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HG10003910 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003910
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr08:11511677..11511985
RNA-Seq ExpressionHG10003910
SyntenyHG10003910
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049654.1 hypothetical protein E6C27_scaffold163G001230 [Cucumis melo var. makuwa]4.9e-2175.68Show/hide
Query:  RRSSAGVGGLGVQLAIVTGETETFDGGLEDVVEEGVVGRPFGLGAGETAGDFRERNGEMLEGLWDLEMLVEDAI
        +RSS GV GLG+QLA+V GE ETFDGGLEDVVEEGVVGRPFGL A +  GDFRE+NGEM++G  DLE LVEDAI
Subjt:  RRSSAGVGGLGVQLAIVTGETETFDGGLEDVVEEGVVGRPFGLGAGETAGDFRERNGEMLEGLWDLEMLVEDAI
PON73208.1 hypothetical protein PanWU01x14_060490, partial [Parasponia andersonii]2.5e-0953.85Show/hide
Query:  MTSRRSSAGVGGLGVQLAIVTGETETFDGGLEDVVEEGVVGRPFGLGAGETAGDFRERNGEML----EGLWDLEMLVE
        + S RS   +GG+ + LA V GE ++ DGGL+DVVEEGVVGRP  L  G   GDFR+R GEM+    E LWDLE++ E
Subjt:  MTSRRSSAGVGGLGVQLAIVTGETETFDGGLEDVVEEGVVGRPFGLGAGETAGDFRERNGEML----EGLWDLEMLVE
PON94613.1 hypothetical protein TorRG33x02_096480 [Trema orientale]6.7e-1051.81Show/hide
Query:  VGGLGVQLAIVTGETETFDGGLEDVVEEGVVGRPFGLGAGETAGDFRERNGEML----EGLWDLEMLVEDAIYRTTTMKQQEE
        +GG+ + LA V GE ++ DGGL+DVVEEGVVGRP GL  G   GDFR+R GEM+    E LWDLE++VE  + R   ++++ E
Subjt:  VGGLGVQLAIVTGETETFDGGLEDVVEEGVVGRPFGLGAGETAGDFRERNGEML----EGLWDLEMLVEDAIYRTTTMKQQEE
TrEMBL top hitse value%identityAlignment
A0A2P5DIT1 Uncharacterized protein (Fragment)1.2e-0953.85Show/hide
Query:  MTSRRSSAGVGGLGVQLAIVTGETETFDGGLEDVVEEGVVGRPFGLGAGETAGDFRERNGEML----EGLWDLEMLVE
        + S RS   +GG+ + LA V GE ++ DGGL+DVVEEGVVGRP  L  G   GDFR+R GEM+    E LWDLE++ E
Subjt:  MTSRRSSAGVGGLGVQLAIVTGETETFDGGLEDVVEEGVVGRPFGLGAGETAGDFRERNGEML----EGLWDLEMLVE
A0A2P5FA12 Uncharacterized protein3.2e-1051.81Show/hide
Query:  VGGLGVQLAIVTGETETFDGGLEDVVEEGVVGRPFGLGAGETAGDFRERNGEML----EGLWDLEMLVEDAIYRTTTMKQQEE
        +GG+ + LA V GE ++ DGGL+DVVEEGVVGRP GL  G   GDFR+R GEM+    E LWDLE++VE  + R   ++++ E
Subjt:  VGGLGVQLAIVTGETETFDGGLEDVVEEGVVGRPFGLGAGETAGDFRERNGEML----EGLWDLEMLVEDAIYRTTTMKQQEE
A0A5A7U327 Uncharacterized protein2.4e-2175.68Show/hide
Query:  RRSSAGVGGLGVQLAIVTGETETFDGGLEDVVEEGVVGRPFGLGAGETAGDFRERNGEMLEGLWDLEMLVEDAI
        +RSS GV GLG+QLA+V GE ETFDGGLEDVVEEGVVGRPFGL A +  GDFRE+NGEM++G  DLE LVEDAI
Subjt:  RRSSAGVGGLGVQLAIVTGETETFDGGLEDVVEEGVVGRPFGLGAGETAGDFRERNGEMLEGLWDLEMLVEDAI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCGAGACGGTCAAGTGCGGGAGTAGGAGGGCTCGGTGTACAACTAGCAATTGTCACCGGAGAAACCGAAACCTTCGACGGAGGCCTCGAAGACGTCGTGGAAGA
AGGAGTCGTAGGTCGACCATTCGGCCTGGGCGCCGGTGAAACCGCCGGAGACTTCCGTGAGCGGAATGGCGAGATGTTAGAAGGTCTTTGGGACCTAGAAATGCTCGTCG
AGGACGCCATTTACAGAACAACAACAATGAAACAACAAGAAGAAGAAGAAATCGAGCACAGAAATATGGGAAATGCAAACGCTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACATCGAGACGGTCAAGTGCGGGAGTAGGAGGGCTCGGTGTACAACTAGCAATTGTCACCGGAGAAACCGAAACCTTCGACGGAGGCCTCGAAGACGTCGTGGAAGA
AGGAGTCGTAGGTCGACCATTCGGCCTGGGCGCCGGTGAAACCGCCGGAGACTTCCGTGAGCGGAATGGCGAGATGTTAGAAGGTCTTTGGGACCTAGAAATGCTCGTCG
AGGACGCCATTTACAGAACAACAACAATGAAACAACAAGAAGAAGAAGAAATCGAGCACAGAAATATGGGAAATGCAAACGCTGATTGA
Protein sequenceShow/hide protein sequence
MTSRRSSAGVGGLGVQLAIVTGETETFDGGLEDVVEEGVVGRPFGLGAGETAGDFRERNGEMLEGLWDLEMLVEDAIYRTTTMKQQEEEEIEHRNMGNANAD