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HG10003901 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003901
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCACTA en-spm transposon protein
Genome locationChr08:11386614..11388430
RNA-Seq ExpressionHG10003901
SyntenyHG10003901
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038887408.1 poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida]7.9e-1448.65Show/hide
Query:  MQNYYQFDLSQHQVVRFIERQMQTTFKEYRSELHKHYKQFATPEEARACPPDRLKNALEDWHIVCTRFESPNFK
        MQ+Y+ FD+ +  V +++ +++Q TFKEYRS+L+KHY++F  P+EARACPP R+ +A  DW+++C R+E+P +K
Subjt:  MQNYYQFDLSQHQVVRFIERQMQTTFKEYRSELHKHYKQFATPEEARACPPDRLKNALEDWHIVCTRFESPNFK

XP_038887409.1 poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida]6.7e-1347.22Show/hide
Query:  NYYQFDLSQHQVVRFIERQMQTTFKEYRSELHKHYKQFATPEEARACPPDRLKNALEDWHIVCTRFESPNFK
        +Y+ FD+ +  V +++ +++Q TFKEYRS+L+KHY++F  P+EARACPP R+ +A  DW+++C R+E+P +K
Subjt:  NYYQFDLSQHQVVRFIERQMQTTFKEYRSELHKHYKQFATPEEARACPPDRLKNALEDWHIVCTRFESPNFK

XP_038887410.1 poly [ADP-ribose] polymerase 1-like isoform X3 [Benincasa hispida]7.9e-1448.65Show/hide
Query:  MQNYYQFDLSQHQVVRFIERQMQTTFKEYRSELHKHYKQFATPEEARACPPDRLKNALEDWHIVCTRFESPNFK
        MQ+Y+ FD+ +  V +++ +++Q TFKEYRS+L+KHY++F  P+EARACPP R+ +A  DW+++C R+E+P +K
Subjt:  MQNYYQFDLSQHQVVRFIERQMQTTFKEYRSELHKHYKQFATPEEARACPPDRLKNALEDWHIVCTRFESPNFK

XP_038887411.1 poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida]7.9e-1448.65Show/hide
Query:  MQNYYQFDLSQHQVVRFIERQMQTTFKEYRSELHKHYKQFATPEEARACPPDRLKNALEDWHIVCTRFESPNFK
        MQ+Y+ FD+ +  V +++ +++Q TFKEYRS+L+KHY++F  P+EARACPP R+ +A  DW+++C R+E+P +K
Subjt:  MQNYYQFDLSQHQVVRFIERQMQTTFKEYRSELHKHYKQFATPEEARACPPDRLKNALEDWHIVCTRFESPNFK

XP_038887413.1 uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida]7.9e-1448.65Show/hide
Query:  MQNYYQFDLSQHQVVRFIERQMQTTFKEYRSELHKHYKQFATPEEARACPPDRLKNALEDWHIVCTRFESPNFK
        MQ+Y+ FD+ +  V +++ +++Q TFKEYRS+L+KHY++F  P+EARACPP R+ +A  DW+++C R+E+P +K
Subjt:  MQNYYQFDLSQHQVVRFIERQMQTTFKEYRSELHKHYKQFATPEEARACPPDRLKNALEDWHIVCTRFESPNFK

TrEMBL top hitse value%identityAlignment
A0A5A7T4P0 CACTA en-spm transposon protein6.1e-1244.74Show/hide
Query:  MQNYYQFDLSQHQVVRFIERQMQTTFKEYRSELHKHYKQFATPEEARACPPDRLKNALEDWHIVCTRFESPNFKDQ
        +Q ++  D +   + RF+E QM TTFKE+R++ HKH+K+++ PEEARA PP+ L    EDWH +C  + S  F++Q
Subjt:  MQNYYQFDLSQHQVVRFIERQMQTTFKEYRSELHKHYKQFATPEEARACPPDRLKNALEDWHIVCTRFESPNFKDQ

A0A5A7U0Z1 CACTA en-spm transposon protein4.7e-1246.05Show/hide
Query:  MQNYYQFDLSQHQVVRFIERQMQTTFKEYRSELHKHYKQFATPEEARACPPDRLKNALEDWHIVCTRFESPNFKDQ
        +Q ++  D +   + RFIE QM TTFKE+R++ HKH+K+++ PEEARA PP+ L    EDWH +C  + S  F++Q
Subjt:  MQNYYQFDLSQHQVVRFIERQMQTTFKEYRSELHKHYKQFATPEEARACPPDRLKNALEDWHIVCTRFESPNFKDQ

A0A5A7VAR5 CACTA en-spm transposon protein4.7e-1244.74Show/hide
Query:  MQNYYQFDLSQHQVVRFIERQMQTTFKEYRSELHKHYKQFATPEEARACPPDRLKNALEDWHIVCTRFESPNFKDQ
        +Q  +  D + H + RF+E QM TTFKE+R++ H+H+K+++ PEEARA PP+ L    EDWH +C  + S  F++Q
Subjt:  MQNYYQFDLSQHQVVRFIERQMQTTFKEYRSELHKHYKQFATPEEARACPPDRLKNALEDWHIVCTRFESPNFKDQ

A0A5D3DD82 CACTA en-spm transposon protein6.1e-1244.74Show/hide
Query:  MQNYYQFDLSQHQVVRFIERQMQTTFKEYRSELHKHYKQFATPEEARACPPDRLKNALEDWHIVCTRFESPNFKDQ
        +Q ++  D +   + RF+E QM TTFKE+R++ HKH+K+++ PEEARA PP+ L    EDWH +C  + S  F++Q
Subjt:  MQNYYQFDLSQHQVVRFIERQMQTTFKEYRSELHKHYKQFATPEEARACPPDRLKNALEDWHIVCTRFESPNFKDQ

A0A6J1DUH3 uncharacterized protein LOC1110232122.7e-1251.35Show/hide
Query:  QNYYQFDLSQHQVVRFIERQMQTTFKEYRSELHKHYKQFATPEEARACPPDRLKNALEDWHIVCTRFESPNFKD
        Q +++ DLS+  V +FIE+QMQ +FK+YRS+LH++Y +F  P EARA PP+RL N  EDW+ +C R+E+P +K+
Subjt:  QNYYQFDLSQHQVVRFIERQMQTTFKEYRSELHKHYKQFATPEEARACPPDRLKNALEDWHIVCTRFESPNFKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAACTATTATCAGTTTGATTTGTCCCAACATCAAGTTGTGAGATTTATTGAACGACAAATGCAAACTACATTTAAAGAGTATAGGTCAGAGTTGCATAAACACTA
TAAACAATTTGCAACTCCTGAAGAGGCACGTGCATGCCCACCTGATCGGCTTAAGAATGCACTTGAAGATTGGCATATCGTATGCACGAGGTTTGAGAGCCCTAATTTTA
AGGATCAATGTTATGTTCGTGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAACTATTATCAGTTTGATTTGTCCCAACATCAAGTTGTGAGATTTATTGAACGACAAATGCAAACTACATTTAAAGAGTATAGGTCAGAGTTGCATAAACACTA
TAAACAATTTGCAACTCCTGAAGAGGCACGTGCATGCCCACCTGATCGGCTTAAGAATGCACTTGAAGATTGGCATATCGTATGCACGAGGTTTGAGAGCCCTAATTTTA
AGGATCAATGTTATGTTCGTGACTAA
Protein sequenceShow/hide protein sequence
MQNYYQFDLSQHQVVRFIERQMQTTFKEYRSELHKHYKQFATPEEARACPPDRLKNALEDWHIVCTRFESPNFKDQCYVRD