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HG10003857 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003857
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr08:10501641..10502135
RNA-Seq ExpressionHG10003857
SyntenyHG10003857
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038886174.1 uncharacterized protein LOC120076425 isoform X1 [Benincasa hispida]3.7e-3460.47Show/hide
Query:  MIGKKISKSGSKRGSSEMIENSNRVFGSEDSSNSSGSRKKKNKGVALNTTSDEFTIELPSTSMQTTQKNKGLMGLNTSSIETSLDSFASTQTSV-KPSSP
        MIGKK SK  SKRG SEMIENS  +FGSEDSSNS+ SRK+KNKGVALNT   E   E  ++ +QTT+K+KGL+GL+++ I TS DSF+  QT+V KPSSP
Subjt:  MIGKKISKSGSKRGSSEMIENSNRVFGSEDSSNSSGSRKKKNKGVALNTTSDEFTIELPSTSMQTTQKNKGLMGLNTSSIETSLDSFASTQTSV-KPSSP

Query:  NQTTQKNKAVGFNKTSPKPTGVKIPLSSKKTIQKNKVVPLNINPTPTNFDPK-------KRRYPTRSSGDKS
          TTQ       NK +PKPTGV   LSSK  IQ+NKVVPL  +PTPTNF P+        RRYPTRSS  KS
Subjt:  NQTTQKNKAVGFNKTSPKPTGVKIPLSSKKTIQKNKVVPLNINPTPTNFDPK-------KRRYPTRSSGDKS
XP_038886175.1 uncharacterized protein LOC120076425 isoform X2 [Benincasa hispida]3.7e-3460.47Show/hide
Query:  MIGKKISKSGSKRGSSEMIENSNRVFGSEDSSNSSGSRKKKNKGVALNTTSDEFTIELPSTSMQTTQKNKGLMGLNTSSIETSLDSFASTQTSV-KPSSP
        MIGKK SK  SKRG SEMIENS  +FGSEDSSNS+ SRK+KNKGVALNT   E   E  ++ +QTT+K+KGL+GL+++ I TS DSF+  QT+V KPSSP
Subjt:  MIGKKISKSGSKRGSSEMIENSNRVFGSEDSSNSSGSRKKKNKGVALNTTSDEFTIELPSTSMQTTQKNKGLMGLNTSSIETSLDSFASTQTSV-KPSSP

Query:  NQTTQKNKAVGFNKTSPKPTGVKIPLSSKKTIQKNKVVPLNINPTPTNFDPK-------KRRYPTRSSGDKS
          TTQ       NK +PKPTGV   LSSK  IQ+NKVVPL  +PTPTNF P+        RRYPTRSS  KS
Subjt:  NQTTQKNKAVGFNKTSPKPTGVKIPLSSKKTIQKNKVVPLNINPTPTNFDPK-------KRRYPTRSSGDKS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGAAAGAAAATATCTAAAAGTGGAAGCAAGCGAGGCAGTAGTGAAATGATAGAGAATTCAAATAGAGTTTTTGGATCAGAAGATTCATCCAATTCTTCAGGTAG
TAGAAAAAAGAAAAACAAAGGTGTGGCTTTGAACACAACCTCTGATGAATTCACCATTGAATTACCATCTACTTCCATGCAAACTACACAAAAGAATAAAGGCCTTATGG
GTTTGAACACAAGCTCTATTGAAACCAGCTTGGACTCATTTGCTTCTACACAAACCAGTGTTAAGCCATCAAGTCCTAATCAGACTACACAAAAGAATAAAGCTGTGGGT
TTCAACAAGACATCCCCTAAACCAACTGGTGTTAAAATCCCATTGAGTTCAAAGAAAACAATACAAAAGAACAAAGTCGTGCCTTTAAACATAAACCCTACTCCAACCAA
CTTTGATCCCAAAAAAAGGCGTTATCCAACTCGTAGTTCGGGTGACAAAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGGAAAGAAAATATCTAAAAGTGGAAGCAAGCGAGGCAGTAGTGAAATGATAGAGAATTCAAATAGAGTTTTTGGATCAGAAGATTCATCCAATTCTTCAGGTAG
TAGAAAAAAGAAAAACAAAGGTGTGGCTTTGAACACAACCTCTGATGAATTCACCATTGAATTACCATCTACTTCCATGCAAACTACACAAAAGAATAAAGGCCTTATGG
GTTTGAACACAAGCTCTATTGAAACCAGCTTGGACTCATTTGCTTCTACACAAACCAGTGTTAAGCCATCAAGTCCTAATCAGACTACACAAAAGAATAAAGCTGTGGGT
TTCAACAAGACATCCCCTAAACCAACTGGTGTTAAAATCCCATTGAGTTCAAAGAAAACAATACAAAAGAACAAAGTCGTGCCTTTAAACATAAACCCTACTCCAACCAA
CTTTGATCCCAAAAAAAGGCGTTATCCAACTCGTAGTTCGGGTGACAAAAGTTAA
Protein sequenceShow/hide protein sequence
MIGKKISKSGSKRGSSEMIENSNRVFGSEDSSNSSGSRKKKNKGVALNTTSDEFTIELPSTSMQTTQKNKGLMGLNTSSIETSLDSFASTQTSVKPSSPNQTTQKNKAVG
FNKTSPKPTGVKIPLSSKKTIQKNKVVPLNINPTPTNFDPKKRRYPTRSSGDKS