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HG10003858 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003858
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr08:10514335..10514829
RNA-Seq ExpressionHG10003858
SyntenyHG10003858
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038886174.1 uncharacterized protein LOC120076425 isoform X1 [Benincasa hispida]2.3e-2859.65Show/hide
Query:  MSGEQISKRQWSKRSISQMIETSSSVFGSEDSSNSSGSRKRKNKGVALNTSSNEFTIELPSTSI-QTTPKNK---GLKTSPIETSLDSFASTQTNV-KPS
        M G++ SKR WSKR  S+MIE S+++FGSEDSSNS+ SRKRKNKGVALNT+  E   E PSTSI QTT K+K   GL ++PI TS DSF+  QTNV KPS
Subjt:  MSGEQISKRQWSKRSISQMIETSSSVFGSEDSSNSSGSRKRKNKGVALNTSSNEFTIELPSTSI-QTTPKNK---GLKTSPIETSLDSFASTQTNV-KPS

Query:  SLNKTTQKNKGVHFNNTSPKPTGVKIPLSSKQTIQKNKAVPLNTNPTPTYFDQE-------KRRYPTRSSS
        S   TTQ NK       +PKPTGV   LSSK  IQ+NK VPL T+PTPT F  +        RRYPTRSSS
Subjt:  SLNKTTQKNKGVHFNNTSPKPTGVKIPLSSKQTIQKNKAVPLNTNPTPTYFDQE-------KRRYPTRSSS
XP_038886175.1 uncharacterized protein LOC120076425 isoform X2 [Benincasa hispida]2.3e-2859.65Show/hide
Query:  MSGEQISKRQWSKRSISQMIETSSSVFGSEDSSNSSGSRKRKNKGVALNTSSNEFTIELPSTSI-QTTPKNK---GLKTSPIETSLDSFASTQTNV-KPS
        M G++ SKR WSKR  S+MIE S+++FGSEDSSNS+ SRKRKNKGVALNT+  E   E PSTSI QTT K+K   GL ++PI TS DSF+  QTNV KPS
Subjt:  MSGEQISKRQWSKRSISQMIETSSSVFGSEDSSNSSGSRKRKNKGVALNTSSNEFTIELPSTSI-QTTPKNK---GLKTSPIETSLDSFASTQTNV-KPS

Query:  SLNKTTQKNKGVHFNNTSPKPTGVKIPLSSKQTIQKNKAVPLNTNPTPTYFDQE-------KRRYPTRSSS
        S   TTQ NK       +PKPTGV   LSSK  IQ+NK VPL T+PTPT F  +        RRYPTRSSS
Subjt:  SLNKTTQKNKGVHFNNTSPKPTGVKIPLSSKQTIQKNKAVPLNTNPTPTYFDQE-------KRRYPTRSSS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGAGAGCAAATATCAAAAAGGCAATGGAGCAAGCGAAGCATCAGTCAAATGATAGAGACTTCAAGTAGTGTTTTTGGATCAGAAGACTCATCCAATTCTTCAGG
TAGTAGAAAAAGGAAAAACAAAGGTGTGGCTTTGAACACAAGCTCTAATGAATTCACCATTGAATTACCATCTACTTCCATTCAAACTACACCAAAAAATAAAGGCTTGA
AGACAAGCCCTATTGAAACCAGCTTGGACTCATTTGCTTCAACACAAACCAATGTTAAGCCATCAAGTCTTAATAAGACTACACAAAAGAATAAAGGTGTTCATTTCAAC
AACACATCCCCTAAACCGACTGGTGTTAAAATCCCATTGAGTTCAAAGCAAACAATACAAAAGAACAAAGCTGTGCCTTTAAACACAAACCCTACTCCAACCTACTTTGA
TCAAGAAAAAAGGCGTTATCCAACTCGTAGTTCATCATCAAGCGACAAAAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGGAGAGCAAATATCAAAAAGGCAATGGAGCAAGCGAAGCATCAGTCAAATGATAGAGACTTCAAGTAGTGTTTTTGGATCAGAAGACTCATCCAATTCTTCAGG
TAGTAGAAAAAGGAAAAACAAAGGTGTGGCTTTGAACACAAGCTCTAATGAATTCACCATTGAATTACCATCTACTTCCATTCAAACTACACCAAAAAATAAAGGCTTGA
AGACAAGCCCTATTGAAACCAGCTTGGACTCATTTGCTTCAACACAAACCAATGTTAAGCCATCAAGTCTTAATAAGACTACACAAAAGAATAAAGGTGTTCATTTCAAC
AACACATCCCCTAAACCGACTGGTGTTAAAATCCCATTGAGTTCAAAGCAAACAATACAAAAGAACAAAGCTGTGCCTTTAAACACAAACCCTACTCCAACCTACTTTGA
TCAAGAAAAAAGGCGTTATCCAACTCGTAGTTCATCATCAAGCGACAAAAGCTAA
Protein sequenceShow/hide protein sequence
MSGEQISKRQWSKRSISQMIETSSSVFGSEDSSNSSGSRKRKNKGVALNTSSNEFTIELPSTSIQTTPKNKGLKTSPIETSLDSFASTQTNVKPSSLNKTTQKNKGVHFN
NTSPKPTGVKIPLSSKQTIQKNKAVPLNTNPTPTYFDQEKRRYPTRSSSSSDKS