CuGenDBv2

Gene ID	HG10003911
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	40S ribosomal protein S8
Genome location	Chr08:11516208..11523218
RNA-Seq Expression	HG10003911
Synteny	HG10003911
Gene Ontology terms	GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0006412 - translation (biological process) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001047 - Ribosomal protein S8e IPR022309 - Ribosomal protein S8e/ribosomal biogenesis NSA2

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6578955.1 40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-97

86.55

Show/hide

Query:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
        R    K R  G  +  W        K++YELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
Subjt:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV

Query:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGD-AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYIL
        KSAIVQVDAAPFKQWYLQHYGVDIGRKKK+AASAKK+E+GD AAATEEVKKSNHVQRKLEKRQ+ RKLDPHIEEQFSSGRLMACISSRPGQCGRADGYIL
Subjt:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGD-AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYIL

Query:  EGKELEFYMKKLQRKKGKSAGAA
        EGKELEFYMKKLQRKKGK AGAA
Subjt:  EGKELEFYMKKLQRKKGKSAGAA

XP_004149800.1 40S ribosomal protein S8 [Cucumis sativus]

1.1e-98

87.05

Show/hide

Query:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
        R    K R  G  +  W        K++YELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAV+RKTRILDVVYNASNNELVRTQTLV
Subjt:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV

Query:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGD--AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYI
        KSA+VQVDAAPFKQWYLQHYGVDIGRKKK+AASAKKDEEGD  AAA EEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYI
Subjt:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGD--AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYI

Query:  LEGKELEFYMKKLQRKKGKSAGAA
        LEGKELEFYMKKLQRKKGK AGAA
Subjt:  LEGKELEFYMKKLQRKKGKSAGAA

XP_008466734.1 PREDICTED: 40S ribosomal protein S8-2 [Cucumis melo]

2.5e-100

88.29

Show/hide

Query:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
        R    K R  G  +  W        K++YELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
Subjt:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV

Query:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILE
        KSAIVQVDAAPFKQWYLQHYGVDIGRKKK+AAS KKDEEGDAAA EEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILE
Subjt:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILE

Query:  GKELEFYMKKLQRKKGKSAGAA
        GKELEFYMKKLQRKKGK AGAA
Subjt:  GKELEFYMKKLQRKKGKSAGAA

XP_022939829.1 40S ribosomal protein S8 [Cucurbita moschata]

1.5e-97

86.55

Show/hide

Query:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
        R    K R  G  +  W        K++YELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
Subjt:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV

Query:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGD-AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYIL
        KSAIVQVDAAPFKQWYLQHYGVDIGRKKK+AASAKK+EEGD AAATEE KKSNHVQRKLEKRQ+ RKLDPHIEEQFSSGRLMACISSRPGQCGRADGYIL
Subjt:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGD-AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYIL

Query:  EGKELEFYMKKLQRKKGKSAGAA
        EGKELEFYMKKLQRKKGK AGAA
Subjt:  EGKELEFYMKKLQRKKGKSAGAA

XP_038884004.1 40S ribosomal protein S8-2 [Benincasa hispida]

1.5e-100

88.29

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Query:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
        R    K R  G  +  W        K++YELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
Subjt:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV

Query:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILE
        KSAIVQVDAAPFKQWYLQHYGVDIGRKKK+AASAKKDEEGDAAA EEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILE
Subjt:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILE

Query:  GKELEFYMKKLQRKKGKSAGAA
        GKELEFYMKK+QRKKGK AGAA
Subjt:  GKELEFYMKKLQRKKGKSAGAA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KFT0 40S ribosomal protein S8

5.1e-99

87.05

Show/hide

Query:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
        R    K R  G  +  W        K++YELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAV+RKTRILDVVYNASNNELVRTQTLV
Subjt:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV

Query:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGD--AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYI
        KSA+VQVDAAPFKQWYLQHYGVDIGRKKK+AASAKKDEEGD  AAA EEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYI
Subjt:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGD--AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYI

Query:  LEGKELEFYMKKLQRKKGKSAGAA
        LEGKELEFYMKKLQRKKGK AGAA
Subjt:  LEGKELEFYMKKLQRKKGKSAGAA

A0A1S3CRZ5 40S ribosomal protein S8

1.2e-100

88.29

Show/hide

Query:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
        R    K R  G  +  W        K++YELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
Subjt:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV

Query:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILE
        KSAIVQVDAAPFKQWYLQHYGVDIGRKKK+AAS KKDEEGDAAA EEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILE
Subjt:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILE

Query:  GKELEFYMKKLQRKKGKSAGAA
        GKELEFYMKKLQRKKGK AGAA
Subjt:  GKELEFYMKKLQRKKGKSAGAA

A0A5D3CAQ0 40S ribosomal protein S8

1.2e-100

88.29

Show/hide

Query:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
        R    K R  G  +  W        K++YELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
Subjt:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV

Query:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILE
        KSAIVQVDAAPFKQWYLQHYGVDIGRKKK+AAS KKDEEGDAAA EEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILE
Subjt:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILE

Query:  GKELEFYMKKLQRKKGKSAGAA
        GKELEFYMKKLQRKKGK AGAA
Subjt:  GKELEFYMKKLQRKKGKSAGAA

A0A6J1FIB1 40S ribosomal protein S8

7.4e-98

86.55

Show/hide

Query:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
        R    K R  G  +  W        K++YELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
Subjt:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV

Query:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGD-AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYIL
        KSAIVQVDAAPFKQWYLQHYGVDIGRKKK+AASAKK+EEGD AAATEE KKSNHVQRKLEKRQ+ RKLDPHIEEQFSSGRLMACISSRPGQCGRADGYIL
Subjt:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGD-AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYIL

Query:  EGKELEFYMKKLQRKKGKSAGAA
        EGKELEFYMKKLQRKKGK AGAA
Subjt:  EGKELEFYMKKLQRKKGKSAGAA

A0A6J1K1I2 40S ribosomal protein S8

7.4e-98

86.55

Show/hide

Query:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
        R    K R  G  +  W        K++YELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
Subjt:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV

Query:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGD-AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYIL
        KSAIVQVDAAPFKQWYLQHYGVDIGRKKK+AASAKK+EEGD AAATEE KKSNHVQRKLEKRQ+ RKLDPHIEEQFSSGRLMACISSRPGQCGRADGYIL
Subjt:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGD-AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYIL

Query:  EGKELEFYMKKLQRKKGKSAGAA
        EGKELEFYMKKLQRKKGK AGAA
Subjt:  EGKELEFYMKKLQRKKGKSAGAA

SwissProt top hits

e value

%identity

Alignment

O81361 40S ribosomal protein S8

3.0e-88

76.58

Show/hide

Query:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
        R    K R  G  +  W        K++YELGRQPANTKLSS+K++RRIRVRGGNVKWRA RLDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLV
Subjt:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV

Query:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILE
        KSAIVQVDAAPFKQWYLQHYGV+IGRKKK+AA+ K   E   A TEE KKSNHV  KLEKRQ+GR LD HIEEQF  G+L+ACISSRPGQCG+ADG ILE
Subjt:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILE

Query:  GKELEFYMKKLQRKKGKSAGAA
        GKELEFYMKKLQRKKGK AGAA
Subjt:  GKELEFYMKKLQRKKGKSAGAA

P49199 40S ribosomal protein S8

5.5e-90

79.37

Show/hide

Query:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
        R    K R  G  +  W        K++YELGRQPANTKLSS+K++RR+RVRGGNVKWRA RLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
Subjt:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV

Query:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGD--AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYI
        KSAIVQVDAAPFKQWYL HYGVDIGRKKK A +AKKD EG    A TEE KKSNHV RKLEKRQ+GR LD HIEEQF SGRL+ACISSRPGQCGRADGYI
Subjt:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGD--AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYI

Query:  LEGKELEFYMKKLQRKKGKSAGA
        LEGKELEFYMKKLQRKKGK A A
Subjt:  LEGKELEFYMKKLQRKKGKSAGA

Q08069 40S ribosomal protein S8

1.4e-90

78.92

Show/hide

Query:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
        R    K R  G  +  W        K++YELGRQPANTKLSS+K++RR+RVRGGNVKWRA RLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
Subjt:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV

Query:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGD--AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYI
        KSAIVQVDAAPFKQWYL HYGVDIGRKKK+ A+ K + EG    AA EE KKSNHV RKLEKR+EGR LDPHIEEQF SGRL+ACISSRPGQCGRADGYI
Subjt:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGD--AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYI

Query:  LEGKELEFYMKKLQRKKGKSAGA
        LEGKELEFYMKKLQRKKGKSA A
Subjt:  LEGKELEFYMKKLQRKKGKSAGA

Q93VG5 40S ribosomal protein S8-1

2.5e-87

74.89

Show/hide

Query:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
        R    K R  G  +  W        K++YE+GRQPANTKLSS+K++RRIRVRGGNVKWRA RLDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLV
Subjt:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV

Query:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKD----EEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADG
        KSAIVQVDAAPFKQWYL HYGV++GRKKKSA+S KKD    EE   AA EEVKKSNH+ RK+  RQEGR LD HIE+QF+SGRL+ACISSRPGQCGRADG
Subjt:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKD----EEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADG

Query:  YILEGKELEFYMKKLQRKKGKSA
        YILEGKELEFYMKK+Q+KKGK A
Subjt:  YILEGKELEFYMKKLQRKKGKSA

Q9FIF3 40S ribosomal protein S8-2

5.1e-88

77.48

Show/hide

Query:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
        R    K R  G  +  W        K++YELGRQPANTKLSS+K++RRIRVRGGNVKWRA RLDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLV
Subjt:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV

Query:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILE
        KSAIVQVDAAPFKQ YLQHYGVDIGRKKK          G+A  TEEVKKSNHVQRKLE RQEGR LD H+EEQFSSGRL+ACI+SRPGQCGRADGYILE
Subjt:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILE

Query:  GKELEFYMKKLQRKKGKSAGAA
        GKELEFYMKKLQ+KKGK+AGAA
Subjt:  GKELEFYMKKLQRKKGKSAGAA

Arabidopsis top hits

e value

%identity

Alignment

AT5G20290.1 Ribosomal protein S8e family protein

1.8e-88

74.89

Show/hide

Query:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
        R    K R  G  +  W        K++YE+GRQPANTKLSS+K++RRIRVRGGNVKWRA RLDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLV
Subjt:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV

Query:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKD----EEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADG
        KSAIVQVDAAPFKQWYL HYGV++GRKKKSA+S KKD    EE   AA EEVKKSNH+ RK+  RQEGR LD HIE+QF+SGRL+ACISSRPGQCGRADG
Subjt:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKD----EEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADG

Query:  YILEGKELEFYMKKLQRKKGKSA
        YILEGKELEFYMKK+Q+KKGK A
Subjt:  YILEGKELEFYMKKLQRKKGKSA

AT5G59240.1 Ribosomal protein S8e family protein

3.6e-89

77.48

Show/hide

Query:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV
        R    K R  G  +  W        K++YELGRQPANTKLSS+K++RRIRVRGGNVKWRA RLDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLV
Subjt:  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLV

Query:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILE
        KSAIVQVDAAPFKQ YLQHYGVDIGRKKK          G+A  TEEVKKSNHVQRKLE RQEGR LD H+EEQFSSGRL+ACI+SRPGQCGRADGYILE
Subjt:  KSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILE

Query:  GKELEFYMKKLQRKKGKSAGAA
        GKELEFYMKKLQ+KKGK+AGAA
Subjt:  GKELEFYMKKLQRKKGKSAGAA

Sequences

Show/hide sequences

CDS sequence

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ATGACTAAGTTTTGCCTAAAGAAGTCAAAACCAAACCAAACGTCAAAAAGAGGGAGGAAAAAAAGCCAAAAGCCCAGAAAACAGGGTAGTGTCCGTGCTCCGTGGCACTA
CAACTTGGCATCAACCACAAAGAAGAGGTATGAGCTTGGAAGGCAACCTGCCAACACTAAATTATCCAGCGACAAGTCAATCAGGAGGATTCGAGTTCGTGGGGGTAATG
TGAAGTGGCGTGCCTTTAGGCTCGATACTGGAAACTACTCGTGGGGTAGTGAGGCTGTGACTAGGAAAACCCGTATTCTTGATGTGGTGTACAATGCATCAAACAATGAG
CTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCACCATTCAAGCAGTGGTATCTTCAGCACTACGGAGTGGATATTGGAAGGAAGAAGAA
GTCTGCAGCATCTGCTAAGAAGGACGAGGAAGGTGATGCTGCCGCCACCGAGGAGGTGAAGAAGAGTAACCACGTTCAGCGCAAGCTGGAGAAACGTCAAGAGGGTCGTA
AGCTTGACCCACATATTGAAGAGCAATTCAGCAGTGGTCGTTTGATGGCTTGTATTTCATCAAGACCAGGTCAATGTGGTCGAGCAGATGGATATATCTTGGAGGGCAAA
GAACTTGAATTCTACATGAAGAAGCTCCAGAGAAAGAAGGGAAAGAGTGCAGGTGCTGCTTAA

mRNA sequence

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Protein sequence

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MTKFCLKKSKPNQTSKRGRKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNE
LVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILEGK
ELEFYMKKLQRKKGKSAGAA

HG10003911 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome