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HG10003871 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003871
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionselenoprotein K
Genome locationChr08:10984974..10987501
RNA-Seq ExpressionHG10003871
SyntenyHG10003871
Gene Ontology termsGO:0006816 - calcium ion transport (biological process)
GO:0032469 - endoplasmic reticulum calcium ion homeostasis (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR024491 - Selenoprotein SelK/SelG


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646613.1 hypothetical protein Csa_005613 [Cucumis sativus]1.2e-4688.79Show/hide
Query:  FWIKKYSRFCSPGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLP
        F+++    +   GVVKSQRSFWRLKTITDFFWAI+NVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLP
Subjt:  FWIKKYSRFCSPGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLP

Query:  ACGSCCG
        ACGSCCG
Subjt:  ACGSCCG

XP_004140863.1 selenoprotein K isoform X1 [Cucumis sativus]1.2e-4698.95Show/hide
Query:  GVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
        GVVKSQRSFWRLKTITDFFWAI+NVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Subjt:  GVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG

XP_008445670.1 PREDICTED: selenoprotein K [Cucumis melo]1.2e-4698.95Show/hide
Query:  GVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
        GVVKSQRSFWRLKTITDFFWAIIN+IGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Subjt:  GVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG

XP_022964558.1 selenoprotein K-like [Cucurbita moschata]1.5e-4697.89Show/hide
Query:  GVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
        GVVKSQRSFWRLKTITDFFWAI+N+IGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Subjt:  GVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG

XP_031743925.1 selenoprotein K isoform X2 [Cucumis sativus]1.2e-4698.95Show/hide
Query:  GVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
        GVVKSQRSFWRLKTITDFFWAI+NVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Subjt:  GVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG

TrEMBL top hitse value%identityAlignment
A0A0A0KDW6 Uncharacterized protein5.7e-4798.95Show/hide
Query:  GVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
        GVVKSQRSFWRLKTITDFFWAI+NVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Subjt:  GVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG

A0A1S3BE45 selenoprotein K5.7e-4798.95Show/hide
Query:  GVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
        GVVKSQRSFWRLKTITDFFWAIIN+IGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Subjt:  GVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG

A0A6J1HI52 selenoprotein K-like7.4e-4797.89Show/hide
Query:  GVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
        GVVKSQRSFWRLKTITDFFWAI+N+IGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Subjt:  GVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG

A0A6J1JQF6 selenoprotein K7.4e-4797.89Show/hide
Query:  GVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
        GVVKSQRSFWRLKTITDFFWAI+N+IGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Subjt:  GVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG

A0A6J1JVZ4 selenoprotein K-like3.7e-4696.84Show/hide
Query:  GVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
        GVVKSQRSFWRLKTITDFFWAI+N+IGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPR LDNVRGIDHSSLPACGSCCG
Subjt:  GVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G08230.1 glycine-rich protein2.9e-2763.55Show/hide
Query:  GVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKW-----DGGGPGGPGSGPYGGRPRGPPR-GLDNVRGI------DHSSLP
        GVVK++R  WRL+TI DFF +IIN+I VFF T+FSMEKS+AYRKGS   KKW      GGG GG   G  GGR  GPPR GLDNVRG+      DH+SLP
Subjt:  GVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKW-----DGGGPGGPGSGPYGGRPRGPPR-GLDNVRGI------DHSSLP

Query:  ACGSCCG
        ACGSCCG
Subjt:  ACGSCCG

AT4G08230.2 glycine-rich protein3.1e-1362.5Show/hide
Query:  MEKSEAYRKGSGSGKKW-----DGGGPGGPGSGPYGGRPRGPPR-GLDNVRGI------DHSSLPACGSCCG
        MEKS+AYRKGS   KKW      GGG GG   G  GGR  GPPR GLDNVRG+      DH+SLPACGSCCG
Subjt:  MEKSEAYRKGSGSGKKW-----DGGGPGGPGSGPYGGRPRGPPR-GLDNVRGI------DHSSLPACGSCCG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTACGTTGAACGAGGTTCTCTCTCAATCTCTAATCACTTCTATTTCGATTTCACTGCTGAGAGATTGGTTGATCGCTTTTGGATTAAGAAATATTCTAGATTTTG
TTCCCCTGGTGTAGTGAAATCCCAGAGATCATTTTGGCGTCTCAAAACTATAACTGATTTCTTTTGGGCCATCATAAACGTTATCGGTGTGTTTTTTACCACCTTGTTCT
CGATGGAAAAATCAGAGGCATATAGAAAAGGATCCGGTTCTGGGAAGAAATGGGACGGTGGTGGCCCTGGAGGACCTGGGTCGGGGCCCTATGGTGGCCGTCCCCGTGGT
CCACCTCGTGGTCTAGACAATGTTCGAGGGATCGATCACAGTTCATTACCTGCCTGTGGCTCGTGCTGTGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTACGTTGAACGAGGTTCTCTCTCAATCTCTAATCACTTCTATTTCGATTTCACTGCTGAGAGATTGGTTGATCGCTTTTGGATTAAGAAATATTCTAGATTTTG
TTCCCCTGGTGTAGTGAAATCCCAGAGATCATTTTGGCGTCTCAAAACTATAACTGATTTCTTTTGGGCCATCATAAACGTTATCGGTGTGTTTTTTACCACCTTGTTCT
CGATGGAAAAATCAGAGGCATATAGAAAAGGATCCGGTTCTGGGAAGAAATGGGACGGTGGTGGCCCTGGAGGACCTGGGTCGGGGCCCTATGGTGGCCGTCCCCGTGGT
CCACCTCGTGGTCTAGACAATGTTCGAGGGATCGATCACAGTTCATTACCTGCCTGTGGCTCGTGCTGTGGCTAA
Protein sequenceShow/hide protein sequence
MAYVERGSLSISNHFYFDFTAERLVDRFWIKKYSRFCSPGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRG
PPRGLDNVRGIDHSSLPACGSCCG