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HG10003740 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003740
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 3-like
Genome locationChr08:7658382..7658678
RNA-Seq ExpressionHG10003740
SyntenyHG10003740
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062727.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]1.6e-0546.3Show/hide
Query:  LQHDLISKLDDILNIEKLEIFVCTGHKECLKKDLGVTDDTDVKWVHHIISANVE
        +   L S L  I+++  ++I++C G  EC KKDL + +D DVKWV+HII++NVE
Subjt:  LQHDLISKLDDILNIEKLEIFVCTGHKECLKKDLGVTDDTDVKWVHHIISANVE

TYK22525.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]1.6e-0546.3Show/hide
Query:  LQHDLISKLDDILNIEKLEIFVCTGHKECLKKDLGVTDDTDVKWVHHIISANVE
        +   L S L  I+++  ++I++C G  EC KKDL + +D DVKWV+HII++NVE
Subjt:  LQHDLISKLDDILNIEKLEIFVCTGHKECLKKDLGVTDDTDVKWVHHIISANVE

XP_022155207.1 uncharacterized protein LOC111022347 [Momordica charantia]1.7e-0732.93Show/hide
Query:  VSVYYDGYFNELENYVNYRVSNVVLHAQMSFQELQHDLISKLDDILNIEKLEIFVCTGHKECLKKDLGVTDDTDVKWVHHII
        +S+++ G++N+ +NYV Y+VS +++H +MS+ +L  D++ +L  + + +  +IF C G  + + KD+ ++DD DV W++++I
Subjt:  VSVYYDGYFNELENYVNYRVSNVVLHAQMSFQELQHDLISKLDDILNIEKLEIFVCTGHKECLKKDLGVTDDTDVKWVHHII

XP_038889205.1 probable polygalacturonase At1g80170 [Benincasa hispida]1.7e-1038.82Show/hide
Query:  VSVYYDGYFNELENY-VNYRVSNVVLHAQMSFQELQHDLISKLDDILNIEKLEIFVCTGHKECLKKDLGVTDDTDVKWVHHIISA
        V + YD  FNE +NY ++Y+V+ +  H QMSF E Q  ++ K+  + N   +EI  C G K+ +KKDL + +D D++W+ ++IS+
Subjt:  VSVYYDGYFNELENY-VNYRVSNVVLHAQMSFQELQHDLISKLDDILNIEKLEIFVCTGHKECLKKDLGVTDDTDVKWVHHIISA

TrEMBL top hitse value%identityAlignment
A0A5A7V6U1 Protein FAR1-RELATED SEQUENCE 3-like7.9e-0646.3Show/hide
Query:  LQHDLISKLDDILNIEKLEIFVCTGHKECLKKDLGVTDDTDVKWVHHIISANVE
        +   L S L  I+++  ++I++C G  EC KKDL + +D DVKWV+HII++NVE
Subjt:  LQHDLISKLDDILNIEKLEIFVCTGHKECLKKDLGVTDDTDVKWVHHIISANVE

A0A5D3DG45 Protein FAR1-RELATED SEQUENCE 3-like7.9e-0646.3Show/hide
Query:  LQHDLISKLDDILNIEKLEIFVCTGHKECLKKDLGVTDDTDVKWVHHIISANVE
        +   L S L  I+++  ++I++C G  EC KKDL + +D DVKWV+HII++NVE
Subjt:  LQHDLISKLDDILNIEKLEIFVCTGHKECLKKDLGVTDDTDVKWVHHIISANVE

A0A6J1DNQ8 uncharacterized protein LOC1110223478.5e-0832.93Show/hide
Query:  VSVYYDGYFNELENYVNYRVSNVVLHAQMSFQELQHDLISKLDDILNIEKLEIFVCTGHKECLKKDLGVTDDTDVKWVHHII
        +S+++ G++N+ +NYV Y+VS +++H +MS+ +L  D++ +L  + + +  +IF C G  + + KD+ ++DD DV W++++I
Subjt:  VSVYYDGYFNELENYVNYRVSNVVLHAQMSFQELQHDLISKLDDILNIEKLEIFVCTGHKECLKKDLGVTDDTDVKWVHHII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACATTGTTTTGCTACGGGCCATTCGATCGTCTCTGTTTATTACGATGGCTATTTCAATGAATTGGAAAACTATGTTAATTACAGAGTATCAAATGTTGTTTTACA
CGCGCAAATGTCCTTTCAAGAATTACAACATGATTTAATATCCAAGTTAGACGATATATTGAATATAGAGAAACTTGAGATATTTGTGTGTACAGGACATAAAGAATGTT
TGAAGAAGGATTTGGGTGTTACAGATGATACTGATGTCAAATGGGTTCACCACATAATATCTGCCAATGTTGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTACATTGTTTTGCTACGGGCCATTCGATCGTCTCTGTTTATTACGATGGCTATTTCAATGAATTGGAAAACTATGTTAATTACAGAGTATCAAATGTTGTTTTACA
CGCGCAAATGTCCTTTCAAGAATTACAACATGATTTAATATCCAAGTTAGACGATATATTGAATATAGAGAAACTTGAGATATTTGTGTGTACAGGACATAAAGAATGTT
TGAAGAAGGATTTGGGTGTTACAGATGATACTGATGTCAAATGGGTTCACCACATAATATCTGCCAATGTTGAATAA
Protein sequenceShow/hide protein sequence
MLHCFATGHSIVSVYYDGYFNELENYVNYRVSNVVLHAQMSFQELQHDLISKLDDILNIEKLEIFVCTGHKECLKKDLGVTDDTDVKWVHHIISANVE