; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003714 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003714
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionribosome maturation protein SBDS
Genome locationChr08:6641930..6644820
RNA-Seq ExpressionHG10003714
SyntenyHG10003714
Gene Ontology termsGO:0042256 - mature ribosome assembly (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002140 - Ribosome maturation protein Sdo1/SBDS
IPR003604 - Matrin/U1-C-like, C2H2-type zinc finger
IPR013087 - Zinc finger C2H2-type
IPR018023 - Ribosome maturation protein SBDS, conserved site
IPR018978 - Ribosome maturation protein Sdo1/SBDS, C-terminal
IPR019783 - Ribosome maturation protein Sdo1/SBDS, N-terminal
IPR036236 - Zinc finger C2H2 superfamily
IPR036786 - Ribosome maturation protein SBDS, N-terminal domain superfamily
IPR037188 - Ribosome maturation protein Sdo1/SBDS, central domain superfamily
IPR039100 - Ribosome maturation protein Sdo1/SBDS-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008466694.1 PREDICTED: ribosome maturation protein SBDS [Cucumis melo]1.9e-19294.15Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGK
        MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQ+AGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASII
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMR+RY+VPEQN PSLLDKLNAWSASI+
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASII

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQYDDDYENVELPPRQVKESESAIPQLSEALQKQTISVDGENAPKEGKRC
        SNDQSGNQQRSIICELDPSFYRDCNPLMSEL GRFEVLSFCLHEEGDTNVDQY+DDYENVEL PRQ+KE+ES+IPQLSEALQKQTISV+ +NAPKEGKRC
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQYDDDYENVELPPRQVKESESAIPQLSEALQKQTISVDGENAPKEGKRC

Query:  STCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSEEECRVELAMGDSESDLKEYSF
        STCNV VGDA +FREHHK +WHKHNVKRKTKNLPPL+EEEC VELAMGDSESDLKEYSF
Subjt:  STCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSEEECRVELAMGDSESDLKEYSF

XP_022936066.1 ribosome maturation protein SBDS [Cucurbita moschata]1.8e-19094.44Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGK
        MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAF TDDQ EICLKILKEGELQIAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASII
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRY VPEQN PSLLDKLN+WSASII
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASII

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQY-DDDYENVELPPRQVKESESAIPQLSEALQKQTISVDGENAPKEGKR
        SNDQSGNQQRS+ICELDPSFYRDCNPLMSELQG+FEVLSFCLHEEGDTNVDQY DDD+ENVELPPR VKESESAIPQLSEALQKQ ISVDG N  KEGKR
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQY-DDDYENVELPPRQVKESESAIPQLSEALQKQTISVDGENAPKEGKR

Query:  CSTCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSEEECRVELAMGDSESDLKEYSF
        CSTCNVVVGDA QFREHHK EWHKHNVKRKTKNLPPL+EEEC VE+AMGDSESDLKEYSF
Subjt:  CSTCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSEEECRVELAMGDSESDLKEYSF

XP_022975304.1 ribosome maturation protein SBDS [Cucurbita maxima]5.1e-19093.89Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGK
        MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAF TDDQ EICLKILKEGELQIAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASII
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRY VPEQN PSLLDKLN+WSASII
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASII

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQY-DDDYENVELPPRQVKESESAIPQLSEALQKQTISVDGENAPKEGKR
        SNDQSGNQQRS+ICELDPSFYRDCNPLMSELQG+FEVLSFCLHEEGDTNVDQY DDD+ENVELPPR VKESESAIPQLSEALQKQ ISVDG N  KEGKR
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQY-DDDYENVELPPRQVKESESAIPQLSEALQKQTISVDGENAPKEGKR

Query:  CSTCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSEEECRVELAMGDSESDLKEYSF
        CSTCNVVVGDA QFREHHK EWHKHN+KRKTKNLPPL+EEEC VE+A+GDSESDLKEYSF
Subjt:  CSTCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSEEECRVELAMGDSESDLKEYSF

XP_023535044.1 ribosome maturation protein SBDS [Cucurbita pepo subsp. pepo]3.0e-19094.72Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGK
        MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAF TDDQ EICLKILKEGELQIAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASII
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRY VPEQN PSLLDKLNAWSASII
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASII

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQY-DDDYENVELPPRQVKESESAIPQLSEALQKQTISVDGENAPKEGKR
        SND SGNQQRSIICELDPSFYRDCNPLMSELQG+FEVLSFCLHEEGDTNVDQY DDD+ENVELPPR VKESESAIPQLSEALQKQ ISVDG N  KEGKR
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQY-DDDYENVELPPRQVKESESAIPQLSEALQKQTISVDGENAPKEGKR

Query:  CSTCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSEEECRVELAMGDSESDLKEYSF
        CSTCNVVVGDA QFREHHK EWHKHNVKRKTKNLPPL+EEEC VE+AMGDSESDLKEYSF
Subjt:  CSTCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSEEECRVELAMGDSESDLKEYSF

XP_038886377.1 ribosome maturation protein SBDS [Benincasa hispida]3.1e-19596.66Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGK
        MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAF TDDQTEICLKILKEGELQIAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASII
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRY+VPEQN PSLLDKLNAWSASII
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASII

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQYDDDYENVELPPRQVKESESAIPQLSEALQKQTISVDGENAPKEGKRC
        SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQYDDDYENVELPPRQVKESESAIPQL+EALQKQTISV+ ENA KEGKRC
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQYDDDYENVELPPRQVKESESAIPQLSEALQKQTISVDGENAPKEGKRC

Query:  STCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSEEECRVELAMGDSESDLKEYSF
        STCNVVVGDA QFREHHK EWHKHNVKRKTKNLPPL+EEEC VELAMGD+ESDLKEYSF
Subjt:  STCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSEEECRVELAMGDSESDLKEYSF

TrEMBL top hitse value%identityAlignment
A0A0A0KIY6 C2H2-type domain-containing protein4.2e-19092.2Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGK
        MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVE+DLDEVLQSQIVYSNVSKGVLAKTK+LKAAFGTDDQTEICLKILKEGELQ+AGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASII
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMR+IHFAVDPNHSSKKQALEVIHELQK FPIKRSPMR+RY+VPEQN PSLLDKLNAWSASI+
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASII

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQYDDDYENVELPPRQVKESESAIPQLSEALQKQTISVDGENAPKEGKRC
        S+DQSGNQQRSIICELDPSFYRDCNPLMSEL GRFEVLSFCLHEEGDTNVDQY+DDYENVELPPRQ+KE++S IPQLSEALQKQTIS++ +NAPKEGKRC
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQYDDDYENVELPPRQVKESESAIPQLSEALQKQTISVDGENAPKEGKRC

Query:  STCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSEEECRVELAMGDSESDLKEYSF
        STCNV VGD  +FREH+K EWHKHNVKRKTKNLPPL+EEEC VELAMGDSESDLKEYSF
Subjt:  STCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSEEECRVELAMGDSESDLKEYSF

A0A1S3CRW0 ribosome maturation protein SBDS9.1e-19394.15Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGK
        MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQ+AGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASII
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMR+RY+VPEQN PSLLDKLNAWSASI+
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASII

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQYDDDYENVELPPRQVKESESAIPQLSEALQKQTISVDGENAPKEGKRC
        SNDQSGNQQRSIICELDPSFYRDCNPLMSEL GRFEVLSFCLHEEGDTNVDQY+DDYENVEL PRQ+KE+ES+IPQLSEALQKQTISV+ +NAPKEGKRC
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQYDDDYENVELPPRQVKESESAIPQLSEALQKQTISVDGENAPKEGKRC

Query:  STCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSEEECRVELAMGDSESDLKEYSF
        STCNV VGDA +FREHHK +WHKHNVKRKTKNLPPL+EEEC VELAMGDSESDLKEYSF
Subjt:  STCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSEEECRVELAMGDSESDLKEYSF

A0A5A7UXA4 Ribosome maturation protein SBDS9.1e-19394.15Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGK
        MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQ+AGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASII
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMR+RY+VPEQN PSLLDKLNAWSASI+
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASII

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQYDDDYENVELPPRQVKESESAIPQLSEALQKQTISVDGENAPKEGKRC
        SNDQSGNQQRSIICELDPSFYRDCNPLMSEL GRFEVLSFCLHEEGDTNVDQY+DDYENVEL PRQ+KE+ES+IPQLSEALQKQTISV+ +NAPKEGKRC
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQYDDDYENVELPPRQVKESESAIPQLSEALQKQTISVDGENAPKEGKRC

Query:  STCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSEEECRVELAMGDSESDLKEYSF
        STCNV VGDA +FREHHK +WHKHNVKRKTKNLPPL+EEEC VELAMGDSESDLKEYSF
Subjt:  STCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSEEECRVELAMGDSESDLKEYSF

A0A6J1F6G6 ribosome maturation protein SBDS8.6e-19194.44Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGK
        MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAF TDDQ EICLKILKEGELQIAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASII
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRY VPEQN PSLLDKLN+WSASII
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASII

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQY-DDDYENVELPPRQVKESESAIPQLSEALQKQTISVDGENAPKEGKR
        SNDQSGNQQRS+ICELDPSFYRDCNPLMSELQG+FEVLSFCLHEEGDTNVDQY DDD+ENVELPPR VKESESAIPQLSEALQKQ ISVDG N  KEGKR
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQY-DDDYENVELPPRQVKESESAIPQLSEALQKQTISVDGENAPKEGKR

Query:  CSTCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSEEECRVELAMGDSESDLKEYSF
        CSTCNVVVGDA QFREHHK EWHKHNVKRKTKNLPPL+EEEC VE+AMGDSESDLKEYSF
Subjt:  CSTCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSEEECRVELAMGDSESDLKEYSF

A0A6J1IK36 ribosome maturation protein SBDS2.5e-19093.89Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGK
        MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAF TDDQ EICLKILKEGELQIAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASII
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRY VPEQN PSLLDKLN+WSASII
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASII

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQY-DDDYENVELPPRQVKESESAIPQLSEALQKQTISVDGENAPKEGKR
        SNDQSGNQQRS+ICELDPSFYRDCNPLMSELQG+FEVLSFCLHEEGDTNVDQY DDD+ENVELPPR VKESESAIPQLSEALQKQ ISVDG N  KEGKR
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQY-DDDYENVELPPRQVKESESAIPQLSEALQKQTISVDGENAPKEGKR

Query:  CSTCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSEEECRVELAMGDSESDLKEYSF
        CSTCNVVVGDA QFREHHK EWHKHN+KRKTKNLPPL+EEEC VE+A+GDSESDLKEYSF
Subjt:  CSTCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSEEECRVELAMGDSESDLKEYSF

SwissProt top hitse value%identityAlignment
P70122 Ribosome maturation protein SBDS1.5e-6755.47Show/hide
Query:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGKERE
        S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVSKG +AK +DL +AFGTDDQTEIC +IL +GE+Q++ KER 
Subjt:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGKERE

Query:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASIISND
         QL   FRDIATIV  K  NPETKRPYT+ +IER M++IH++V PN S+K+QALEVI +L+++  I+R+ MR+R+++P      L +KL      + S D
Subjt:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASIISND

Query:  QSGNQQRSIICELDPSFYRDCNPLM-SELQGR--FEVLSFCLHEEGD
         S  QQ  I+C +DP  +R+ + L+  E +GR   EVLS    EEGD
Subjt:  QSGNQQRSIICELDPSFYRDCNPLM-SELQGR--FEVLSFCLHEEGD

Q3SWZ6 Ribosome maturation protein SBDS4.4e-6754.66Show/hide
Query:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGKERE
        S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVSKG +AK +DL +AFGTDDQTEIC +IL +GE+Q++ KER 
Subjt:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGKERE

Query:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASIISND
         QL   FRDIATIV  K  NPETKRPYT+ +IER M++IH++V PN S+K+QALEVI +L+++  I+R+ MR+R+++P      L +KL      I S D
Subjt:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASIISND

Query:  QSGNQQRSIICELDPSFYRDCNPLM---SELQGRFEVLSFCLHEEGD
            QQ  I+C +DP  +R+ + L+   ++ +G  EVLS    EEGD
Subjt:  QSGNQQRSIICELDPSFYRDCNPLM---SELQGRFEVLSFCLHEEGD

Q5RAZ2 Ribosome maturation protein SBDS8.3e-6653.85Show/hide
Query:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGKERE
        S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVSKG +AK +DL +AFGTDDQTEIC +IL +GE+Q++ KER 
Subjt:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGKERE

Query:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASIISND
         QL   FRDIATIV  K  NPETKRPYT+ +IER M++IH++V  N S+K+QALEVI +L+++  I+R+ MR+R+++P      L +KL      I S D
Subjt:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASIISND

Query:  QSGNQQRSIICELDPSFYRDCNPLM---SELQGRFEVLSFCLHEEGD
            QQ  I+C +DP  +R+ + L+   ++ +G  EVL+    EEGD
Subjt:  QSGNQQRSIICELDPSFYRDCNPLM---SELQGRFEVLSFCLHEEGD

Q5RK30 Ribosome maturation protein SBDS3.4e-6754.66Show/hide
Query:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGKERE
        S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVSKG +AK +DL +AFGTDDQTEIC +IL +GE+Q++ KER 
Subjt:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGKERE

Query:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASIISND
         QL   FRDIATIV  K  NPETKRPYT+ +IER M++IH++V PN S+K+QALEVI +L+++  I+R+ MR+R+++P      L +KL      + S D
Subjt:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASIISND

Query:  QSGNQQRSIICELDPSFYRDCNPLM---SELQGRFEVLSFCLHEEGD
         S  QQ  I+C +DP  +R+ + L+   ++ +G  EVLS    EEGD
Subjt:  QSGNQQRSIICELDPSFYRDCNPLM---SELQGRFEVLSFCLHEEGD

Q9Y3A5 Ribosome maturation protein SBDS8.3e-6653.85Show/hide
Query:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGKERE
        S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVSKG +AK +DL +AFGTDDQTEIC +IL +GE+Q++ KER 
Subjt:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGKERE

Query:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASIISND
         QL   FRDIATIV  K  NPETKRPYT+ +IER M++IH++V  N S+K+QALEVI +L+++  I+R+ MR+R+++P      L +KL      I S D
Subjt:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASIISND

Query:  QSGNQQRSIICELDPSFYRDCNPLM---SELQGRFEVLSFCLHEEGD
            QQ  I+C +DP  +R+ + L+   ++ +G  EVL+    EEGD
Subjt:  QSGNQQRSIICELDPSFYRDCNPLM---SELQGRFEVLSFCLHEEGD

Arabidopsis top hitse value%identityAlignment
AT1G43860.1 sequence-specific DNA binding transcription factors3.2e-12961.56Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGK
        MS++LVQP+GQKRLTNVAVVRLKK G RFEIACYKNKVLSWRSGVEKD+DEVLQS  VYSNVSKGVLAK+KDL  +FG+DD T+IC+ IL++GELQ+AGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASII
        ERE+Q S+QFRDIATIVMQKT NPET+RPYTISM+ERLM EIHFAVDP+ +SKKQAL+VI ELQK FPIKRSPMR+R  VP QN PSLL+KL  W  S++
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASII

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQYDDDYENVELPPR--------QVKESESAIPQLSEALQKQTISVDGE-
        S D+SG Q  S +CE++P  +R+C+  +  +QGR E+L+  +H EGDT++D Y D+++++ L           + K+    + +LS+ LQKQ IS     
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQYDDDYENVELPPR--------QVKESESAIPQLSEALQKQTISVDGE-

Query:  ----NAPKEGKRCSTCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSEEECRVELAMGDSESDLKEYSF
               K+G +CSTCN  VG+A Q+REH K +WHKHN+KRKT+ LPP+S +EC  E+ M DS +DLK+YSF
Subjt:  ----NAPKEGKRCSTCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSEEECRVELAMGDSESDLKEYSF

AT2G24500.1 Zinc finger protein 6224.1e-0440.48Show/hide
Query:  GKRCSTCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSE
        G  C++CN    D A+ + H+K EWH++N+KRK   +P ++E
Subjt:  GKRCSTCNVVVGDAAQFREHHKGEWHKHNVKRKTKNLPPLSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCGATCGTTGGTGCAGCCGATCGGGCAGAAGAGGCTGACCAACGTCGCGGTGGTTCGTTTGAAGAAACATGGTCTTCGCTTCGAGATTGCCTGTTACAAGAACAA
GGTCCTTTCTTGGCGTTCTGGCGTGGAAAAGGATTTGGATGAGGTCTTGCAATCGCAAATTGTTTATTCAAATGTTTCGAAAGGAGTTCTTGCAAAAACAAAAGATTTAA
AAGCAGCTTTTGGTACAGATGATCAGACGGAAATTTGTTTGAAGATTCTTAAAGAAGGGGAACTTCAAATTGCAGGGAAGGAGAGGGAGGCTCAATTATCTAATCAGTTT
CGTGATATCGCAACTATTGTTATGCAGAAGACCTTCAATCCTGAAACTAAACGCCCTTACACCATTAGCATGATTGAGCGACTCATGCGTGAAATTCATTTCGCTGTTGA
TCCAAACCACAGCTCAAAGAAACAGGCACTAGAGGTCATTCATGAGCTCCAGAAACAGTTCCCAATTAAACGTTCACCTATGAGAATACGATATGTTGTACCTGAACAGA
ACTCCCCATCTCTCCTTGATAAGTTAAATGCTTGGAGTGCTAGTATCATTTCCAATGATCAGTCTGGAAATCAGCAACGAAGCATTATTTGTGAATTGGATCCTAGCTTT
TATCGAGACTGTAATCCATTAATGAGTGAACTACAAGGCAGATTTGAAGTTCTCTCTTTTTGTTTGCACGAGGAAGGGGACACCAATGTGGATCAATACGATGATGATTA
TGAGAATGTGGAACTGCCACCAAGGCAAGTCAAGGAATCGGAATCAGCTATTCCTCAGCTAAGTGAAGCTTTACAAAAACAGACAATCTCTGTTGACGGGGAGAATGCCC
CAAAGGAAGGAAAACGCTGCAGCACATGCAACGTAGTCGTGGGGGATGCTGCTCAGTTTAGAGAGCATCACAAGGGTGAATGGCATAAGCATAACGTCAAGCGCAAAACC
AAGAATCTTCCGCCTCTAAGCGAAGAAGAGTGCAGGGTAGAATTGGCAATGGGTGATTCAGAGTCCGACCTGAAGGAGTATTCATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCCGATCGTTGGTGCAGCCGATCGGGCAGAAGAGGCTGACCAACGTCGCGGTGGTTCGTTTGAAGAAACATGGTCTTCGCTTCGAGATTGCCTGTTACAAGAACAA
GGTCCTTTCTTGGCGTTCTGGCGTGGAAAAGGATTTGGATGAGGTCTTGCAATCGCAAATTGTTTATTCAAATGTTTCGAAAGGAGTTCTTGCAAAAACAAAAGATTTAA
AAGCAGCTTTTGGTACAGATGATCAGACGGAAATTTGTTTGAAGATTCTTAAAGAAGGGGAACTTCAAATTGCAGGGAAGGAGAGGGAGGCTCAATTATCTAATCAGTTT
CGTGATATCGCAACTATTGTTATGCAGAAGACCTTCAATCCTGAAACTAAACGCCCTTACACCATTAGCATGATTGAGCGACTCATGCGTGAAATTCATTTCGCTGTTGA
TCCAAACCACAGCTCAAAGAAACAGGCACTAGAGGTCATTCATGAGCTCCAGAAACAGTTCCCAATTAAACGTTCACCTATGAGAATACGATATGTTGTACCTGAACAGA
ACTCCCCATCTCTCCTTGATAAGTTAAATGCTTGGAGTGCTAGTATCATTTCCAATGATCAGTCTGGAAATCAGCAACGAAGCATTATTTGTGAATTGGATCCTAGCTTT
TATCGAGACTGTAATCCATTAATGAGTGAACTACAAGGCAGATTTGAAGTTCTCTCTTTTTGTTTGCACGAGGAAGGGGACACCAATGTGGATCAATACGATGATGATTA
TGAGAATGTGGAACTGCCACCAAGGCAAGTCAAGGAATCGGAATCAGCTATTCCTCAGCTAAGTGAAGCTTTACAAAAACAGACAATCTCTGTTGACGGGGAGAATGCCC
CAAAGGAAGGAAAACGCTGCAGCACATGCAACGTAGTCGTGGGGGATGCTGCTCAGTTTAGAGAGCATCACAAGGGTGAATGGCATAAGCATAACGTCAAGCGCAAAACC
AAGAATCTTCCGCCTCTAAGCGAAGAAGAGTGCAGGGTAGAATTGGCAATGGGTGATTCAGAGTCCGACCTGAAGGAGTATTCATTTTGA
Protein sequenceShow/hide protein sequence
MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQIAGKEREAQLSNQF
RDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYVVPEQNSPSLLDKLNAWSASIISNDQSGNQQRSIICELDPSF
YRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQYDDDYENVELPPRQVKESESAIPQLSEALQKQTISVDGENAPKEGKRCSTCNVVVGDAAQFREHHKGEWHKHNVKRKT
KNLPPLSEEECRVELAMGDSESDLKEYSF