; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003779 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003779
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr08:8580272..8581036
RNA-Seq ExpressionHG10003779
SyntenyHG10003779
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592883.1 hypothetical protein SDJN03_12359, partial [Cucurbita argyrosperma subsp. sororia]1.7e-5454.28Show/hide
Query:  MEIGSLQKKRTQFFEEETQATSMAFI-----------TTPSVSSFKIPSFFLNTFRKRFDYCNTNIDGKEISSNIEKKKKCLIELASLFYKFFRGSKFSA
        MEIG L K R + F+EETQ  S+  I           TTPSVS  K+P+FFL  FRKRFDYC  NI  KE S  IE KKK L E+AS+F K F G K SA
Subjt:  MEIGSLQKKRTQFFEEETQATSMAFI-----------TTPSVSSFKIPSFFLNTFRKRFDYCNTNIDGKEISSNIEKKKKCLIELASLFYKFFRGSKFSA

Query:  CRFGSKIDGEHQDSSSESEVEEEDYRDGREFFFDG-----SETEKKFRENEKILSQSKFPVSILDVFSKKNAMDFNLSFIKSRICKGKNGNRNRNPDYDR
        C  G KIDG+  D  SESE   +DYR+ RE  F       SETE   R +EK  SQS+ P SILD+F K+N   FN +FIKSRICK K+G RNRN +Y++
Subjt:  CRFGSKIDGEHQDSSSESEVEEEDYRDGREFFFDG-----SETEKKFRENEKILSQSKFPVSILDVFSKKNAMDFNLSFIKSRICKGKNGNRNRNPDYDR

Query:  NLRENESATRL-SRENPKQ------------ERKNSTAISYHEDDENRERLWQKRILMGERCKPVMNTS
        NLR NESA    +REN K+            + K STAISYHE DEN +RLWQKRILMG RCKP+ NTS
Subjt:  NLRENESATRL-SRENPKQ------------ERKNSTAISYHEDDENRERLWQKRILMGERCKPVMNTS

KAG6607704.1 hypothetical protein SDJN03_01046, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0544.23Show/hide
Query:  MEIGSLQKKRTQFFEEETQATSMAFI-----------TTPSVSSFKIPSFFL----NTFRKRFDYCNTNIDGKEISSNIE-KKKKCLIELASLFYKFFRG
        MEIG L K R + F+EETQ  S+  I           TTPSVS  K+P+FFL     TFRK+ D     I  ++  ++IE +KKK L E+AS+F K F G
Subjt:  MEIGSLQKKRTQFFEEETQATSMAFI-----------TTPSVSSFKIPSFFL----NTFRKRFDYCNTNIDGKEISSNIE-KKKKCLIELASLFYKFFRG

Query:  SKFS
         K S
Subjt:  SKFS

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCGGTTCCCTGCAAAAGAAGAGAACACAATTTTTTGAAGAAGAAACTCAAGCTACATCCATGGCTTTCATCACCACTCCTTCCGTTTCTTCCTTCAAGATCCC
ATCGTTCTTTCTCAACACCTTCCGAAAAAGATTCGATTACTGCAACACTAACATCGACGGAAAAGAAATTTCGAGCAACATCGAGAAGAAGAAGAAGTGCCTCATCGAAT
TGGCCTCTCTGTTCTACAAATTCTTCCGTGGATCCAAATTCTCGGCCTGTAGATTCGGAAGCAAGATCGATGGAGAACACCAAGATTCTTCCAGCGAATCGGAAGTCGAA
GAAGAAGATTATCGCGATGGACGGGAATTTTTTTTTGACGGATCTGAAACAGAGAAGAAATTTCGGGAAAACGAGAAGATCTTAAGCCAATCGAAATTTCCTGTATCAAT
CTTAGACGTATTTAGCAAGAAGAATGCGATGGATTTCAATCTCAGTTTCATTAAGAGCAGAATCTGTAAGGGGAAAAATGGGAACAGAAATAGAAATCCTGATTACGACC
GGAATCTTAGAGAAAATGAATCGGCTACCCGATTAAGCCGAGAAAATCCTAAGCAAGAACGGAAAAATTCAACGGCAATCTCATACCATGAAGATGATGAAAACAGAGAA
CGATTATGGCAGAAAAGAATTCTAATGGGAGAGAGATGCAAACCTGTAATGAATACTTCTAAAAGTCTTCAATACGATCGCCATAGATCCTTCCTCCATGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCGGTTCCCTGCAAAAGAAGAGAACACAATTTTTTGAAGAAGAAACTCAAGCTACATCCATGGCTTTCATCACCACTCCTTCCGTTTCTTCCTTCAAGATCCC
ATCGTTCTTTCTCAACACCTTCCGAAAAAGATTCGATTACTGCAACACTAACATCGACGGAAAAGAAATTTCGAGCAACATCGAGAAGAAGAAGAAGTGCCTCATCGAAT
TGGCCTCTCTGTTCTACAAATTCTTCCGTGGATCCAAATTCTCGGCCTGTAGATTCGGAAGCAAGATCGATGGAGAACACCAAGATTCTTCCAGCGAATCGGAAGTCGAA
GAAGAAGATTATCGCGATGGACGGGAATTTTTTTTTGACGGATCTGAAACAGAGAAGAAATTTCGGGAAAACGAGAAGATCTTAAGCCAATCGAAATTTCCTGTATCAAT
CTTAGACGTATTTAGCAAGAAGAATGCGATGGATTTCAATCTCAGTTTCATTAAGAGCAGAATCTGTAAGGGGAAAAATGGGAACAGAAATAGAAATCCTGATTACGACC
GGAATCTTAGAGAAAATGAATCGGCTACCCGATTAAGCCGAGAAAATCCTAAGCAAGAACGGAAAAATTCAACGGCAATCTCATACCATGAAGATGATGAAAACAGAGAA
CGATTATGGCAGAAAAGAATTCTAATGGGAGAGAGATGCAAACCTGTAATGAATACTTCTAAAAGTCTTCAATACGATCGCCATAGATCCTTCCTCCATGGATGA
Protein sequenceShow/hide protein sequence
MEIGSLQKKRTQFFEEETQATSMAFITTPSVSSFKIPSFFLNTFRKRFDYCNTNIDGKEISSNIEKKKKCLIELASLFYKFFRGSKFSACRFGSKIDGEHQDSSSESEVE
EEDYRDGREFFFDGSETEKKFRENEKILSQSKFPVSILDVFSKKNAMDFNLSFIKSRICKGKNGNRNRNPDYDRNLRENESATRLSRENPKQERKNSTAISYHEDDENRE
RLWQKRILMGERCKPVMNTSKSLQYDRHRSFLHG