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HG10003833 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003833
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr08:9963397..9967006
RNA-Seq ExpressionHG10003833
SyntenyHG10003833
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140887.1 uncharacterized protein LOC101204847 isoform X2 [Cucumis sativus]6.3e-2059.5Show/hide
Query:  WFSGVYNGLLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLRYDTVSSITCVLKFHLDGIVALYQCVHSVY
        W + ++  L   VRA GAVGYVL+SSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTL +     + C     L         +H +Y
Subjt:  WFSGVYNGLLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLRYDTVSSITCVLKFHLDGIVALYQCVHSVY

Query:  SATTLLPSGVKTSFWLPFDLE
        S   L   G+KTS  LP  LE
Subjt:  SATTLLPSGVKTSFWLPFDLE
XP_011656560.1 uncharacterized protein LOC101204847 isoform X1 [Cucumis sativus]6.3e-2059.5Show/hide
Query:  WFSGVYNGLLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLRYDTVSSITCVLKFHLDGIVALYQCVHSVY
        W + ++  L   VRA GAVGYVL+SSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTL +     + C     L         +H +Y
Subjt:  WFSGVYNGLLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLRYDTVSSITCVLKFHLDGIVALYQCVHSVY

Query:  SATTLLPSGVKTSFWLPFDLE
        S   L   G+KTS  LP  LE
Subjt:  SATTLLPSGVKTSFWLPFDLE
XP_016900136.1 PREDICTED: uncharacterized protein LOC103488678 isoform X5 [Cucumis melo]1.1e-1958.68Show/hide
Query:  WFSGVYNGLLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLRYDTVSSITCVLKFHLDGIVALYQCVHSVY
        W + ++  L   VRA GAVGYVL+SSFLIRENIL+LITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTL +     + C     L         +H +Y
Subjt:  WFSGVYNGLLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLRYDTVSSITCVLKFHLDGIVALYQCVHSVY

Query:  SATTLLPSGVKTSFWLPFDLE
        S   L   G+KTS  LP  LE
Subjt:  SATTLLPSGVKTSFWLPFDLE
XP_016900140.1 PREDICTED: uncharacterized protein LOC103488678 isoform X6 [Cucumis melo]1.1e-1958.68Show/hide
Query:  WFSGVYNGLLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLRYDTVSSITCVLKFHLDGIVALYQCVHSVY
        W + ++  L   VRA GAVGYVL+SSFLIRENIL+LITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTL +     + C     L         +H +Y
Subjt:  WFSGVYNGLLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLRYDTVSSITCVLKFHLDGIVALYQCVHSVY

Query:  SATTLLPSGVKTSFWLPFDLE
        S   L   G+KTS  LP  LE
Subjt:  SATTLLPSGVKTSFWLPFDLE
XP_038885169.1 uncharacterized protein LOC120075651 [Benincasa hispida]8.3e-2059.5Show/hide
Query:  WFSGVYNGLLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLRYDTVSSITCVLKFHLDGIVALYQCVHSVY
        W + ++  L   VRALGAVGYVL+SSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFG L +     + C     L         +H +Y
Subjt:  WFSGVYNGLLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLRYDTVSSITCVLKFHLDGIVALYQCVHSVY

Query:  SATTLLPSGVKTSFWLPFDLE
        S   L   G+KTS  LP  LE
Subjt:  SATTLLPSGVKTSFWLPFDLE
TrEMBL top hitse value%identityAlignment
A0A0A0K8H0 Uncharacterized protein3.1e-2059.5Show/hide
Query:  WFSGVYNGLLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLRYDTVSSITCVLKFHLDGIVALYQCVHSVY
        W + ++  L   VRA GAVGYVL+SSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTL +     + C     L         +H +Y
Subjt:  WFSGVYNGLLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLRYDTVSSITCVLKFHLDGIVALYQCVHSVY

Query:  SATTLLPSGVKTSFWLPFDLE
        S   L   G+KTS  LP  LE
Subjt:  SATTLLPSGVKTSFWLPFDLE
A0A1S3BEA4 uncharacterized protein LOC103488678 isoform X21.2e-1961.68Show/hide
Query:  WFSGVYNGLLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLR-YDTVSSITCVLKFHLDGIVALYQC---V
        W + ++  L   VRA GAVGYVL+SSFLIRENIL+LITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTL  ++    IT V       I++   C   +
Subjt:  WFSGVYNGLLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLR-YDTVSSITCVLKFHLDGIVALYQC---V

Query:  HSVYSAT
         + YSAT
Subjt:  HSVYSAT
A0A1S4DVX7 uncharacterized protein LOC103488678 isoform X55.2e-2058.68Show/hide
Query:  WFSGVYNGLLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLRYDTVSSITCVLKFHLDGIVALYQCVHSVY
        W + ++  L   VRA GAVGYVL+SSFLIRENIL+LITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTL +     + C     L         +H +Y
Subjt:  WFSGVYNGLLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLRYDTVSSITCVLKFHLDGIVALYQCVHSVY

Query:  SATTLLPSGVKTSFWLPFDLE
        S   L   G+KTS  LP  LE
Subjt:  SATTLLPSGVKTSFWLPFDLE
A0A1S4DVY9 uncharacterized protein LOC103488678 isoform X11.2e-1961.68Show/hide
Query:  WFSGVYNGLLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLR-YDTVSSITCVLKFHLDGIVALYQC---V
        W + ++  L   VRA GAVGYVL+SSFLIRENIL+LITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTL  ++    IT V       I++   C   +
Subjt:  WFSGVYNGLLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLR-YDTVSSITCVLKFHLDGIVALYQC---V

Query:  HSVYSAT
         + YSAT
Subjt:  HSVYSAT
A0A1S4DWP5 uncharacterized protein LOC103488678 isoform X65.2e-2058.68Show/hide
Query:  WFSGVYNGLLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLRYDTVSSITCVLKFHLDGIVALYQCVHSVY
        W + ++  L   VRA GAVGYVL+SSFLIRENIL+LITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTL +     + C     L         +H +Y
Subjt:  WFSGVYNGLLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLRYDTVSSITCVLKFHLDGIVALYQCVHSVY

Query:  SATTLLPSGVKTSFWLPFDLE
        S   L   G+KTS  LP  LE
Subjt:  SATTLLPSGVKTSFWLPFDLE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26180.1 unknown protein2.4e-1748.15Show/hide
Query:  LLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLRYDTVSSITCVLKFHLDGIVALYQCVHSVYSATTLLPS
        L   VRALG +GYVL SSFLIRENILA+ITINIHASL+ +FTA G+N++PSM+ IY IFGT           VL  +    V L   ++S++     + S
Subjt:  LLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLRYDTVSSITCVLKFHLDGIVALYQCVHSVYSATTLLPS

Query:  GVKTSFWL
         ++   WL
Subjt:  GVKTSFWL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCTTGTGCAGCTAAGGCATGGTTTAGTGGGGTTTACAATGGGCTCCTTGTGGAGGTTCGAGCACTTGGGGCAGTGGGGTATGTCTTAATATCTTCATTCTTGAT
AAGAGAGAACATACTAGCTCTGATCACTATAAATATTCACGCTTCCCTCACCCTTATCTTCACTGCCTGGGGTGTGAACTTGATTCCATCAATGAATGCAATATATGCTA
TATTTGGGACACTGCGCTACGACACCGTGTCTTCTATCACATGCGTATTGAAGTTCCACCTTGATGGCATCGTGGCACTGTACCAATGTGTGCATTCTGTGTACAGTGCC
ACGACGCTCTTGCCTTCAGGGGTAAAAACATCATTTTGGCTTCCATTTGACCTAGAGTTAGGACTCCGAGTTGACTCGTTTAAGTTATGTTTTGTCCCTAATGTTGGATC
CTATCTCCAAATTGCTCGATGTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCCTTGTGCAGCTAAGGCATGGTTTAGTGGGGTTTACAATGGGCTCCTTGTGGAGGTTCGAGCACTTGGGGCAGTGGGGTATGTCTTAATATCTTCATTCTTGAT
AAGAGAGAACATACTAGCTCTGATCACTATAAATATTCACGCTTCCCTCACCCTTATCTTCACTGCCTGGGGTGTGAACTTGATTCCATCAATGAATGCAATATATGCTA
TATTTGGGACACTGCGCTACGACACCGTGTCTTCTATCACATGCGTATTGAAGTTCCACCTTGATGGCATCGTGGCACTGTACCAATGTGTGCATTCTGTGTACAGTGCC
ACGACGCTCTTGCCTTCAGGGGTAAAAACATCATTTTGGCTTCCATTTGACCTAGAGTTAGGACTCCGAGTTGACTCGTTTAAGTTATGTTTTGTCCCTAATGTTGGATC
CTATCTCCAAATTGCTCGATGTTTATAA
Protein sequenceShow/hide protein sequence
MLPCAAKAWFSGVYNGLLVEVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLRYDTVSSITCVLKFHLDGIVALYQCVHSVYSA
TTLLPSGVKTSFWLPFDLELGLRVDSFKLCFVPNVGSYLQIARCL