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HG10003797 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003797
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description40S ribosomal protein S15-4
Genome locationChr08:9162889..9166766
RNA-Seq ExpressionHG10003797
SyntenyHG10003797
Gene Ontology termsGO:0005840 - ribosome (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031317.1 uncharacterized protein E6C27_scaffold139G00700 [Cucumis melo var. makuwa]6.0e-1159.46Show/hide
Query:  LSVVPIVALEEEMSSEYFKYFVELQKKKLDEGECVVKRLDEGECVVKNDKNIGRISSLQKDIEDLKKQHKEDFE
        LSVVPIVA EEEM SEYF+YF+EL+  KLDE  C +K  +  E          RISSL +DI+DLKKQHKED E
Subjt:  LSVVPIVALEEEMSSEYFKYFVELQKKKLDEGECVVKRLDEGECVVKNDKNIGRISSLQKDIEDLKKQHKEDFE

KAE8651836.1 hypothetical protein Csa_006724 [Cucumis sativus]3.0e-1062.67Show/hide
Query:  LSVVPIVALEEEMSSEYFKYFVELQKKKLDEGECVVKRLDEGECVVKNDKNI-GRISSLQKDIEDLKKQHKEDFE
        LSVVPIVA +EEMSSEYF+YFVEL+  +L E           E  V NDKNI  RISSL +DIEDLKKQHKED +
Subjt:  LSVVPIVALEEEMSSEYFKYFVELQKKKLDEGECVVKRLDEGECVVKNDKNI-GRISSLQKDIEDLKKQHKEDFE

TYK08201.1 40S ribosomal protein S15-4 [Cucumis melo var. makuwa]6.0e-1159.46Show/hide
Query:  LSVVPIVALEEEMSSEYFKYFVELQKKKLDEGECVVKRLDEGECVVKNDKNIGRISSLQKDIEDLKKQHKEDFE
        LSVVPIVA EEEM SEYF+YF+EL+  KLDE  C +K  +  E          RISSL +DI+DLKKQHKED E
Subjt:  LSVVPIVALEEEMSSEYFKYFVELQKKKLDEGECVVKRLDEGECVVKNDKNIGRISSLQKDIEDLKKQHKEDFE

TYK09512.1 hypothetical protein E5676_scaffold994G00040 [Cucumis melo var. makuwa]3.5e-1158.44Show/hide
Query:  KVKLSVVPIVALEEEMSSEYFKYFVELQKKKLDEGECVVKRLDEGECVVKNDKNIGRISSLQKDIEDLKKQHKEDFE
        K  LSVVPIVA EEEM SEYF+YF+EL+  KLDE  C +K  +  E          RISSL +DI+DLKKQHKED E
Subjt:  KVKLSVVPIVALEEEMSSEYFKYFVELQKKKLDEGECVVKRLDEGECVVKNDKNIGRISSLQKDIEDLKKQHKEDFE

TYK22453.1 uncharacterized protein E5676_scaffold3009G00010 [Cucumis melo var. makuwa]6.0e-1159.46Show/hide
Query:  LSVVPIVALEEEMSSEYFKYFVELQKKKLDEGECVVKRLDEGECVVKNDKNIGRISSLQKDIEDLKKQHKEDFE
        LSVVPIVA EEEM SEYF+YF+EL+  KLDE  C +K  +  E          RISSL +DI+DLKKQHKED E
Subjt:  LSVVPIVALEEEMSSEYFKYFVELQKKKLDEGECVVKRLDEGECVVKNDKNIGRISSLQKDIEDLKKQHKEDFE

TrEMBL top hitse value%identityAlignment
A0A5A7VE89 Protein Ycf2-like2.5e-1058.33Show/hide
Query:  LSVVPIVALEEEMSSEYFKYFVELQKKKLDEGECVVKRLDEGECVVKNDKNIGRISSLQKDIEDLKKQHKED
        LSVVPIVA EEEM SEYF+YF+EL+  +LDE  C +K  +  E          RISSL +DI+DLKKQHKED
Subjt:  LSVVPIVALEEEMSSEYFKYFVELQKKKLDEGECVVKRLDEGECVVKNDKNIGRISSLQKDIEDLKKQHKED

A0A5A7VIA9 Uncharacterized protein2.9e-1159.46Show/hide
Query:  LSVVPIVALEEEMSSEYFKYFVELQKKKLDEGECVVKRLDEGECVVKNDKNIGRISSLQKDIEDLKKQHKEDFE
        LSVVPIVA EEEM SEYF+YF+EL+  KLDE  C +K  +  E          RISSL +DI+DLKKQHKED E
Subjt:  LSVVPIVALEEEMSSEYFKYFVELQKKKLDEGECVVKRLDEGECVVKNDKNIGRISSLQKDIEDLKKQHKEDFE

A0A5D3C8N2 40S ribosomal protein S15-42.9e-1159.46Show/hide
Query:  LSVVPIVALEEEMSSEYFKYFVELQKKKLDEGECVVKRLDEGECVVKNDKNIGRISSLQKDIEDLKKQHKEDFE
        LSVVPIVA EEEM SEYF+YF+EL+  KLDE  C +K  +  E          RISSL +DI+DLKKQHKED E
Subjt:  LSVVPIVALEEEMSSEYFKYFVELQKKKLDEGECVVKRLDEGECVVKNDKNIGRISSLQKDIEDLKKQHKEDFE

A0A5D3CE15 Uncharacterized protein1.7e-1158.44Show/hide
Query:  KVKLSVVPIVALEEEMSSEYFKYFVELQKKKLDEGECVVKRLDEGECVVKNDKNIGRISSLQKDIEDLKKQHKEDFE
        K  LSVVPIVA EEEM SEYF+YF+EL+  KLDE  C +K  +  E          RISSL +DI+DLKKQHKED E
Subjt:  KVKLSVVPIVALEEEMSSEYFKYFVELQKKKLDEGECVVKRLDEGECVVKNDKNIGRISSLQKDIEDLKKQHKEDFE

A0A5D3DFX6 Uncharacterized protein2.9e-1159.46Show/hide
Query:  LSVVPIVALEEEMSSEYFKYFVELQKKKLDEGECVVKRLDEGECVVKNDKNIGRISSLQKDIEDLKKQHKEDFE
        LSVVPIVA EEEM SEYF+YF+EL+  KLDE  C +K  +  E          RISSL +DI+DLKKQHKED E
Subjt:  LSVVPIVALEEEMSSEYFKYFVELQKKKLDEGECVVKRLDEGECVVKNDKNIGRISSLQKDIEDLKKQHKEDFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGCAACAGAAAAAGAACTCTGATCAAAGGTGAAGCATCAAGAAACAGAAGAAAATCAGAAAAGCCTAAAGTAAAGCTCTCTGTAGTTCCTATTGTTGCATTAGA
AGAAGAAATGTCATCTGAGTATTTCAAATATTTTGTGGAGTTACAGAAGAAAAAATTGGATGAAGGAGAATGTGTTGTGAAAAGATTGGATGAAGGAGAATGTGTTGTGA
AAAATGATAAAAATATTGGAAGAATATCTTCTTTACAAAAAGATATTGAAGATTTAAAAAAGCAACACAAGGAAGATTTTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGCAACAGAAAAAGAACTCTGATCAAAGGTGAAGCATCAAGAAACAGAAGAAAATCAGAAAAGCCTAAAGTAAAGCTCTCTGTAGTTCCTATTGTTGCATTAGA
AGAAGAAATGTCATCTGAGTATTTCAAATATTTTGTGGAGTTACAGAAGAAAAAATTGGATGAAGGAGAATGTGTTGTGAAAAGATTGGATGAAGGAGAATGTGTTGTGA
AAAATGATAAAAATATTGGAAGAATATCTTCTTTACAAAAAGATATTGAAGATTTAAAAAAGCAACACAAGGAAGATTTTGAATGA
Protein sequenceShow/hide protein sequence
MQSNRKRTLIKGEASRNRRKSEKPKVKLSVVPIVALEEEMSSEYFKYFVELQKKKLDEGECVVKRLDEGECVVKNDKNIGRISSLQKDIEDLKKQHKEDFE