; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003767 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003767
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein Ycf2-like
Genome locationChr08:8338276..8340191
RNA-Seq ExpressionHG10003767
SyntenyHG10003767
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033753.1 protein Ycf2-like [Cucumis melo var. makuwa]5.9e-1230.43Show/hide
Query:  DRKELEICPLLATPEEMNMSYFASFLEDEKRVMKEVEEELSKYMPKERVVELSLNKGL--AYGNDVRFERIKRIQES---MRKTMEEKFEEMKIGREILT
        D   LE+ P+LATP ++ M YFA F+E EK ++KE E+EL K    + +  +SLN+G+    G DV  + +++I+ S   M  ++E   E +K     + 
Subjt:  DRKELEICPLLATPEEMNMSYFASFLEDEKRVMKEVEEELSKYMPKERVVELSLNKGL--AYGNDVRFERIKRIQES---MRKTMEEKFEEMKIGREILT

Query:  KKIDNLVETLKTMIDYMKNTLVGATHALTSNLYMAASEFEQELDEIEKEQEE---KEFVDHSDPPIIIQRKDDDQDDEGQGKKD
         + + L + +  +I+ +K+    ++    ++ +M A  FE+ L+++E++QEE   K    +S  P ++ ++DDD+D + +G  D
Subjt:  KKIDNLVETLKTMIDYMKNTLVGATHALTSNLYMAASEFEQELDEIEKEQEE---KEFVDHSDPPIIIQRKDDDQDDEGQGKKD

KAA0035989.1 protein Ycf2-like [Cucumis melo var. makuwa]4.9e-1431.55Show/hide
Query:  DRKELEICPLLATPEEMNMSYFASFLEDEKRVMKEVEEELSKYMPKERVVELSLNKGL--AYGNDV---RFERIKRIQESMRKTMEEKFEEMKIGREILT
        D   LE+ P+LATP E+ M YFA F+E EK ++KE E+EL K    + +  +SLN+G+    G DV     ++I+  Q+ M  ++E   E +K     L 
Subjt:  DRKELEICPLLATPEEMNMSYFASFLEDEKRVMKEVEEELSKYMPKERVVELSLNKGL--AYGNDV---RFERIKRIQESMRKTMEEKFEEMKIGREILT

Query:  KKIDNLVETLKTMIDYMKNTLVGATHALTSNLYMAASEFEQELDEIEKEQEEKEFVD---HSDPPIIIQRKDDDQDDEGQGKKDPQS
         + + L + +  +I+ +++    ++    ++ +M A  FE+ LD++E +QEE +  D    S  P ++ ++DDD+D  G+G  D ++
Subjt:  KKIDNLVETLKTMIDYMKNTLVGATHALTSNLYMAASEFEQELDEIEKEQEEKEFVD---HSDPPIIIQRKDDDQDDEGQGKKDPQS

TYK30414.1 protein Ycf2-like [Cucumis melo var. makuwa]4.9e-1431.55Show/hide
Query:  DRKELEICPLLATPEEMNMSYFASFLEDEKRVMKEVEEELSKYMPKERVVELSLNKGL--AYGNDV---RFERIKRIQESMRKTMEEKFEEMKIGREILT
        D   LE+ P+LATP E+ M YFA F+E EK ++KE E+EL K    + +  +SLN+G+    G DV     ++I+  Q+ M  ++E   E +K     L 
Subjt:  DRKELEICPLLATPEEMNMSYFASFLEDEKRVMKEVEEELSKYMPKERVVELSLNKGL--AYGNDV---RFERIKRIQESMRKTMEEKFEEMKIGREILT

Query:  KKIDNLVETLKTMIDYMKNTLVGATHALTSNLYMAASEFEQELDEIEKEQEEKEFVD---HSDPPIIIQRKDDDQDDEGQGKKDPQS
         + + L + +  +I+ +++    ++    ++ +M A  FE+ LD++E +QEE +  D    S  P ++ ++DDD+D  G+G  D ++
Subjt:  KKIDNLVETLKTMIDYMKNTLVGATHALTSNLYMAASEFEQELDEIEKEQEEKEFVD---HSDPPIIIQRKDDDQDDEGQGKKDPQS

XP_038876741.1 cilia- and flagella-associated protein 251-like [Benincasa hispida]4.9e-1434.98Show/hide
Query:  EETKENEEANSESHGDIIETEKTSSSKESDKKKHKKGKKVKSSKEKAKGKQIKREKGIAPLRDDRKELEICPLLATPEEMNMSYFASFLEDEKRVMKEVE
        +E+K+NEE  S+S G+  ++EK SSS E DKK            E  KGK+      +     D  ELEICPLLATP EM M YFA F+E+EKRV++EVE
Subjt:  EETKENEEANSESHGDIIETEKTSSSKESDKKKHKKGKKVKSSKEKAKGKQIKREKGIAPLRDDRKELEICPLLATPEEMNMSYFASFLEDEKRVMKEVE

Query:  EELSKYMPKERVVELSLNKGLAYGNDVRFERIKRIQESMRKTMEEKFEEMKIGREILTKKIDNLVETLKTMIDYMKNTLVGATHALTSNLYMAASEFEQE
        EE+SKY PKERV+                                                                                    E+E
Subjt:  EELSKYMPKERVVELSLNKGLAYGNDVRFERIKRIQESMRKTMEEKFEEMKIGREILTKKIDNLVETLKTMIDYMKNTLVGATHALTSNLYMAASEFEQE

Query:  LDEIEKEQEEK----EFVDHSDPPIIIQRKDDDQDDEGQGKKD
        LD IEKEQEEK    E VD S+   ++QRKDDD+D+EG G  D
Subjt:  LDEIEKEQEEK----EFVDHSDPPIIIQRKDDDQDDEGQGKKD

XP_038887714.1 cilia- and flagella-associated protein 251-like [Benincasa hispida]5.1e-4853.44Show/hide
Query:  EETKENEEANSESHGDIIETEKTSSSKESDKKKHKKGKKVKSSKEKAKGKQIKREKGIAPLRDDRKELEICPLLATPEEMNMSYFASFLEDEKRVMKEVE
        +E+K+NEE  S+S G+   +EK SSS +SDK+   K                   KG        KELEICPLLATP+EM MSYFA F+ +EK+V++EVE
Subjt:  EETKENEEANSESHGDIIETEKTSSSKESDKKKHKKGKKVKSSKEKAKGKQIKREKGIAPLRDDRKELEICPLLATPEEMNMSYFASFLEDEKRVMKEVE

Query:  EELSKYMPKERVVELSLNK--GLAYGND--VRFERIKRIQESMRKTMEEKFEEMKIGREILTKKIDNLVETLKTMIDYMKNTLVGATHALTSNLYMAASE
        EE+S+Y P++RVVELSLN+  GL++  D   RFE I +IQ+ M   M+E F+ MKI + ILTKKID+LVE+LK MIDYMK      +HA TSNL+M  S+
Subjt:  EELSKYMPKERVVELSLNK--GLAYGND--VRFERIKRIQESMRKTMEEKFEEMKIGREILTKKIDNLVETLKTMIDYMKNTLVGATHALTSNLYMAASE

Query:  FEQELDEIEKEQEEKE----FVDHSDPPIIIQRKDDDQDDEGQGKKD
        FE+ELD IEKEQEEKE     VD  D P II+RKDDD+D+EGQG KD
Subjt:  FEQELDEIEKEQEEKE----FVDHSDPPIIIQRKDDDQDDEGQGKKD

TrEMBL top hitse value%identityAlignment
A0A5A7STD7 Protein Ycf2-like2.9e-1230.43Show/hide
Query:  DRKELEICPLLATPEEMNMSYFASFLEDEKRVMKEVEEELSKYMPKERVVELSLNKGL--AYGNDVRFERIKRIQES---MRKTMEEKFEEMKIGREILT
        D   LE+ P+LATP ++ M YFA F+E EK ++KE E+EL K    + +  +SLN+G+    G DV  + +++I+ S   M  ++E   E +K     + 
Subjt:  DRKELEICPLLATPEEMNMSYFASFLEDEKRVMKEVEEELSKYMPKERVVELSLNKGL--AYGNDVRFERIKRIQES---MRKTMEEKFEEMKIGREILT

Query:  KKIDNLVETLKTMIDYMKNTLVGATHALTSNLYMAASEFEQELDEIEKEQEE---KEFVDHSDPPIIIQRKDDDQDDEGQGKKD
         + + L + +  +I+ +K+    ++    ++ +M A  FE+ L+++E++QEE   K    +S  P ++ ++DDD+D + +G  D
Subjt:  KKIDNLVETLKTMIDYMKNTLVGATHALTSNLYMAASEFEQELDEIEKEQEE---KEFVDHSDPPIIIQRKDDDQDDEGQGKKD

A0A5A7T3K3 Protein Ycf2-like2.4e-1431.55Show/hide
Query:  DRKELEICPLLATPEEMNMSYFASFLEDEKRVMKEVEEELSKYMPKERVVELSLNKGL--AYGNDV---RFERIKRIQESMRKTMEEKFEEMKIGREILT
        D   LE+ P+LATP E+ M YFA F+E EK ++KE E+EL K    + +  +SLN+G+    G DV     ++I+  Q+ M  ++E   E +K     L 
Subjt:  DRKELEICPLLATPEEMNMSYFASFLEDEKRVMKEVEEELSKYMPKERVVELSLNKGL--AYGNDV---RFERIKRIQESMRKTMEEKFEEMKIGREILT

Query:  KKIDNLVETLKTMIDYMKNTLVGATHALTSNLYMAASEFEQELDEIEKEQEEKEFVD---HSDPPIIIQRKDDDQDDEGQGKKDPQS
         + + L + +  +I+ +++    ++    ++ +M A  FE+ LD++E +QEE +  D    S  P ++ ++DDD+D  G+G  D ++
Subjt:  KKIDNLVETLKTMIDYMKNTLVGATHALTSNLYMAASEFEQELDEIEKEQEEKEFVD---HSDPPIIIQRKDDDQDDEGQGKKDPQS

A0A5A7VDS7 Protein Ycf2-like3.8e-1228.18Show/hide
Query:  DRKELEICPLLATPEEMNMSYFASFLEDEKRVMKEVEEELSKYMPKERVVELSLNKGLAYGNDVR-----FERIKRIQESMRKTMEEKFEEMKIGREILT
        D   LE+ P+L TP E+ M +FA F+E EK ++KE +++L K    + +  +SLNKG+   +++       E+I+  Q+ M   +E   E +K     + 
Subjt:  DRKELEICPLLATPEEMNMSYFASFLEDEKRVMKEVEEELSKYMPKERVVELSLNKGLAYGNDVR-----FERIKRIQESMRKTMEEKFEEMKIGREILT

Query:  KKIDNLVETLKTMIDYMKNTLVGATHALTSNLYMAASEFEQELDEIEKEQEEKEFVD---HSDPPIIIQRKDDDQDDEGQG
         + + LV+ +  +++ +++    ++    ++ +M A  FE+ LD++E+ QEE +  D    S    ++ ++DDD+D +G+G
Subjt:  KKIDNLVETLKTMIDYMKNTLVGATHALTSNLYMAASEFEQELDEIEKEQEEKEFVD---HSDPPIIIQRKDDDQDDEGQG

A0A5D3C4J5 Protein Ycf2-like3.8e-1228.18Show/hide
Query:  DRKELEICPLLATPEEMNMSYFASFLEDEKRVMKEVEEELSKYMPKERVVELSLNKGLAYGNDVR-----FERIKRIQESMRKTMEEKFEEMKIGREILT
        D   LE+ P+L TP E+ M +FA F+E EK ++KE +++L K    + +  +SLNKG+   +++       E+I+  Q+ M   +E   E +K     + 
Subjt:  DRKELEICPLLATPEEMNMSYFASFLEDEKRVMKEVEEELSKYMPKERVVELSLNKGLAYGNDVR-----FERIKRIQESMRKTMEEKFEEMKIGREILT

Query:  KKIDNLVETLKTMIDYMKNTLVGATHALTSNLYMAASEFEQELDEIEKEQEEKEFVD---HSDPPIIIQRKDDDQDDEGQG
         + + LV+ +  +++ +++    ++    ++ +M A  FE+ LD++E+ QEE +  D    S    ++ ++DDD+D +G+G
Subjt:  KKIDNLVETLKTMIDYMKNTLVGATHALTSNLYMAASEFEQELDEIEKEQEEKEFVD---HSDPPIIIQRKDDDQDDEGQG

A0A5D3E3E8 Protein Ycf2-like2.4e-1431.55Show/hide
Query:  DRKELEICPLLATPEEMNMSYFASFLEDEKRVMKEVEEELSKYMPKERVVELSLNKGL--AYGNDV---RFERIKRIQESMRKTMEEKFEEMKIGREILT
        D   LE+ P+LATP E+ M YFA F+E EK ++KE E+EL K    + +  +SLN+G+    G DV     ++I+  Q+ M  ++E   E +K     L 
Subjt:  DRKELEICPLLATPEEMNMSYFASFLEDEKRVMKEVEEELSKYMPKERVVELSLNKGL--AYGNDV---RFERIKRIQESMRKTMEEKFEEMKIGREILT

Query:  KKIDNLVETLKTMIDYMKNTLVGATHALTSNLYMAASEFEQELDEIEKEQEEKEFVD---HSDPPIIIQRKDDDQDDEGQGKKDPQS
         + + L + +  +I+ +++    ++    ++ +M A  FE+ LD++E +QEE +  D    S  P ++ ++DDD+D  G+G  D ++
Subjt:  KKIDNLVETLKTMIDYMKNTLVGATHALTSNLYMAASEFEQELDEIEKEQEEKEFVD---HSDPPIIIQRKDDDQDDEGQGKKDPQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAGGAAACAAAAGAAAATGAAGAAGCTAACTCAGAAAGTCATGGAGACATAATAGAGACAGAAAAAACATCTTCAAGCAAAGAGTCGGACAAAAAGAAACACAA
GAAAGGGAAAAAGGTTAAAAGTAGCAAAGAGAAAGCAAAGGGAAAACAAATCAAAAGGGAAAAAGGAATTGCACCATTACGAGATGATAGAAAGGAGCTTGAAATATGCC
CTTTGCTAGCAACCCCAGAAGAAATGAATATGTCATATTTTGCCTCATTTCTTGAGGATGAAAAAAGAGTGATGAAAGAGGTTGAAGAAGAATTGAGCAAGTATATGCCA
AAAGAAAGAGTGGTTGAGCTTTCATTGAATAAAGGACTCGCTTATGGGAATGATGTAAGGTTTGAACGCATAAAGAGGATACAAGAATCAATGAGAAAAACAATGGAGGA
AAAATTTGAGGAAATGAAGATTGGTAGAGAAATATTGACAAAGAAAATAGATAACTTGGTCGAAACATTGAAAACAATGATCGACTACATGAAAAATACACTTGTTGGTG
CAACACATGCTTTGACAAGTAATCTGTATATGGCAGCATCTGAATTTGAACAAGAACTTGATGAAATTGAGAAAGAACAGGAAGAAAAGGAGTTTGTTGATCATTCTGAT
CCTCCAATAATAATTCAAAGAAAAGATGATGACCAAGATGATGAAGGACAAGGAAAGAAGGACCCACAATCCACAATAGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTGAGGAAACAAAAGAAAATGAAGAAGCTAACTCAGAAAGTCATGGAGACATAATAGAGACAGAAAAAACATCTTCAAGCAAAGAGTCGGACAAAAAGAAACACAA
GAAAGGGAAAAAGGTTAAAAGTAGCAAAGAGAAAGCAAAGGGAAAACAAATCAAAAGGGAAAAAGGAATTGCACCATTACGAGATGATAGAAAGGAGCTTGAAATATGCC
CTTTGCTAGCAACCCCAGAAGAAATGAATATGTCATATTTTGCCTCATTTCTTGAGGATGAAAAAAGAGTGATGAAAGAGGTTGAAGAAGAATTGAGCAAGTATATGCCA
AAAGAAAGAGTGGTTGAGCTTTCATTGAATAAAGGACTCGCTTATGGGAATGATGTAAGGTTTGAACGCATAAAGAGGATACAAGAATCAATGAGAAAAACAATGGAGGA
AAAATTTGAGGAAATGAAGATTGGTAGAGAAATATTGACAAAGAAAATAGATAACTTGGTCGAAACATTGAAAACAATGATCGACTACATGAAAAATACACTTGTTGGTG
CAACACATGCTTTGACAAGTAATCTGTATATGGCAGCATCTGAATTTGAACAAGAACTTGATGAAATTGAGAAAGAACAGGAAGAAAAGGAGTTTGTTGATCATTCTGAT
CCTCCAATAATAATTCAAAGAAAAGATGATGACCAAGATGATGAAGGACAAGGAAAGAAGGACCCACAATCCACAATAGCATAG
Protein sequenceShow/hide protein sequence
MFEETKENEEANSESHGDIIETEKTSSSKESDKKKHKKGKKVKSSKEKAKGKQIKREKGIAPLRDDRKELEICPLLATPEEMNMSYFASFLEDEKRVMKEVEEELSKYMP
KERVVELSLNKGLAYGNDVRFERIKRIQESMRKTMEEKFEEMKIGREILTKKIDNLVETLKTMIDYMKNTLVGATHALTSNLYMAASEFEQELDEIEKEQEEKEFVDHSD
PPIIIQRKDDDQDDEGQGKKDPQSTIA