CuGenDBv2

Gene ID	HG10003896
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	zinc_ribbon_15 domain-containing protein
Genome location	Chr08:11323920..11324258
RNA-Seq Expression	HG10003896
Synteny	HG10003896
Gene Ontology terms	NA
InterPro domains	IPR031493 - Zinc-ribbon 15

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6578964.1 hypothetical protein SDJN03_23412, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-56

89.29

Show/hide

Query:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEP
        MFFFFVGGLEQQVRQLLKSGAGRC+NCNSPADLV+YEKVLKLFFVPVWRWPGKEPLMHCNNC LFFPQSFSPPPISDQS P A L R  RCRSCNK+VEP
Subjt:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEP

Query:  DFSFCPYCGSSL
        +FSFCP+CGSSL
Subjt:  DFSFCPYCGSSL

KAG7016486.1 hypothetical protein SDJN02_21595, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-56

90.18

Show/hide

Query:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEP
        MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLV+YEKVLKLFFVPVWRWPGKEPLMHCNNC LFFPQSFSPPPISDQS P A L R  RCRSCNK+VEP
Subjt:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEP

Query:  DFSFCPYCGSSL
        +FSFCP+CGSSL
Subjt:  DFSFCPYCGSSL

XP_022962458.1 uncharacterized protein LOC111462885 [Cucurbita moschata]

3.2e-58

91.96

Show/hide

Query:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEP
        MFFFFVGGLEQQVR LLK+GAGRCI+CNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFP+SFSPPPISDQ PPSAALLRA RC SCNK+VEP
Subjt:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEP

Query:  DFSFCPYCGSSL
        DFSFCP+CGSSL
Subjt:  DFSFCPYCGSSL

XP_023541925.1 uncharacterized protein LOC111801919 [Cucurbita pepo subsp. pepo]

7.2e-58

91.07

Show/hide

Query:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEP
        MFFFFVGGLEQQVR LLK+GAGRCI+CNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFP+SFSPPPISDQ PPSAALLRA RC SCNK+VEP
Subjt:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEP

Query:  DFSFCPYCGSSL
        DFSFCP+CGSS+
Subjt:  DFSFCPYCGSSL

XP_038884584.1 uncharacterized protein LOC120075351 [Benincasa hispida]

2.5e-58

91.96

Show/hide

Query:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEP
        MFFFFVGGL+QQVRQ++KS AGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQS PSAALLRA  CRSCN++VEP
Subjt:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEP

Query:  DFSFCPYCGSSL
        DFSFCPYCGSSL
Subjt:  DFSFCPYCGSSL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KDD6 zinc_ribbon_15 domain-containing protein

2.1e-55

91.07

Show/hide

Query:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEP
        MFFFFVGGLEQQVR+LLKSGA RCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQS SPP  SDQS  SA LLRA RCRSCNK+VEP
Subjt:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEP

Query:  DFSFCPYCGSSL
        DFSFCPYCGSSL
Subjt:  DFSFCPYCGSSL

A0A1S3CRV3 uncharacterized protein LOC103504060

2.1e-55

91.07

Show/hide

Query:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEP
        MFFFFVGGLEQQVRQLLKSGA RCINC+SPADLV+YEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQS SPP  SDQS PSAAL RA RCRSCNK+VEP
Subjt:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEP

Query:  DFSFCPYCGSSL
        DFSFCPYCGSSL
Subjt:  DFSFCPYCGSSL

A0A5A7V2D0 zinc_ribbon_15 domain-containing protein

2.1e-55

91.07

Show/hide

Query:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEP
        MFFFFVGGLEQQVRQLLKSGA RCINC+SPADLV+YEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQS SPP  SDQS PSAAL RA RCRSCNK+VEP
Subjt:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEP

Query:  DFSFCPYCGSSL
        DFSFCPYCGSSL
Subjt:  DFSFCPYCGSSL

A0A6J1HEV4 uncharacterized protein LOC111462885

1.6e-58

91.96

Show/hide

Query:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEP
        MFFFFVGGLEQQVR LLK+GAGRCI+CNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFP+SFSPPPISDQ PPSAALLRA RC SCNK+VEP
Subjt:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEP

Query:  DFSFCPYCGSSL
        DFSFCP+CGSSL
Subjt:  DFSFCPYCGSSL

A0A6J1JRI4 uncharacterized protein LOC111489157

4.3e-56

89.29

Show/hide

Query:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEP
        MFFFFVGGLEQQVRQLLKS AGRCINCNSPADLV+YEKVLKLFFVPVWRWPGKEPLMHCNNC LFFP+SFSPPPISDQS P AAL R  RCRSCNK+VEP
Subjt:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEP

Query:  DFSFCPYCGSSL
        DFSFCP+CG SL
Subjt:  DFSFCPYCGSSL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G44414.1 unknown protein

1.1e-43

66.96

Show/hide

Query:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEP
        MFFFFVGGL QQVRQ+LKSGAG CI C S ADLV+Y+KV+KLFFVPVWRWPGK+PL+HC +C LFFPQS SPPP+S              CR C+++VEP
Subjt:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEP

Query:  DFSFCPYCGSSL
        +F FCP+CGSSL
Subjt:  DFSFCPYCGSSL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTCTTCTTCTTCGTCGGAGGCTTAGAGCAACAAGTTCGCCAACTCCTCAAATCCGGCGCCGGCCGATGTATAAACTGCAACTCCCCGGCCGATCTCGTTGACTACGA
GAAAGTTCTGAAGCTCTTCTTTGTTCCGGTGTGGCGGTGGCCGGGAAAAGAGCCATTGATGCACTGCAATAACTGTAAGCTCTTTTTCCCTCAGTCGTTTTCTCCGCCGC
CAATTTCCGATCAATCGCCGCCATCAGCCGCTCTTTTAAGAGCCTTTCGGTGCCGTTCTTGCAACAAAATTGTGGAGCCCGACTTCAGCTTCTGCCCTTACTGTGGCTCT
TCTCTGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSFSPPPISDQSPPSAALLRAFRCRSCNKIVEPDFSFCPYCGS
SL

HG10003896 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome