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HG10003993 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003993
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiondormancy-associated protein 2-like isoform X2
Genome locationChr08:12546683..12547771
RNA-Seq ExpressionHG10003993
SyntenyHG10003993
Gene Ontology termsGO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578909.1 hypothetical protein SDJN03_23357, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3380Show/hide
Query:  MAISKAAGVMAMAAFLALFLLISTANVAAALPYESMIPQEFALGRKVLEEKYEATGRSGYNKYEPNGRSGYNKYEPNGRSGYNKNEPNGRSGYNGNKPTG
        MA SKAAGVM MAAFLA+FLLIST NV AAL YES++PQEFALGRKVLE+KYEA GRSGYN  EPNGRSGYN  E NGRSGYN NEPNGRSGYN N+  G
Subjt:  MAISKAAGVMAMAAFLALFLLISTANVAAALPYESMIPQEFALGRKVLEEKYEATGRSGYNKYEPNGRSGYNKYEPNGRSGYNKNEPNGRSGYNGNKPTG

Query:  RGGYN
        R GYN
Subjt:  RGGYN
KAG7016430.1 hypothetical protein SDJN02_21539, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3480.95Show/hide
Query:  MAISKAAGVMAMAAFLALFLLISTANVAAALPYESMIPQEFALGRKVLEEKYEATGRSGYNKYEPNGRSGYNKYEPNGRSGYNKNEPNGRSGYNGNKPTG
        MA SKAAGVM MAAFLA+FLLIST NV AAL YES++PQEFALG KVLE+KYEA GRSGYN  EPNGRSGYN  EPNGRSGYN NEPNGRSGYN N+P G
Subjt:  MAISKAAGVMAMAAFLALFLLISTANVAAALPYESMIPQEFALGRKVLEEKYEATGRSGYNKYEPNGRSGYNKYEPNGRSGYNKNEPNGRSGYNGNKPTG

Query:  RGGYN
        R GYN
Subjt:  RGGYN
XP_022939478.1 N66 matrix protein-like isoform X1 [Cucurbita moschata]2.2e-3278.1Show/hide
Query:  MAISKAAGVMAMAAFLALFLLISTANVAAALPYESMIPQEFALGRKVLEEKYEATGRSGYNKYEPNGRSGYNKYEPNGRSGYNKNEPNGRSGYNGNKPTG
        MA SKAAGVM MAAFLA+FLLIS  NV AAL YES++PQEFALGRKVLE+KYEA GRSGYN  +PNGRSG N  EPNGRS YN NEPNGRSGYN N+P G
Subjt:  MAISKAAGVMAMAAFLALFLLISTANVAAALPYESMIPQEFALGRKVLEEKYEATGRSGYNKYEPNGRSGYNKYEPNGRSGYNKNEPNGRSGYNGNKPTG

Query:  RGGYN
        R GYN
Subjt:  RGGYN
XP_022939479.1 dormancy-associated protein 2-like isoform X2 [Cucurbita moschata]4.4e-3379.05Show/hide
Query:  MAISKAAGVMAMAAFLALFLLISTANVAAALPYESMIPQEFALGRKVLEEKYEATGRSGYNKYEPNGRSGYNKYEPNGRSGYNKNEPNGRSGYNGNKPTG
        MA SKAAGVM MAAFLA+FLLIS  NV AAL YES++PQEFALGRKVLE+KYEA GRSGYN  EPNGRSGYN  EPNGRSGYN +EPNGRSGYN N+  G
Subjt:  MAISKAAGVMAMAAFLALFLLISTANVAAALPYESMIPQEFALGRKVLEEKYEATGRSGYNKYEPNGRSGYNKYEPNGRSGYNKNEPNGRSGYNGNKPTG

Query:  RGGYN
        R GYN
Subjt:  RGGYN
XP_022993935.1 P granule abnormality protein 1-like [Cucurbita maxima]3.1e-3480Show/hide
Query:  MAISKAAGVMAMAAFLALFLLISTANVAAALPYESMIPQEFALGRKVLEEKYEATGRSGYNKYEPNGRSGYNKYEPNGRSGYNKNEPNGRSGYNGNKPTG
        MA SKAAGVM MAAFLA+FLLIST  VAAAL YES+IPQEFALGRKVLE+KYEA GRSGYN  EP GR GYN YEPNGRSGYN NEP+GR GYN N+P G
Subjt:  MAISKAAGVMAMAAFLALFLLISTANVAAALPYESMIPQEFALGRKVLEEKYEATGRSGYNKYEPNGRSGYNKYEPNGRSGYNKNEPNGRSGYNGNKPTG

Query:  RGGYN
        R GYN
Subjt:  RGGYN
TrEMBL top hitse value%identityAlignment
A0A0E0JUX0 Uncharacterized protein1.8e-0870Show/hide
Query:  GRSGYNKYEPNGRSGYNKYEPNGRSGYNKNEPNGRSGYNGNKPTGRGGYN
        GRSGYN   PNGRSGYN   P+GRSGYN   PNGRSGYN   P GR GYN
Subjt:  GRSGYNKYEPNGRSGYNKYEPNGRSGYNKNEPNGRSGYNGNKPTGRGGYN
A0A0E0JUX1 Uncharacterized protein6.3e-0972Show/hide
Query:  GRSGYNKYEPNGRSGYNKYEPNGRSGYNKNEPNGRSGYNGNKPTGRGGYN
        GRSGYN   PNGRSGYN   PNGRSGYN   PNGRSGYN   P GR GYN
Subjt:  GRSGYNKYEPNGRSGYNKYEPNGRSGYNKNEPNGRSGYNGNKPTGRGGYN
A0A6J1FHA4 dormancy-associated protein 2-like isoform X22.1e-3379.05Show/hide
Query:  MAISKAAGVMAMAAFLALFLLISTANVAAALPYESMIPQEFALGRKVLEEKYEATGRSGYNKYEPNGRSGYNKYEPNGRSGYNKNEPNGRSGYNGNKPTG
        MA SKAAGVM MAAFLA+FLLIS  NV AAL YES++PQEFALGRKVLE+KYEA GRSGYN  EPNGRSGYN  EPNGRSGYN +EPNGRSGYN N+  G
Subjt:  MAISKAAGVMAMAAFLALFLLISTANVAAALPYESMIPQEFALGRKVLEEKYEATGRSGYNKYEPNGRSGYNKYEPNGRSGYNKNEPNGRSGYNGNKPTG

Query:  RGGYN
        R GYN
Subjt:  RGGYN
A0A6J1FLR8 N66 matrix protein-like isoform X11.1e-3278.1Show/hide
Query:  MAISKAAGVMAMAAFLALFLLISTANVAAALPYESMIPQEFALGRKVLEEKYEATGRSGYNKYEPNGRSGYNKYEPNGRSGYNKNEPNGRSGYNGNKPTG
        MA SKAAGVM MAAFLA+FLLIS  NV AAL YES++PQEFALGRKVLE+KYEA GRSGYN  +PNGRSG N  EPNGRS YN NEPNGRSGYN N+P G
Subjt:  MAISKAAGVMAMAAFLALFLLISTANVAAALPYESMIPQEFALGRKVLEEKYEATGRSGYNKYEPNGRSGYNKYEPNGRSGYNKNEPNGRSGYNGNKPTG

Query:  RGGYN
        R GYN
Subjt:  RGGYN
A0A6J1JZW6 P granule abnormality protein 1-like1.5e-3480Show/hide
Query:  MAISKAAGVMAMAAFLALFLLISTANVAAALPYESMIPQEFALGRKVLEEKYEATGRSGYNKYEPNGRSGYNKYEPNGRSGYNKNEPNGRSGYNGNKPTG
        MA SKAAGVM MAAFLA+FLLIST  VAAAL YES+IPQEFALGRKVLE+KYEA GRSGYN  EP GR GYN YEPNGRSGYN NEP+GR GYN N+P G
Subjt:  MAISKAAGVMAMAAFLALFLLISTANVAAALPYESMIPQEFALGRKVLEEKYEATGRSGYNKYEPNGRSGYNKYEPNGRSGYNKNEPNGRSGYNGNKPTG

Query:  RGGYN
        R GYN
Subjt:  RGGYN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATCTCTAAGGCTGCTGGAGTCATGGCCATGGCCGCGTTCCTTGCCCTCTTCCTCCTCATATCCACCGCCAACGTAGCAGCCGCTCTGCCCTACGAGTCGATGAT
ACCGCAAGAATTTGCTCTTGGACGAAAGGTTCTTGAGGAGAAATATGAAGCAACAGGTAGAAGTGGATATAACAAATATGAACCCAATGGCAGAAGTGGATATAACAAAT
ATGAACCCAATGGCAGAAGTGGATATAACAAAAATGAACCCAATGGCAGGAGTGGCTACAATGGCAACAAGCCCACAGGAAGGGGAGGATATAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATCTCTAAGGCTGCTGGAGTCATGGCCATGGCCGCGTTCCTTGCCCTCTTCCTCCTCATATCCACCGCCAACGTAGCAGCCGCTCTGCCCTACGAGTCGATGAT
ACCGCAAGAATTTGCTCTTGGACGAAAGGTTCTTGAGGAGAAATATGAAGCAACAGGTAGAAGTGGATATAACAAATATGAACCCAATGGCAGAAGTGGATATAACAAAT
ATGAACCCAATGGCAGAAGTGGATATAACAAAAATGAACCCAATGGCAGGAGTGGCTACAATGGCAACAAGCCCACAGGAAGGGGAGGATATAATTAA
Protein sequenceShow/hide protein sequence
MAISKAAGVMAMAAFLALFLLISTANVAAALPYESMIPQEFALGRKVLEEKYEATGRSGYNKYEPNGRSGYNKYEPNGRSGYNKNEPNGRSGYNGNKPTGRGGYN