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HG10003869 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003869
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 43
Genome locationChr08:10942119..10942415
RNA-Seq ExpressionHG10003869
SyntenyHG10003869
Gene Ontology termsNA
InterPro domainsIPR040274 - CLAVATA3/ESR (CLE)-related protein 27/43


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063931.1 putative Clavata3/esr-related 43 [Cucumis melo var. makuwa]1.7e-2371.11Show/hide
Query:  GATPTRRRRFLSSFFIMFFFIWVVFCHQNA-AVARPLPESQNPDQTDIGGAGAGSKEKVLWKYFNGRSLGSREFEENKRTVPSCPDPLHN
        GATP+RRRR LS FFI+ FFIWVV  +Q A A+ARPL ES+NPD         GSKE    KYFNGRSLGSREFEENKRTVPSCPDPLHN
Subjt:  GATPTRRRRFLSSFFIMFFFIWVVFCHQNA-AVARPLPESQNPDQTDIGGAGAGSKEKVLWKYFNGRSLGSREFEENKRTVPSCPDPLHN

KAG6579278.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]2.8e-2968.93Show/hide
Query:  MVAFPAMYGGAT--PTRRRRFLSSFFIMFFFIWVVFC---HQNAAVARPLPESQNPDQTDIGGAGAGSKEKVLWKYFNGRSLGSREFEENKRTVPSCPDP
        MV FPAM GG    P RRRRFLSSFF++ FFIWVVFC   HQ  AVARP P +Q P+Q+  G  GAGSKEK+L  YFNGRS GSR F+E KRTVPSCPDP
Subjt:  MVAFPAMYGGAT--PTRRRRFLSSFFIMFFFIWVVFC---HQNAAVARPLPESQNPDQTDIGGAGAGSKEKVLWKYFNGRSLGSREFEENKRTVPSCPDP

Query:  LHN
        LHN
Subjt:  LHN

KAG6601785.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2365.59Show/hide
Query:  MYGGATPTRRRRFLSSFFIMFFFIWVVFCHQNAAV-ARPLPESQNPDQTDIGGAGAGSKEKVLWKYFNGRSLGSREFEENKRTVPSCPDPLHN
        M GG TPTR+RRFLS+  +M  FIWVVFCHQ  AV AR  PE+  P++T +GG G GSKEK+L KYFN    G R FE+NKRTVPSCPDPLHN
Subjt:  MYGGATPTRRRRFLSSFFIMFFFIWVVFCHQNAAV-ARPLPESQNPDQTDIGGAGAGSKEKVLWKYFNGRSLGSREFEENKRTVPSCPDPLHN

KAG7016789.1 hypothetical protein SDJN02_21899, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-2771.28Show/hide
Query:  GGAT-PTRRRRFLSSFFIMFFFIWVVFC---HQNAAVARPLPESQNPDQTDIGGAGAGSKEKVLWKYFNGRSLGSREFEENKRTVPSCPDPLHN
        GGAT P RRRRFLSSFF++ FFIWVVFC   HQ  AVARP P +Q P+Q+  G  GAGSKEK+L  YFNGRS GSR F+E KRTVPSCPDPLHN
Subjt:  GGAT-PTRRRRFLSSFFIMFFFIWVVFC---HQNAAVARPLPESQNPDQTDIGGAGAGSKEKVLWKYFNGRSLGSREFEENKRTVPSCPDPLHN

KGN52083.1 hypothetical protein Csa_008231 [Cucumis sativus]1.6e-0538.04Show/hide
Query:  SSFFIMFFFIWV----VFCHQNAAVAR------PLPESQNPDQTDIGGAGAGSKEKVLWKYFNGRSLGSRE----FEENKRTVPSCPDPLHN
        S+F I+   +WV    V CH  A  +R      P P     D++  G     +K  +L KYFNGR+         FE++KR +PSCPDPLHN
Subjt:  SSFFIMFFFIWV----VFCHQNAAVAR------PLPESQNPDQTDIGGAGAGSKEKVLWKYFNGRSLGSRE----FEENKRTVPSCPDPLHN

TrEMBL top hitse value%identityAlignment
A0A061E6F8 Clavata3/esr-related 43, putative6.7e-0545.57Show/hide
Query:  IMFFFIWVVFCHQNAAVARPLPESQNPDQTDIGGAGAG-SKEKVLWKYFNGRSLG----SREFEENKRTVPSCPDPLHN
        I F  IWV  C   A   R LP +     T+  G      K  +  KYFNGRS       R FEE+KR VPSCPDPLHN
Subjt:  IMFFFIWVVFCHQNAAVARPLPESQNPDQTDIGGAGAG-SKEKVLWKYFNGRSLG----SREFEENKRTVPSCPDPLHN

A0A0A0KR66 Uncharacterized protein7.9e-0638.04Show/hide
Query:  SSFFIMFFFIWV----VFCHQNAAVAR------PLPESQNPDQTDIGGAGAGSKEKVLWKYFNGRSLGSRE----FEENKRTVPSCPDPLHN
        S+F I+   +WV    V CH  A  +R      P P     D++  G     +K  +L KYFNGR+         FE++KR +PSCPDPLHN
Subjt:  SSFFIMFFFIWV----VFCHQNAAVAR------PLPESQNPDQTDIGGAGAGSKEKVLWKYFNGRSLGSRE----FEENKRTVPSCPDPLHN

A0A2I4HTU3 CLAVATA3/ESR (CLE)-related protein 275.1e-0541.25Show/hide
Query:  IMFFFIWVVFCHQNAAVARPLPESQNPDQTDIGGAGAG------SKEKVLWKYFNGRSLGSREFEENKRTVPSCPDPLHN
        ++  ++W  +  Q  A+ R LP         +GG+  G      SKE ++ K+FNGR+     FEENKR VPSCPDPLHN
Subjt:  IMFFFIWVVFCHQNAAVARPLPESQNPDQTDIGGAGAG------SKEKVLWKYFNGRSLGSREFEENKRTVPSCPDPLHN

A0A2J6LV71 Uncharacterized protein8.8e-0538.3Show/hide
Query:  PTRRRRFLSSFFIMF--FFIWVV---FCHQNAAVARPLPESQNPDQTDIGGAGAGSKEKVLWKYFNGR---SLGSREFEENKRTVPSCPDPLHN
        P RRR +L   FI+F    IW++    C   +    P P    PD      + A  + ++  K+FNGR       + F+ENKR VPSCPDPLHN
Subjt:  PTRRRRFLSSFFIMF--FFIWVV---FCHQNAAVARPLPESQNPDQTDIGGAGAGSKEKVLWKYFNGR---SLGSREFEENKRTVPSCPDPLHN

A0A5A7VDX3 Putative Clavata3/esr-related 438.4e-2471.11Show/hide
Query:  GATPTRRRRFLSSFFIMFFFIWVVFCHQNA-AVARPLPESQNPDQTDIGGAGAGSKEKVLWKYFNGRSLGSREFEENKRTVPSCPDPLHN
        GATP+RRRR LS FFI+ FFIWVV  +Q A A+ARPL ES+NPD         GSKE    KYFNGRSLGSREFEENKRTVPSCPDPLHN
Subjt:  GATPTRRRRFLSSFFIMFFFIWVVFCHQNA-AVARPLPESQNPDQTDIGGAGAGSKEKVLWKYFNGRSLGSREFEENKRTVPSCPDPLHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCTTTTCCAGCAATGTACGGCGGCGCCACTCCCACACGGCGGCGGCGATTTCTCTCTTCTTTCTTCATTATGTTTTTCTTTATCTGGGTCGTCTTCTGC
CACCAAAACGCTGCCGTCGCAAGACCGTTACCGGAAAGTCAAAATCCAGATCAAACCGATATCGGAGGTGCCGGCGCCGGAAGCAAGGAGAAGGTTCTGTGGAAG
TATTTCAATGGAAGGAGTTTGGGTTCGAGAGAGTTTGAAGAGAACAAACGAACAGTCCCCAGCTGTCCTGATCCTCTGCATAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGCTTTTCCAGCAATGTACGGCGGCGCCACTCCCACACGGCGGCGGCGATTTCTCTCTTCTTTCTTCATTATGTTTTTCTTTATCTGGGTCGTCTTCTGC
CACCAAAACGCTGCCGTCGCAAGACCGTTACCGGAAAGTCAAAATCCAGATCAAACCGATATCGGAGGTGCCGGCGCCGGAAGCAAGGAGAAGGTTCTGTGGAAG
TATTTCAATGGAAGGAGTTTGGGTTCGAGAGAGTTTGAAGAGAACAAACGAACAGTCCCCAGCTGTCCTGATCCTCTGCATAACTAG
Protein sequenceShow/hide protein sequence
MVAFPAMYGGATPTRRRRFLSSFFIMFFFIWVVFCHQNAAVARPLPESQNPDQTDIGGAGAGSKEKVLWKYFNGRSLGSREFEENKRTVPSCPDPLHN