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HG10003810 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003810
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTransposase, MuDR, plant
Genome locationChr08:9519498..9520942
RNA-Seq ExpressionHG10003810
SyntenyHG10003810
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO58802.1 Transposase, MuDR, plant [Corchorus capsularis]5.4e-0529.36Show/hide
Query:  DNINLIFHFNGQLV-VVDNYQYVGGIEITKVVDRDMLSIVELNALMSEVNVFNIECYWYLKPGFELHRGLCLISHDSDILSMVGDSSQQPQISGATSIQD
        D   + FH+ G  V   + ++Y GG       D D +S+ +LN +  +    N+   WYL+PGF LH+G   I++DS +L M  +   +        + +
Subjt:  DNINLIFHFNGQLV-VVDNYQYVGGIEITKVVDRDMLSIVELNALMSEVNVFNIECYWYLKPGFELHRGLCLISHDSDILSMVGDSSQQPQISGATSIQD

Query:  PKMPQLPGL
           PQ+PG+
Subjt:  PKMPQLPGL

XP_040257983.1 uncharacterized protein LOC120975471 [Aegilops tauschii subsp. strangulata]6.0e-0437.93Show/hide
Query:  MDNINLIFHFNGQLVVVDNY-QYVGGIEITKVVDRDMLSIVELNALMSE--VNVFNIEC--YWYLKPGFELHRGLCLISHDSDILSM
        +D I+++FH+NG+ V   N+  Y+GG E    +DRD LS+ EL   + +   +V  I+C  YW L PG E++ GL  +  D+ +L M
Subjt:  MDNINLIFHFNGQLVVVDNY-QYVGGIEITKVVDRDMLSIVELNALMSE--VNVFNIEC--YWYLKPGFELHRGLCLISHDSDILSM

TrEMBL top hitse value%identityAlignment
A0A1R3GL45 Transposase, MuDR, plant2.6e-0529.36Show/hide
Query:  DNINLIFHFNGQLV-VVDNYQYVGGIEITKVVDRDMLSIVELNALMSEVNVFNIECYWYLKPGFELHRGLCLISHDSDILSMVGDSSQQPQISGATSIQD
        D   + FH+ G  V   + ++Y GG       D D +S+ +LN +  +    N+   WYL+PGF LH+G   I++DS +L M  +   +        + +
Subjt:  DNINLIFHFNGQLV-VVDNYQYVGGIEITKVVDRDMLSIVELNALMSEVNVFNIECYWYLKPGFELHRGLCLISHDSDILSMVGDSSQQPQISGATSIQD

Query:  PKMPQLPGL
           PQ+PG+
Subjt:  PKMPQLPGL

A0A1R3JV32 Uncharacterized protein6.5e-0430.43Show/hide
Query:  DNINLIFHFNGQLV-VVDNYQYVGGIEITKVVDRDMLSIVELNALMSEVNVFNIECYWYLKPGFELHRGLCLISHDSDILSMVGDSSQQPQI
        D   + FH+ G  V   + ++Y GG       D D +S  +LN +  +    N+    YL+PGF LH+G+  I++D  +L MV D  +   +
Subjt:  DNINLIFHFNGQLV-VVDNYQYVGGIEITKVVDRDMLSIVELNALMSEVNVFNIECYWYLKPGFELHRGLCLISHDSDILSMVGDSSQQPQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAACATTAATCTCATATTCCATTTCAATGGTCAACTTGTTGTAGTTGATAATTATCAATATGTTGGAGGGATTGAGATTACTAAGGTTGTTGATAGGGACATGTT
ATCTATCGTTGAGTTAAATGCATTAATGTCAGAAGTAAATGTATTTAATATTGAATGTTATTGGTATTTGAAGCCTGGTTTCGAACTACATCGCGGTTTATGTTTAATTA
GTCATGATAGTGATATTTTAAGTATGGTTGGAGATTCTTCACAGCAACCTCAAATTTCTGGAGCTACATCAATACAAGACCCAAAAATGCCTCAACTTCCTGGATTAACC
ACACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAACATTAATCTCATATTCCATTTCAATGGTCAACTTGTTGTAGTTGATAATTATCAATATGTTGGAGGGATTGAGATTACTAAGGTTGTTGATAGGGACATGTT
ATCTATCGTTGAGTTAAATGCATTAATGTCAGAAGTAAATGTATTTAATATTGAATGTTATTGGTATTTGAAGCCTGGTTTCGAACTACATCGCGGTTTATGTTTAATTA
GTCATGATAGTGATATTTTAAGTATGGTTGGAGATTCTTCACAGCAACCTCAAATTTCTGGAGCTACATCAATACAAGACCCAAAAATGCCTCAACTTCCTGGATTAACC
ACACAATGA
Protein sequenceShow/hide protein sequence
MDNINLIFHFNGQLVVVDNYQYVGGIEITKVVDRDMLSIVELNALMSEVNVFNIECYWYLKPGFELHRGLCLISHDSDILSMVGDSSQQPQISGATSIQDPKMPQLPGLT
TQ