + PLSN  FTWS    ++    LDRF     W+++F N R   + R+ SDHFP++LE+ 
Subjt:  ESWCIGGDFNITRWSHERFPIGRTTRGMRKLNSFIQSTGLFEIPLSNGHFTWSREGNSKSHSLLDRFFTNKAWDDVFDNSRVSRKARLFSDHFPLLLEAR

Query:  AVTWGPSPFRFCNSWMRIKDCSNLIQTTLTLDRSDGWAGFAISLKLRKVKDKVKAW----FGD
           WGPSPFRF N W+  +      +      R  GW GF    KLR VKD +K W    FGD
Subjt:  AVTWGPSPFRFCNSWMRIKDCSNLIQTTLTLDRSDGWAGFAISLKLRKVKDKVKAW----FGD

XP_038904301.1 uncharacterized protein LOC120090656 [Benincasa hispida]3.3e-4951.6Show/hide
Query:  LWLKLLSIFYYCEESWCIGGDFNITRWSHERFPIGRTTRGMRKLNSFIQSTGLFEIPLSNGHFTWSREGNSKSHSLLDRFFTNKAWDDVFDNSRVSRKAR
        +W +L S+    ++ WCIG +FN  R  HERFP+GR TR M   N FI+   L E PLSNG FTWSREG+  S SLLD F  +  W+DVFDNSRV+R+AR
Subjt:  LWLKLLSIFYYCEESWCIGGDFNITRWSHERFPIGRTTRGMRKLNSFIQSTGLFEIPLSNGHFTWSREGNSKSHSLLDRFFTNKAWDDVFDNSRVSRKAR

Query:  LFSDHFPLLLEARAVTWGPSPFRFCNSWMRIKDCSNLIQTTLTLDRSDGWAGFAISLKLRKVKDKVKAWFGDYELERKRKEKDLISEL
          SDHFPL LEA A  WGPS FRFCNSW+  K+   LI+ +L    +  WA   +S  LRK K  +K WF ++  E K KE+ L++EL
Subjt:  LFSDHFPLLLEARAVTWGPSPFRFCNSWMRIKDCSNLIQTTLTLDRSDGWAGFAISLKLRKVKDKVKAWFGDYELERKRKEKDLISEL

TrEMBL top hitse value%identityAlignment
A0A4Y1RS61 TatD related DNase1.5e-5235.94Show/hide
Query:  MIQETKRPTVDIQFIKAIWSSNVIGWTFVETFGKSGGMLTMWDESKITPLEFLKGGYSLSVKVMTNCKITCWVTNVYGAIVNRERRHLWLKLLSIFYYCE
        ++ ETK+  VD Q +  +W S    W F  + G+SGG+  +W+   ++ ++ + G +S+S++++ N     W++ +YG    RER   W +L  ++ YC 
Subjt:  MIQETKRPTVDIQFIKAIWSSNVIGWTFVETFGKSGGMLTMWDESKITPLEFLKGGYSLSVKVMTNCKITCWVTNVYGAIVNRERRHLWLKLLSIFYYCE

Query:  ESWCIGGDFNITRWSHERFPIGRTTRGMRKLNSFIQSTGLFEIPLSNGHFTWSREGNSKSHSLLDRFFTNKAWDDVFDNSRVSRKARLFSDHFPLLLEAR
        + WC+GGDFN+ R+S E+   GR T+ MR  N FIQ T L +  L N  FTWS    +     LDRF  + +W+D F + R     R+ SDH P+ L+  
Subjt:  ESWCIGGDFNITRWSHERFPIGRTTRGMRKLNSFIQSTGLFEIPLSNGHFTWSREGNSKSHSLLDRFFTNKAWDDVFDNSRVSRKARLFSDHFPLLLEAR

Query:  AVTWGPSPFRFCNSWMRIKDCSNLIQTTLTLDRSDGWAGFAISLKLRKVKDKVKAW----FGDYELE-RKRKEKDLISELA
         V WGPSPFRF N W++  D    I+     D++ GW G+    +L+ +K K+K W    FGD E + R+ + + LI +LA
Subjt:  AVTWGPSPFRFCNSWMRIKDCSNLIQTTLTLDRSDGWAGFAISLKLRKVKDKVKAW----FGDYELE-RKRKEKDLISELA

A0A5D3BHE3 Uncharacterized protein8.9e-7755.79Show/hide
Query:  VDIQFIKAIWSSNVIGWTFVETFGKSGGMLTMWDESKITPLEFLKGGYSLSVKVMTNCKITCWVTNVYGAIVNRERRHLWLKLLSIFYYCEESWCIGGDF
        +DI  IK++WSS  IGW  VE+FG+ GG+LTMWD SKI  +E LKGGYSLS+  +T+CK +CW+TNVYG     ERR +WL L+S+  YC  +WCIGG  
Subjt:  VDIQFIKAIWSSNVIGWTFVETFGKSGGMLTMWDESKITPLEFLKGGYSLSVKVMTNCKITCWVTNVYGAIVNRERRHLWLKLLSIFYYCEESWCIGGDF

Query:  NITRWSHERFPIGRTTRGMRKLNSFIQSTGLFEIPLSNGHFTWSREGNSKSHSLLDRFFTNKAWDDVFDNSRVSRKARLFSDHFPLLLEARAVTWGPSPF
        NITRW+HE FP+ + TRGMR+ N+ I S  ++E+PL NG  TWSREG+S S SLLD FF +K WD++ +NSRV RKA   SDHFPLLLEA ++ WGPSPF
Subjt:  NITRWSHERFPIGRTTRGMRKLNSFIQSTGLFEIPLSNGHFTWSREGNSKSHSLLDRFFTNKAWDDVFDNSRVSRKARLFSDHFPLLLEARAVTWGPSPF

Query:  RFCNSWMRIKDCSNLIQTTLTLDRSDGWAGFAI
        RF NSW+   +C+ +I+    +     WAGF +
Subjt:  RFCNSWMRIKDCSNLIQTTLTLDRSDGWAGFAI

A0A5E4F090 Reverse transcriptase domain-containing protein (Fragment)2.6e-5235.51Show/hide
Query:  MIQETKRPTVDIQFIKAIWSSNVIGWTFVETFGKSGGMLTMWDESKITPLEFLKGGYSLSVKVMTNCKITCWVTNVYGAIVNRERRHLWLKLLSIFYYCE
        ++ ETK+  VD Q +  +W S    W F  + G+SGG+  +W+   ++ ++ + G +S+S++++ N     W++ +YG    RER   W +L  ++ YC 
Subjt:  MIQETKRPTVDIQFIKAIWSSNVIGWTFVETFGKSGGMLTMWDESKITPLEFLKGGYSLSVKVMTNCKITCWVTNVYGAIVNRERRHLWLKLLSIFYYCE

Query:  ESWCIGGDFNITRWSHERFPIGRTTRGMRKLNSFIQSTGLFEIPLSNGHFTWSREGNSKSHSLLDRFFTNKAWDDVFDNSRVSRKARLFSDHFPLLLEAR
        + WC+GGDFN+ R+S E+   GR T+ MR  N FIQ T L +  L N  FTWS    +     LDRF  + +W+D F + R     R+ SDH P+ L+  
Subjt:  ESWCIGGDFNITRWSHERFPIGRTTRGMRKLNSFIQSTGLFEIPLSNGHFTWSREGNSKSHSLLDRFFTNKAWDDVFDNSRVSRKARLFSDHFPLLLEAR

Query:  AVTWGPSPFRFCNSWMRIKDCSNLIQTTLTLDRSDGWAGFAISLKLRKVKDKVKAW----FGDYELERKRKEKDLI
         V WGPSPFRF N W++  D    I+     D++ GW G+    +L+ +K K+K W    FGD E + +  E  L+
Subjt:  AVTWGPSPFRFCNSWMRIKDCSNLIQTTLTLDRSDGWAGFAISLKLRKVKDKVKAW----FGDYELERKRKEKDLI

M5VS59 Reverse transcriptase domain-containing protein (Fragment)4.4e-5235.51Show/hide
Query:  MIQETKRPTVDIQFIKAIWSSNVIGWTFVETFGKSGGMLTMWDESKITPLEFLKGGYSLSVKVMTNCKITCWVTNVYGAIVNRERRHLWLKLLSIFYYCE
        ++ ETK+ TVD Q +  +W S    W F  + G+SGG+  +W+   ++ ++ + G +S+S++++ N     W++ +YG    RER   W +L  ++ +C 
Subjt:  MIQETKRPTVDIQFIKAIWSSNVIGWTFVETFGKSGGMLTMWDESKITPLEFLKGGYSLSVKVMTNCKITCWVTNVYGAIVNRERRHLWLKLLSIFYYCE

Query:  ESWCIGGDFNITRWSHERFPIGRTTRGMRKLNSFIQSTGLFEIPLSNGHFTWSREGNSKSHSLLDRFFTNKAWDDVFDNSRVSRKARLFSDHFPLLLEAR
        + WC+GGDFN+ R+S E+   GR T+ MR  N FIQ T L +  L N  FTWS    +     LDRF  + +W+D F + R     R+ SDH P+ L+  
Subjt:  ESWCIGGDFNITRWSHERFPIGRTTRGMRKLNSFIQSTGLFEIPLSNGHFTWSREGNSKSHSLLDRFFTNKAWDDVFDNSRVSRKARLFSDHFPLLLEAR

Query:  AVTWGPSPFRFCNSWMRIKDCSNLIQTTLTLDRSDGWAGFAISLKLRKVKDKVKAW----FGDYELERKRKEKDLI
         V WGPSPFRF N W+   D    I+     D+  GW G+    +L+ +K K+K W    FGD E + +  E  L+
Subjt:  AVTWGPSPFRFCNSWMRIKDCSNLIQTTLTLDRSDGWAGFAISLKLRKVKDKVKAW----FGDYELERKRKEKDLI

M5WPQ5 Reverse transcriptase domain-containing protein1.7e-5135.14Show/hide
Query:  MIQETKRPTVDIQFIKAIWSSNVIGWTFVETFGKSGGMLTMWDESKITPLEFLKGGYSLSVKVMTNCKITCWVTNVYGAIVNRERRHLWLKLLSIFYYCE
        ++ ETK+  VD Q +  +W S    W F  + G+SGG+  +W+   ++ ++ + G +S+S++++ N     W++ +YG    RER   W +L  ++ YC 
Subjt:  MIQETKRPTVDIQFIKAIWSSNVIGWTFVETFGKSGGMLTMWDESKITPLEFLKGGYSLSVKVMTNCKITCWVTNVYGAIVNRERRHLWLKLLSIFYYCE

Query:  ESWCIGGDFNITRWSHERFPIGRTTRGMRKLNSFIQSTGLFEIPLSNGHFTWSREGNSKSHSLLDRFFTNKAWDDVFDNSRVSRKARLFSDHFPLLLEAR
        + WC+GGDFN+ R+S E+   GR T+ MR  N FIQ T L +  L N  FTWS    +     LDRF  + +W++ F + R     R+ SDH P+ L++ 
Subjt:  ESWCIGGDFNITRWSHERFPIGRTTRGMRKLNSFIQSTGLFEIPLSNGHFTWSREGNSKSHSLLDRFFTNKAWDDVFDNSRVSRKARLFSDHFPLLLEAR

Query:  AVTWGPSPFRFCNSWMRIKDCSNLIQTTLTLDRSDGWAGFAISLKLRKVKDKVKAW----FGDYELERKRKEKDLI
         V WGPSPFRF N W+   D    I+     D+  GW G+    +L+ +K K+K W    FGD E + +  E  L+
Subjt:  AVTWGPSPFRFCNSWMRIKDCSNLIQTTLTLDRSDGWAGFAISLKLRKVKDKVKAW----FGDYELERKRKEKDLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCAAGAAACCAAAAGGCCCACCGTTGATATTCAGTTTATCAAAGCCATTTGGAGCTCTAATGTTATAGGTTGGACATTTGTGGAAACTTTTGGAAAATCAGGAGG
CATGCTCACTATGTGGGATGAAAGCAAGATTACGCCATTGGAATTCTTGAAAGGAGGCTACTCACTCTCGGTGAAGGTTATGACAAATTGCAAAATCACATGTTGGGTTA
CAAATGTGTACGGTGCAATTGTTAACAGGGAAAGAAGACATCTTTGGCTGAAACTTCTTTCAATTTTTTATTACTGTGAGGAATCTTGGTGTATTGGAGGGGACTTCAAC
ATAACAAGGTGGAGTCACGAGAGATTTCCCATAGGAAGAACTACAAGAGGTATGAGAAAGCTTAACTCTTTCATCCAATCAACAGGGCTGTTTGAAATCCCTTTATCAAA
TGGTCATTTCACATGGTCTAGGGAGGGCAACTCAAAATCCCATTCTCTTTTAGACAGATTCTTTACTAATAAGGCTTGGGATGATGTGTTTGACAATTCAAGAGTTAGTA
GAAAAGCAAGACTATTTTCAGACCATTTTCCATTACTTCTTGAAGCTAGAGCAGTTACTTGGGGCCCATCACCATTTCGCTTCTGCAATAGCTGGATGAGGATTAAAGAT
TGCTCGAATTTAATTCAAACCACATTAACTCTTGACCGATCAGATGGGTGGGCTGGTTTTGCAATCAGCCTCAAGCTTCGCAAGGTGAAGGACAAAGTCAAAGCTTGGTT
TGGGGATTATGAGCTGGAAAGAAAAAGAAAAGAGAAAGACTTAATATCAGAATTGGCCTTTTTGATTCAAAAGCCGAGAGTGAAGAATTATCATCTGCAGAATTGGATAT
CAGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTCAAGAAACCAAAAGGCCCACCGTTGATATTCAGTTTATCAAAGCCATTTGGAGCTCTAATGTTATAGGTTGGACATTTGTGGAAACTTTTGGAAAATCAGGAGG
CATGCTCACTATGTGGGATGAAAGCAAGATTACGCCATTGGAATTCTTGAAAGGAGGCTACTCACTCTCGGTGAAGGTTATGACAAATTGCAAAATCACATGTTGGGTTA
CAAATGTGTACGGTGCAATTGTTAACAGGGAAAGAAGACATCTTTGGCTGAAACTTCTTTCAATTTTTTATTACTGTGAGGAATCTTGGTGTATTGGAGGGGACTTCAAC
ATAACAAGGTGGAGTCACGAGAGATTTCCCATAGGAAGAACTACAAGAGGTATGAGAAAGCTTAACTCTTTCATCCAATCAACAGGGCTGTTTGAAATCCCTTTATCAAA
TGGTCATTTCACATGGTCTAGGGAGGGCAACTCAAAATCCCATTCTCTTTTAGACAGATTCTTTACTAATAAGGCTTGGGATGATGTGTTTGACAATTCAAGAGTTAGTA
GAAAAGCAAGACTATTTTCAGACCATTTTCCATTACTTCTTGAAGCTAGAGCAGTTACTTGGGGCCCATCACCATTTCGCTTCTGCAATAGCTGGATGAGGATTAAAGAT
TGCTCGAATTTAATTCAAACCACATTAACTCTTGACCGATCAGATGGGTGGGCTGGTTTTGCAATCAGCCTCAAGCTTCGCAAGGTGAAGGACAAAGTCAAAGCTTGGTT
TGGGGATTATGAGCTGGAAAGAAAAAGAAAAGAGAAAGACTTAATATCAGAATTGGCCTTTTTGATTCAAAAGCCGAGAGTGAAGAATTATCATCTGCAGAATTGGATAT
CAGGCTAG
Protein sequenceShow/hide protein sequence
MIQETKRPTVDIQFIKAIWSSNVIGWTFVETFGKSGGMLTMWDESKITPLEFLKGGYSLSVKVMTNCKITCWVTNVYGAIVNRERRHLWLKLLSIFYYCEESWCIGGDFN
ITRWSHERFPIGRTTRGMRKLNSFIQSTGLFEIPLSNGHFTWSREGNSKSHSLLDRFFTNKAWDDVFDNSRVSRKARLFSDHFPLLLEARAVTWGPSPFRFCNSWMRIKD
CSNLIQTTLTLDRSDGWAGFAISLKLRKVKDKVKAWFGDYELERKRKEKDLISELAFLIQKPRVKNYHLQNWISG