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HG10003946 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003946
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr08:11979190..11979606
RNA-Seq ExpressionHG10003946
SyntenyHG10003946
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647204.1 hypothetical protein Csa_019006, partial [Cucumis sativus]5.7e-1265.22Show/hide
Query:  VVMVEPALAEASNQAVQTAIGYKAGGGKLGSVIPKKRKLVKTMIYHSIKDFVISLFRPSPSADVGTEAP
        V MVE  +AEASN AVQ  +GYK G  K+ SVIPK+RKLVKTM+YHSIK F+IS FR S S   GT AP
Subjt:  VVMVEPALAEASNQAVQTAIGYKAGGGKLGSVIPKKRKLVKTMIYHSIKDFVISLFRPSPSADVGTEAP

KAG6578935.1 hypothetical protein SDJN03_23383, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1041.74Show/hide
Query:  LKPQPFADKIPSIPIPIPSAMDVTEVGRKTFPVNLITGTELGVKVRPEGEWMDVVMVEPALAEASNQAVQTAIGYKAGGGKLGSVIPKKRKLVKTMIYHS
        +KP+P  +KIP + IP      +  VG K FP  +I G++  + VRP       +   PA+AE +N+ VQ             SVIPKKR+LVKTM+YHS
Subjt:  LKPQPFADKIPSIPIPIPSAMDVTEVGRKTFPVNLITGTELGVKVRPEGEWMDVVMVEPALAEASNQAVQTAIGYKAGGGKLGSVIPKKRKLVKTMIYHS

Query:  IKDFVISLFRPSPSA
        +K+F+ S+FR  PSA
Subjt:  IKDFVISLFRPSPSA

KAG6602131.1 hypothetical protein SDJN03_07364, partial [Cucurbita argyrosperma subsp. sororia]3.4e-0935.71Show/hide
Query:  MASRISPEDNRIPLLLKPQPFADKIPSI------PIPIPSAMDVTEVGRKTFPVNLITGTELGV----KVRPE----------------GEWMDVVMVEP
        M  R+SP+DNR+  L +  P A  +PSI      PI  P+  +++ + +   P  +  G    V       PE                G+   V+ + P
Subjt:  MASRISPEDNRIPLLLKPQPFADKIPSI------PIPIPSAMDVTEVGRKTFPVNLITGTELGV----KVRPE----------------GEWMDVVMVEP

Query:  ALAEASNQAVQTAIGYKAGGGKLGSVIPKKRKLVKTMIYHSIKDFVISLFRPSP
        A  E +  +   ++GY+AG GK+ SVIPKKRKLVKTM+YH IK+F+ SLFR  P
Subjt:  ALAEASNQAVQTAIGYKAGGGKLGSVIPKKRKLVKTMIYHSIKDFVISLFRPSP

KAG6602134.1 hypothetical protein SDJN03_07367, partial [Cucurbita argyrosperma subsp. sororia]2.0e-0938.35Show/hide
Query:  MASRISPEDNRIPLLLKPQPFADKIPSI-----PIPIPSAMDVTEVGRKTFPVNLITGTELGVKVRPEGEWMDVVMVEPALAEASNQAVQTAIGYKAGGG
        M  R+SP+DNR   L +  P A   PS+     P   P   ++  + +   P  +  G    V        + ++  +P  A  S  +V+    Y+AG G
Subjt:  MASRISPEDNRIPLLLKPQPFADKIPSI-----PIPIPSAMDVTEVGRKTFPVNLITGTELGVKVRPEGEWMDVVMVEPALAEASNQAVQTAIGYKAGGG

Query:  KLGSVIPKKRKLVKTMIYHSIKDFVISLFRPSP
        K+ SVIPKKRKLVKTM+YH IKDF+ SLFRP P
Subjt:  KLGSVIPKKRKLVKTMIYHSIKDFVISLFRPSP

KGN47677.1 hypothetical protein Csa_018325 [Cucumis sativus]1.6e-1958.82Show/hide
Query:  MDVTEVGRKTFPVNLITGTELGVKVRPEGEWMDVVMVEPALAEASNQAVQTAIGYKAGGGKLGSVIPKKRKLVKTMIYHSIKDFVISLFRPSPSADVGTE
        MDV  VG + FP+NL+TG+ELG++VRPEGE M V  VE    EAS++ VQ A+GYK GG K+ SVIP KRKLVK M+Y SIK+FVIS F   PS      
Subjt:  MDVTEVGRKTFPVNLITGTELGVKVRPEGEWMDVVMVEPALAEASNQAVQTAIGYKAGGGKLGSVIPKKRKLVKTMIYHSIKDFVISLFRPSPSADVGTE

Query:  AP
        AP
Subjt:  AP

TrEMBL top hitse value%identityAlignment
A0A0A0KDQ7 Uncharacterized protein1.3e-0678.38Show/hide
Query:  KAGGGKLGSVIPKKRKLVKTMIYHSIKDFVISLFRPS
        + GG K+ SVIPK+RKLVKTMIYHS+KDF+ISLFRPS
Subjt:  KAGGGKLGSVIPKKRKLVKTMIYHSIKDFVISLFRPS

A0A0A0KH01 Uncharacterized protein8.0e-2058.82Show/hide
Query:  MDVTEVGRKTFPVNLITGTELGVKVRPEGEWMDVVMVEPALAEASNQAVQTAIGYKAGGGKLGSVIPKKRKLVKTMIYHSIKDFVISLFRPSPSADVGTE
        MDV  VG + FP+NL+TG+ELG++VRPEGE M V  VE    EAS++ VQ A+GYK GG K+ SVIP KRKLVK M+Y SIK+FVIS F   PS      
Subjt:  MDVTEVGRKTFPVNLITGTELGVKVRPEGEWMDVVMVEPALAEASNQAVQTAIGYKAGGGKLGSVIPKKRKLVKTMIYHSIKDFVISLFRPSPSADVGTE

Query:  AP
        AP
Subjt:  AP

A0A5D3D590 Uncharacterized protein4.2e-0552.73Show/hide
Query:  PALAEASNQAVQTAIGYKAGGGKLGSVIPKKRKLVKTMIYHSIKDFVISLFRPSP
        P + E +  A++ AI Y+ G G + SVIPKKRKLVK M+Y  IK+++ SLFRP+P
Subjt:  PALAEASNQAVQTAIGYKAGGGKLGSVIPKKRKLVKTMIYHSIKDFVISLFRPSP

A0A6J1CJW3 uncharacterized protein LOC1110119631.6e-0740Show/hide
Query:  MASRISPEDNRIPLLLKPQPFADKIPSIPIPIPSAMDVTEVGRKTFPVNLITGTELGVKVRPEGEWMDVVMVEPALAEASNQAVQTAIGYKAGGGKLGSV
        M  R+ PE++R+  LLKP+P AD                             GTEL           + VM+      A+      AIG +A GGK+ SV
Subjt:  MASRISPEDNRIPLLLKPQPFADKIPSIPIPIPSAMDVTEVGRKTFPVNLITGTELGVKVRPEGEWMDVVMVEPALAEASNQAVQTAIGYKAGGGKLGSV

Query:  IPKKRKLVKTMIYHSIKDFVISLFRPSPSA
        IPK+R LVKTMIY+ IKDF+ISLFRP PSA
Subjt:  IPKKRKLVKTMIYHSIKDFVISLFRPSPSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCCAGAATCTCGCCGGAAGACAATCGTATTCCTCTGCTTCTTAAACCCCAACCATTCGCCGACAAAATTCCCTCCATTCCGATTCCGATTCCGTCCGCCATGGA
CGTGACGGAGGTGGGCCGTAAAACGTTTCCGGTGAACTTAATCACCGGAACAGAACTGGGCGTGAAGGTGAGACCCGAAGGAGAGTGGATGGACGTGGTGATGGTGGAGC
CGGCGTTGGCGGAAGCATCCAACCAGGCGGTTCAGACGGCGATCGGGTACAAAGCCGGCGGTGGAAAATTGGGATCTGTAATTCCGAAGAAGAGGAAGTTAGTGAAGACA
ATGATATATCACTCCATAAAGGATTTTGTTATATCACTCTTCCGTCCGTCGCCGTCTGCCGACGTCGGTACCGAAGCTCCGTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCCAGAATCTCGCCGGAAGACAATCGTATTCCTCTGCTTCTTAAACCCCAACCATTCGCCGACAAAATTCCCTCCATTCCGATTCCGATTCCGTCCGCCATGGA
CGTGACGGAGGTGGGCCGTAAAACGTTTCCGGTGAACTTAATCACCGGAACAGAACTGGGCGTGAAGGTGAGACCCGAAGGAGAGTGGATGGACGTGGTGATGGTGGAGC
CGGCGTTGGCGGAAGCATCCAACCAGGCGGTTCAGACGGCGATCGGGTACAAAGCCGGCGGTGGAAAATTGGGATCTGTAATTCCGAAGAAGAGGAAGTTAGTGAAGACA
ATGATATATCACTCCATAAAGGATTTTGTTATATCACTCTTCCGTCCGTCGCCGTCTGCCGACGTCGGTACCGAAGCTCCGTCATAA
Protein sequenceShow/hide protein sequence
MASRISPEDNRIPLLLKPQPFADKIPSIPIPIPSAMDVTEVGRKTFPVNLITGTELGVKVRPEGEWMDVVMVEPALAEASNQAVQTAIGYKAGGGKLGSVIPKKRKLVKT
MIYHSIKDFVISLFRPSPSADVGTEAPS