; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003897 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003897
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr08:11339434..11340330
RNA-Seq ExpressionHG10003897
SyntenyHG10003897
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG54012.1 hypothetical protein EZV62_019268 [Acer yangbiense]7.9e-3536.6Show/hide
Query:  NLKLTEPEQAMAILEDDQINEVENKLQNALVCKILTSKIVNVEAFRITMPKIWNLQEEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFFDNGPLLFQHP
        +L + E +  + ILE+    E  N+L   L  KIL++K VN EAF   + KIW ++E   I++V  NI+   FK  +D+Q V+  GPW FDN  L+    
Subjt:  NLKLTEPEQAMAILEDDQINEVENKLQNALVCKILTSKIVNVEAFRITMPKIWNLQEEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFFDNGPLLFQHP

Query:  PRGTCKFIDIDFKYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIPITYEKLMGFC
        P G      I F  A FWV  HQ+PI C +RK+    G L+G    V+  + G   G+ MRVRV+I + +PL+R ++L +   G E+L+ + YE+L   C
Subjt:  PRGTCKFIDIDFKYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIPITYEKLMGFC

Query:  FECGKLGH----------------VDDLQYGDWPR
        F+CG + H                V+DL +G W R
Subjt:  FECGKLGH----------------VDDLQYGDWPR

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.3e-3434.58Show/hide
Query:  IFTQWENLKLTEPEQAMAILEDDQINEVENK-LQNALVCKILTSKIVNVEAFRITMPKIWNLQ-EEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFFDN
        +  +W+N KLT  E  +A+  D    E   K L+ +L+CK+L+ + ++    + T+   W L  +   +  + FNI+L  F    D+  +L  GPW FD 
Subjt:  IFTQWENLKLTEPEQAMAILEDDQINEVENK-LQNALVCKILTSKIVNVEAFRITMPKIWNLQ-EEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFFDN

Query:  GPLLFQHPPRGTCKFIDIDFKYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIPIT
          ++  +P   T K +D+DF+    WVHF  L +AC ++ MA   GN +G F+ VE++    CWG  +RVRV+ DV KPL R +KL +        IPI 
Subjt:  GPLLFQHPPRGTCKFIDIDFKYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIPIT

Query:  YEKLMGFCFECGKLGHV-------------DDLQYGDWPR
        YE+L  F + CG+L H+              +LQYG W R
Subjt:  YEKLMGFCFECGKLGHV-------------DDLQYGDWPR

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]5.5e-3634.5Show/hide
Query:  EEIFTQWENLKLTEPEQAMAILEDDQINEVENKLQNALVCKILTSKIVNVEAFRITMPKIWNLQEEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFFDN
        +EI   WE+ K T  E     ++  +     + ++  +V K+ TSK ++ EA R  M  +W +    R + +  NIY+ +FK+  +K  VL +GPW F N
Subjt:  EEIFTQWENLKLTEPEQAMAILEDDQINEVENKLQNALVCKILTSKIVNVEAFRITMPKIWNLQEEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFFDN

Query:  GPLLFQHPPRGTCKFIDIDFKYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIPIT
          LL    P  T + +D++F +  FW+  H +P  C S +MA + G  +G  + +E D      G  +RVRVKIDV KPLRR +KLK  S G++   P+ 
Subjt:  GPLLFQHPPRGTCKFIDIDFKYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIPIT

Query:  YEKLMGFCFECGKLGHV--------------DDLQYGDWPRGMRREGDEKFKGIEYYW
        YEKL  FC+ECGK+GH                  QYGDW R    +        E +W
Subjt:  YEKLMGFCFECGKLGHV--------------DDLQYGDWPRGMRREGDEKFKGIEYYW

XP_042942919.1 uncharacterized protein LOC122277105 [Carya illinoinensis]4.6e-3532.19Show/hide
Query:  MEEEIFTQWENLKLTEPEQAMAILEDDQINEVENKLQNALVCKILTSKIVNVEAFRITMPKIWNLQEEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFF
        M +E+ + W +LKLTE EQ   +L ++    ++ K  + +    L  + VN EAF+ TM K+WNL+  +  + + FN +L  F+   DK+ VL+  PW F
Subjt:  MEEEIFTQWENLKLTEPEQAMAILEDDQINEVENKLQNALVCKILTSKIVNVEAFRITMPKIWNLQEEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFF

Query:  DNGPLLFQHPPRGTCKFIDIDFKYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIP
        D   L+            DI F+   FWV  H +P A  + +  ++ G+++G   TVETDD+G  WGR +RVRV +D+ KPL R   +KV   G++    
Subjt:  DNGPLLFQHPPRGTCKFIDIDFKYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIP

Query:  ITYEKLMGFCFECGKLGHVDDL------------QYGDWPRGMRREGDEKFKGIEYYWDEEDWEEDCNDSDYQNFRSSESAPNRWWGSPESE
          YE+L  FCF+CG+L H++              QYG W R     G  +F   + Y    +     N S  Q   +     N  W +  +E
Subjt:  ITYEKLMGFCFECGKLGHVDDL------------QYGDWPRGMRREGDEKFKGIEYYWDEEDWEEDCNDSDYQNFRSSESAPNRWWGSPESE

XP_042964753.1 uncharacterized protein LOC122298977 [Carya illinoinensis]1.3e-3434.45Show/hide
Query:  EEIFTQWENLKLTEPEQAMAILEDDQINEVENKLQNALVCKILTSKIVNVEAFRITMPKIWNLQEEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFFDN
        E++ + W NL+L E E    ++E++ ++E++ K   +L+ KIL+ + +  +    T+ KIW L +   ++ V  N+Y+ IF    DKQ ++E  PWFFD 
Subjt:  EEIFTQWENLKLTEPEQAMAILEDDQINEVENKLQNALVCKILTSKIVNVEAFRITMPKIWNLQEEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFFDN

Query:  GPLLFQHPPRGTCKFIDIDFKYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIPIT
        G L   +P  G     D+ F  A FWV FH LP+   +R++ +  G+ +G  + V+ DD+ + WG ++RV++ ID++KPL R     +   G +   P+ 
Subjt:  GPLLFQHPPRGTCKFIDIDFKYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIPIT

Query:  YEKLMGFCFECGKLGH--VD-------DLQYGDWPRGM
        YEKL  FCF CG++ H  VD         QYG W R +
Subjt:  YEKLMGFCFECGKLGH--VD-------DLQYGDWPRGM

TrEMBL top hitse value%identityAlignment
A0A5C7H9Y2 CCHC-type domain-containing protein3.2e-3431.84Show/hide
Query:  EEIFTQWENLKLTEPEQAMAILEDDQINEVENKLQNALVCKILTSKIVNVEAFRITMPKIWNLQEEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFFDN
        ++I  + E L L +    +  ++       E  L  +L+ K +T+K++N EAF+ T+  IW  + EV ++ +  NI+   F+   D++ +LE GPW FD 
Subjt:  EEIFTQWENLKLTEPEQAMAILEDDQINEVENKLQNALVCKILTSKIVNVEAFRITMPKIWNLQEEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFFDN

Query:  GPLLFQHPPRGTCKFIDIDFKYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIPIT
          LL      G+ K  D+ F+Y  FW+  H LP+AC +R++ +  G LVG  K ++  + G C G+ +R+RV IDV  PL+R +++ +G   +   + I 
Subjt:  GPLLFQHPPRGTCKFIDIDFKYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIPIT

Query:  YEKLMGFCFECGKLGHV--------------DDLQYGDWPRGMRR
        YE+L  FC+ CGK+GH+                 ++G W R + R
Subjt:  YEKLMGFCFECGKLGHV--------------DDLQYGDWPRGMRR

A0A5C7HC02 Uncharacterized protein3.8e-3536.6Show/hide
Query:  NLKLTEPEQAMAILEDDQINEVENKLQNALVCKILTSKIVNVEAFRITMPKIWNLQEEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFFDNGPLLFQHP
        +L + E +  + ILE+    E  N+L   L  KIL++K VN EAF   + KIW ++E   I++V  NI+   FK  +D+Q V+  GPW FDN  L+    
Subjt:  NLKLTEPEQAMAILEDDQINEVENKLQNALVCKILTSKIVNVEAFRITMPKIWNLQEEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFFDNGPLLFQHP

Query:  PRGTCKFIDIDFKYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIPITYEKLMGFC
        P G      I F  A FWV  HQ+PI C +RK+    G L+G    V+  + G   G+ MRVRV+I + +PL+R ++L +   G E+L+ + YE+L   C
Subjt:  PRGTCKFIDIDFKYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIPITYEKLMGFC

Query:  FECGKLGH----------------VDDLQYGDWPR
        F+CG + H                V+DL +G W R
Subjt:  FECGKLGH----------------VDDLQYGDWPR

A0A5E4G034 PREDICTED: DUF4283 domain-containing9.4e-3436.51Show/hide
Query:  MEEEIFTQWENLKLTEPEQAMAILEDDQINEVENKLQNALVCKILTSKIVNVEAFRITMPKIWNLQEEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFF
        M+E I +  + L LTE E+    +  + I++V  +L+ +LV K+LT+   N EAF+ TM KIW+   EV ++++  N++L IF    D+  VL +GPW F
Subjt:  MEEEIFTQWENLKLTEPEQAMAILEDDQINEVENKLQNALVCKILTSKIVNVEAFRITMPKIWNLQEEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFF

Query:  DNGPLLFQHPPRGTCKFIDIDFKYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIP
        D   +L +  P G+     +  KYA FW+  H +P++C S  +    GN  G    V    +G C GR +R+RV +DV KPLRR  K+ + S G    + 
Subjt:  DNGPLLFQHPPRGTCKFIDIDFKYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIP

Query:  ITYEKLMGFCFECGKLGHV--------------DDLQYGDW
          YE+L  FCF CG+LGHV              D+  YG W
Subjt:  ITYEKLMGFCFECGKLGHV--------------DDLQYGDW

A0A6J1BSZ1 uncharacterized protein LOC1110054816.5e-3534.58Show/hide
Query:  IFTQWENLKLTEPEQAMAILEDDQINEVENK-LQNALVCKILTSKIVNVEAFRITMPKIWNLQ-EEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFFDN
        +  +W+N KLT  E  +A+  D    E   K L+ +L+CK+L+ + ++    + T+   W L  +   +  + FNI+L  F    D+  +L  GPW FD 
Subjt:  IFTQWENLKLTEPEQAMAILEDDQINEVENK-LQNALVCKILTSKIVNVEAFRITMPKIWNLQ-EEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFFDN

Query:  GPLLFQHPPRGTCKFIDIDFKYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIPIT
          ++  +P   T K +D+DF+    WVHF  L +AC ++ MA   GN +G F+ VE++    CWG  +RVRV+ DV KPL R +KL +        IPI 
Subjt:  GPLLFQHPPRGTCKFIDIDFKYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIPIT

Query:  YEKLMGFCFECGKLGHV-------------DDLQYGDWPR
        YE+L  F + CG+L H+              +LQYG W R
Subjt:  YEKLMGFCFECGKLGHV-------------DDLQYGDWPR

A0A6J1D765 uncharacterized protein LOC1110179022.6e-3634.5Show/hide
Query:  EEIFTQWENLKLTEPEQAMAILEDDQINEVENKLQNALVCKILTSKIVNVEAFRITMPKIWNLQEEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFFDN
        +EI   WE+ K T  E     ++  +     + ++  +V K+ TSK ++ EA R  M  +W +    R + +  NIY+ +FK+  +K  VL +GPW F N
Subjt:  EEIFTQWENLKLTEPEQAMAILEDDQINEVENKLQNALVCKILTSKIVNVEAFRITMPKIWNLQEEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFFDN

Query:  GPLLFQHPPRGTCKFIDIDFKYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIPIT
          LL    P  T + +D++F +  FW+  H +P  C S +MA + G  +G  + +E D      G  +RVRVKIDV KPLRR +KLK  S G++   P+ 
Subjt:  GPLLFQHPPRGTCKFIDIDFKYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIPIT

Query:  YEKLMGFCFECGKLGHV--------------DDLQYGDWPRGMRREGDEKFKGIEYYW
        YEKL  FC+ECGK+GH                  QYGDW R    +        E +W
Subjt:  YEKLMGFCFECGKLGHV--------------DDLQYGDWPRGMRREGDEKFKGIEYYW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein2.5e-1025.51Show/hide
Query:  LEDDQINEVENKLQNALVCKILTSKIVNVEAFRITMPKIWNLQEEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFFDNGPLLFQH-PPRGTCKFIDIDF
        L +D +N    + +  L  + +  +  N+ +   +MP+IW     V  + ++   +  IF   +  + VL  GPW F++  +L Q   P+     I + F
Subjt:  LEDDQINEVENKLQNALVCKILTSKIVNVEAFRITMPKIWNLQEEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFFDNGPLLFQH-PPRGTCKFIDIDF

Query:  KYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIPITYEKLMGFCFECGKLGH
         +  FWV    +P    +R +    G  +G     + + E +      RV +  D+  PLR     +  + G  TL+   YE+L GFC  CG L H
Subjt:  KYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIPITYEKLMGFCFECGKLGH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGAAATCTTTACCCAATGGGAAAATCTGAAACTAACAGAACCAGAACAAGCAATGGCCATCTTGGAAGATGATCAAATAAACGAAGTAGAAAACAAACTACA
GAACGCATTAGTTTGCAAAATCTTGACATCAAAGATAGTGAATGTGGAGGCTTTTAGAATTACAATGCCAAAGATTTGGAATTTGCAGGAAGAAGTAAGAATCCAAAACG
TTGATTTCAACATCTACTTGTGTATATTCAAAGCTCCTAAGGATAAGCAAATGGTTCTGGAAAATGGGCCATGGTTCTTTGACAATGGACCGTTGCTTTTCCAACACCCT
CCAAGAGGAACCTGCAAATTCATAGACATAGACTTCAAATATGCCTATTTCTGGGTTCATTTTCACCAACTTCCGATAGCTTGCTTCTCAAGGAAAATGGCTATAGTATT
TGGCAATCTGGTTGGGAGTTTCAAAACCGTCGAAACCGATGATGAAGGAATGTGTTGGGGAAGAACTATGAGAGTTAGAGTAAAGATTGATGTGGAAAAGCCATTGAGAA
GAGTGGTGAAGTTGAAAGTAGGATCCATGGGAGAAGAAACTTTGATACCTATCACTTATGAAAAGCTCATGGGTTTCTGCTTTGAATGTGGAAAGCTAGGACATGTCGAC
GACTTACAGTATGGAGACTGGCCTAGAGGGATGAGAAGGGAAGGGGATGAGAAGTTTAAAGGAATAGAGTACTACTGGGACGAGGAGGACTGGGAAGAGGACTGTAATGA
CAGTGATTATCAGAACTTCAGGTCATCGGAATCAGCACCGAATAGATGGTGGGGGTCACCGGAATCTGAATCAGCACCAAATGGGCCGAAGCTGTGGGAACGAGAAGGGT
TTCAATGGGTCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAGAAATCTTTACCCAATGGGAAAATCTGAAACTAACAGAACCAGAACAAGCAATGGCCATCTTGGAAGATGATCAAATAAACGAAGTAGAAAACAAACTACA
GAACGCATTAGTTTGCAAAATCTTGACATCAAAGATAGTGAATGTGGAGGCTTTTAGAATTACAATGCCAAAGATTTGGAATTTGCAGGAAGAAGTAAGAATCCAAAACG
TTGATTTCAACATCTACTTGTGTATATTCAAAGCTCCTAAGGATAAGCAAATGGTTCTGGAAAATGGGCCATGGTTCTTTGACAATGGACCGTTGCTTTTCCAACACCCT
CCAAGAGGAACCTGCAAATTCATAGACATAGACTTCAAATATGCCTATTTCTGGGTTCATTTTCACCAACTTCCGATAGCTTGCTTCTCAAGGAAAATGGCTATAGTATT
TGGCAATCTGGTTGGGAGTTTCAAAACCGTCGAAACCGATGATGAAGGAATGTGTTGGGGAAGAACTATGAGAGTTAGAGTAAAGATTGATGTGGAAAAGCCATTGAGAA
GAGTGGTGAAGTTGAAAGTAGGATCCATGGGAGAAGAAACTTTGATACCTATCACTTATGAAAAGCTCATGGGTTTCTGCTTTGAATGTGGAAAGCTAGGACATGTCGAC
GACTTACAGTATGGAGACTGGCCTAGAGGGATGAGAAGGGAAGGGGATGAGAAGTTTAAAGGAATAGAGTACTACTGGGACGAGGAGGACTGGGAAGAGGACTGTAATGA
CAGTGATTATCAGAACTTCAGGTCATCGGAATCAGCACCGAATAGATGGTGGGGGTCACCGGAATCTGAATCAGCACCAAATGGGCCGAAGCTGTGGGAACGAGAAGGGT
TTCAATGGGTCAATTAA
Protein sequenceShow/hide protein sequence
MEEEIFTQWENLKLTEPEQAMAILEDDQINEVENKLQNALVCKILTSKIVNVEAFRITMPKIWNLQEEVRIQNVDFNIYLCIFKAPKDKQMVLENGPWFFDNGPLLFQHP
PRGTCKFIDIDFKYAYFWVHFHQLPIACFSRKMAIVFGNLVGSFKTVETDDEGMCWGRTMRVRVKIDVEKPLRRVVKLKVGSMGEETLIPITYEKLMGFCFECGKLGHVD
DLQYGDWPRGMRREGDEKFKGIEYYWDEEDWEEDCNDSDYQNFRSSESAPNRWWGSPESESAPNGPKLWEREGFQWVN