; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003948 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003948
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionFormin-like protein 4 isoform X2
Genome locationChr08:12009613..12010218
RNA-Seq ExpressionHG10003948
SyntenyHG10003948
Gene Ontology termsNA
InterPro domainsIPR004252 - Probable transposase, Ptta/En/Spm, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046978.1 formin-like protein 4 isoform X2 [Cucumis melo var. makuwa]2.5e-3261.74Show/hide
Query:  HKRKKKEEGTEISEIDLFQITHSNEKKGWVNEAKTKYDEMMALKTASSQEGSEPLLDKEICEQVLGKRPGHVKVLGWVPRPRNARNEASYQTAKETKAEI
        H   +KEEG E+SEI+LFQ+THSNEK GWVNEAK KYDEM+ LKT SSQEGSEPLL+++IC++VLGKR GHVK  GW PRP+NARNE      K+  A+I
Subjt:  HKRKKKEEGTEISEIDLFQITHSNEKKGWVNEAKTKYDEMMALKTASSQEGSEPLLDKEICEQVLGKRPGHVKVLGWVPRPRNARNEASYQTAKETKAEI

Query:  AHLQRLLHRNKLQLK
        AHLQ ++   +  ++
Subjt:  AHLQRLLHRNKLQLK

KAA0068182.1 formin-like protein 4 isoform X2 [Cucumis melo var. makuwa]2.5e-3262.61Show/hide
Query:  HKRKKKEEGTEISEIDLFQITHSNEKKGWVNEAKTKYDEMMALKTASSQEGSEPLLDKEICEQVLGKRPGHVKVLGWVPRPRNARNEASYQTAKETKAEI
        H   +KEEG E+SEI+LFQ+THSNEK GWVNEAK KYDEM+ LKT SSQE SEPLL++EIC++VLGKR GHVK  GW PRP+NARNE      KE  A+I
Subjt:  HKRKKKEEGTEISEIDLFQITHSNEKKGWVNEAKTKYDEMMALKTASSQEGSEPLLDKEICEQVLGKRPGHVKVLGWVPRPRNARNEASYQTAKETKAEI

Query:  AHLQRLLHRNKLQLK
        AHLQ ++   +  ++
Subjt:  AHLQRLLHRNKLQLK

KAE8651942.1 hypothetical protein Csa_006405 [Cucumis sativus]1.1e-4571.01Show/hide
Query:  RWEREDFKRISEATTKARAALPFTHRGGTATFLRHKRKKKEEGTEISEIDLFQITHSNEKKGWVNEAKTKYDEMMALKTASSQEGSEPLLDKEICEQVLG
        RWERE FK  SEA TKAR+ LPFTHRGGT TFLRHK+K KEEG EIS I+LFQ THS+EKK WV+EAK KYDEM+ LKT  SQEGS+ LL+KEICE+VL 
Subjt:  RWEREDFKRISEATTKARAALPFTHRGGTATFLRHKRKKKEEGTEISEIDLFQITHSNEKKGWVNEAKTKYDEMMALKTASSQEGSEPLLDKEICEQVLG

Query:  KRPGHVKVLGWVPRPRNARNEASYQTAKETKAEIAHLQ
        KR G VK  GW PRP+NARNEA  Q+ K+  A+IAHLQ
Subjt:  KRPGHVKVLGWVPRPRNARNEASYQTAKETKAEIAHLQ

TYK04806.1 formin-like protein 4 isoform X2 [Cucumis melo var. makuwa]2.5e-3261.74Show/hide
Query:  HKRKKKEEGTEISEIDLFQITHSNEKKGWVNEAKTKYDEMMALKTASSQEGSEPLLDKEICEQVLGKRPGHVKVLGWVPRPRNARNEASYQTAKETKAEI
        H   +KEEG E+SEI+LFQ+THSNEK GWVNEAK KYDEM+ LKT SSQEGSEPLL+++IC++VLGKR GHVK  GW PRP+NARNE      K+  A+I
Subjt:  HKRKKKEEGTEISEIDLFQITHSNEKKGWVNEAKTKYDEMMALKTASSQEGSEPLLDKEICEQVLGKRPGHVKVLGWVPRPRNARNEASYQTAKETKAEI

Query:  AHLQRLLHRNKLQLK
        AHLQ ++   +  ++
Subjt:  AHLQRLLHRNKLQLK

TYK21104.1 formin-like protein 4 isoform X2 [Cucumis melo var. makuwa]2.9e-3363.48Show/hide
Query:  HKRKKKEEGTEISEIDLFQITHSNEKKGWVNEAKTKYDEMMALKTASSQEGSEPLLDKEICEQVLGKRPGHVKVLGWVPRPRNARNEASYQTAKETKAEI
        H   +KEEG E+SEI+LFQ+THSNEK GWVNEAK KYDEM+ LKT SSQEGSEPLL++EIC++VLGKR GHVK  GW PRP+NARNE      KE  A+I
Subjt:  HKRKKKEEGTEISEIDLFQITHSNEKKGWVNEAKTKYDEMMALKTASSQEGSEPLLDKEICEQVLGKRPGHVKVLGWVPRPRNARNEASYQTAKETKAEI

Query:  AHLQRLLHRNKLQLK
        AHLQ ++   +  ++
Subjt:  AHLQRLLHRNKLQLK

TrEMBL top hitse value%identityAlignment
A0A5A7TVR8 Formin-like protein 4 isoform X21.2e-3261.74Show/hide
Query:  HKRKKKEEGTEISEIDLFQITHSNEKKGWVNEAKTKYDEMMALKTASSQEGSEPLLDKEICEQVLGKRPGHVKVLGWVPRPRNARNEASYQTAKETKAEI
        H   +KEEG E+SEI+LFQ+THSNEK GWVNEAK KYDEM+ LKT SSQEGSEPLL+++IC++VLGKR GHVK  GW PRP+NARNE      K+  A+I
Subjt:  HKRKKKEEGTEISEIDLFQITHSNEKKGWVNEAKTKYDEMMALKTASSQEGSEPLLDKEICEQVLGKRPGHVKVLGWVPRPRNARNEASYQTAKETKAEI

Query:  AHLQRLLHRNKLQLK
        AHLQ ++   +  ++
Subjt:  AHLQRLLHRNKLQLK

A0A5A7VIL7 Formin-like protein 4 isoform X21.2e-3262.61Show/hide
Query:  HKRKKKEEGTEISEIDLFQITHSNEKKGWVNEAKTKYDEMMALKTASSQEGSEPLLDKEICEQVLGKRPGHVKVLGWVPRPRNARNEASYQTAKETKAEI
        H   +KEEG E+SEI+LFQ+THSNEK GWVNEAK KYDEM+ LKT SSQE SEPLL++EIC++VLGKR GHVK  GW PRP+NARNE      KE  A+I
Subjt:  HKRKKKEEGTEISEIDLFQITHSNEKKGWVNEAKTKYDEMMALKTASSQEGSEPLLDKEICEQVLGKRPGHVKVLGWVPRPRNARNEASYQTAKETKAEI

Query:  AHLQRLLHRNKLQLK
        AHLQ ++   +  ++
Subjt:  AHLQRLLHRNKLQLK

A0A5D3C2Z5 Formin-like protein 4 isoform X21.2e-3261.74Show/hide
Query:  HKRKKKEEGTEISEIDLFQITHSNEKKGWVNEAKTKYDEMMALKTASSQEGSEPLLDKEICEQVLGKRPGHVKVLGWVPRPRNARNEASYQTAKETKAEI
        H   +KEEG E+SEI+LFQ+THSNEK GWVNEAK KYDEM+ LKT SSQEGSEPLL+++IC++VLGKR GHVK  GW PRP+NARNE      K+  A+I
Subjt:  HKRKKKEEGTEISEIDLFQITHSNEKKGWVNEAKTKYDEMMALKTASSQEGSEPLLDKEICEQVLGKRPGHVKVLGWVPRPRNARNEASYQTAKETKAEI

Query:  AHLQRLLHRNKLQLK
        AHLQ ++   +  ++
Subjt:  AHLQRLLHRNKLQLK

A0A5D3D027 Formin-like protein 4 isoform X25.9e-3267.31Show/hide
Query:  HKRKKKEEGTEISEIDLFQITHSNEKKGWVNEAKTKYDEMMALKTASSQEGSEPLLDKEICEQVLGKRPGHVKVLGWVPRPRNARNEASYQTAKETKAEI
        H   +KEEG E+SEI LFQ+THSN+KKGWVN+ K KYDEM+ L+T SSQEGSEPLL++EICE+VLGKR GHVK  GW PRP+NARNE+     KE   +I
Subjt:  HKRKKKEEGTEISEIDLFQITHSNEKKGWVNEAKTKYDEMMALKTASSQEGSEPLLDKEICEQVLGKRPGHVKVLGWVPRPRNARNEASYQTAKETKAEI

Query:  AHLQ
        AHLQ
Subjt:  AHLQ

A0A5D3DBZ5 Formin-like protein 4 isoform X21.4e-3363.48Show/hide
Query:  HKRKKKEEGTEISEIDLFQITHSNEKKGWVNEAKTKYDEMMALKTASSQEGSEPLLDKEICEQVLGKRPGHVKVLGWVPRPRNARNEASYQTAKETKAEI
        H   +KEEG E+SEI+LFQ+THSNEK GWVNEAK KYDEM+ LKT SSQEGSEPLL++EIC++VLGKR GHVK  GW PRP+NARNE      KE  A+I
Subjt:  HKRKKKEEGTEISEIDLFQITHSNEKKGWVNEAKTKYDEMMALKTASSQEGSEPLLDKEICEQVLGKRPGHVKVLGWVPRPRNARNEASYQTAKETKAEI

Query:  AHLQRLLHRNKLQLK
        AHLQ ++   +  ++
Subjt:  AHLQRLLHRNKLQLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATCGATGGGAAAGAGAGGACTTTAAGCGTATTTCTGAAGCAACTACCAAGGCTCGGGCTGCTCTTCCATTCACTCATAGAGGTGGGACTGCGACATTTTTACGTCA
TAAGCGGAAAAAGAAAGAAGAGGGTACGGAGATAAGTGAGATTGACTTATTTCAGATCACACATTCTAATGAAAAGAAAGGGTGGGTGAATGAGGCAAAAACGAAATATG
ATGAAATGATGGCATTAAAAACTGCTTCATCCCAAGAAGGGAGTGAACCTCTTCTGGATAAGGAAATATGTGAACAAGTGTTGGGTAAGAGGCCGGGGCACGTGAAAGTA
CTTGGTTGGGTACCAAGACCAAGAAATGCTAGAAATGAAGCAAGTTACCAAACTGCAAAAGAAACAAAAGCGGAGATTGCACATTTGCAAAGATTGTTGCATCGCAACAA
GCTACAATTGAAGAAATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATCGATGGGAAAGAGAGGACTTTAAGCGTATTTCTGAAGCAACTACCAAGGCTCGGGCTGCTCTTCCATTCACTCATAGAGGTGGGACTGCGACATTTTTACGTCA
TAAGCGGAAAAAGAAAGAAGAGGGTACGGAGATAAGTGAGATTGACTTATTTCAGATCACACATTCTAATGAAAAGAAAGGGTGGGTGAATGAGGCAAAAACGAAATATG
ATGAAATGATGGCATTAAAAACTGCTTCATCCCAAGAAGGGAGTGAACCTCTTCTGGATAAGGAAATATGTGAACAAGTGTTGGGTAAGAGGCCGGGGCACGTGAAAGTA
CTTGGTTGGGTACCAAGACCAAGAAATGCTAGAAATGAAGCAAGTTACCAAACTGCAAAAGAAACAAAAGCGGAGATTGCACATTTGCAAAGATTGTTGCATCGCAACAA
GCTACAATTGAAGAAATTTTAA
Protein sequenceShow/hide protein sequence
MYRWEREDFKRISEATTKARAALPFTHRGGTATFLRHKRKKKEEGTEISEIDLFQITHSNEKKGWVNEAKTKYDEMMALKTASSQEGSEPLLDKEICEQVLGKRPGHVKV
LGWVPRPRNARNEASYQTAKETKAEIAHLQRLLHRNKLQLKKF