; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003995 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003995
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionVQ domain-containing protein
Genome locationChr08:12565281..12565793
RNA-Seq ExpressionHG10003995
SyntenyHG10003995
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR008889 - VQ
IPR039607 - VQ motif-containing protein 8/17/18/20/21/25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058915.1 protein MKS1-like [Cucumis melo var. makuwa]1.2e-5168.54Show/hide
Query:  MPERKDVQLQGPRPAALKITKDSHKIKKPPLPP--PHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCR---PSSSNDAL--DHPSDTTISSMSMSMPMST
        MPE+K++QLQGPRP+ALKITKDSHKIKKPPLPP  PHRPVIIYTVSPKIIHT+PT+FKDLVQRLTG      SSSN AL  DHP    IS          
Subjt:  MPERKDVQLQGPRPAALKITKDSHKIKKPPLPP--PHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCR---PSSSNDAL--DHPSDTTISSMSMSMPMST

Query:  DQGVER-VGHGILSPTPGLLPPISPNIFTPPPLPPQTTMPAVADLSPFTHFFQDLSPIATNHFSSSLDFFQQNFPDFH
          GV+R + HGILSPTPGLLPPISP IF+ P  PPQ    A  DL+  T FF DLSPI  NHFS SLDFFQQNFPDFH
Subjt:  DQGVER-VGHGILSPTPGLLPPISPNIFTPPPLPPQTTMPAVADLSPFTHFFQDLSPIATNHFSSSLDFFQQNFPDFH

KAG6578908.1 Protein MKS1, partial [Cucurbita argyrosperma subsp. sororia]6.5e-5070.18Show/hide
Query:  MPERKDVQLQGPRPAALKITKDSHKIKKPPLPPPHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCRPSSSNDALDHPSDTTISSMSMSMPMSTD-QGVER
        M ERK++QLQGPRPAALKITKDSHKI K    PPHRPVIIYTVSPK+IHT+PT+FKDLVQRLTG +PSS +    HP +TT       M MST+ QG ER
Subjt:  MPERKDVQLQGPRPAALKITKDSHKIKKPPLPPPHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCRPSSSNDALDHPSDTTISSMSMSMPMSTD-QGVER

Query:  VGHGILSPTPGLLPPISPNIFTPPPLPPQTTMPAVADLSPFTHFFQDLSPIATNHFSSSLDFFQQNFPDFH
        VGHGILSPTPGLLPPI  NIFTP P       P  A+LSP THFF+DLSPIA N FSSSLDFF QNFPD H
Subjt:  VGHGILSPTPGLLPPISPNIFTPPPLPPQTTMPAVADLSPFTHFFQDLSPIATNHFSSSLDFFQQNFPDFH

XP_004148825.1 protein MKS1 [Cucumis sativus]2.8e-5369.27Show/hide
Query:  MPERKDVQLQGPRPAALKITKDSHKIKKPPLPP--PHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCR---PSSSNDAL---DHPSDTTISSMSMSMPMS
        MPE+K++QLQGPRP+ALKITKDSHKIKKPPLPP  PHRPVIIYTVSPKIIHT+PTEFKDLVQRLTG      SSSN AL    HP    IS  +   P+ 
Subjt:  MPERKDVQLQGPRPAALKITKDSHKIKKPPLPP--PHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCR---PSSSNDAL---DHPSDTTISSMSMSMPMS

Query:  TDQGVER-VGHGILSPTPGLLPPISPNIFTPPPLPPQTTMPAVADLSPFTHFFQDLSPIATNHFSSSLDFFQQNFPDFH
           GV+R + HGILSPTPGLLPPIS  IF PPP  P     A  DL+  T FF DLSPIA NHFSSSLDFFQQNFPDFH
Subjt:  TDQGVER-VGHGILSPTPGLLPPISPNIFTPPPLPPQTTMPAVADLSPFTHFFQDLSPIATNHFSSSLDFFQQNFPDFH

XP_023551504.1 protein MKS1-like [Cucurbita pepo subsp. pepo]1.4e-4969.41Show/hide
Query:  MPERKDVQLQGPRPAALKITKDSHKIKKPPLPPPHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCRPSSSNDALDHPSDTTISSMSMSMPMSTDQGVERV
        M ERK+VQLQGPRPAALKITKDSHKI K    PPHRPVIIYTVSPK+IHT+PT+FKDLVQRLTG +P SS+D+   P+ T I S       +  QG ERV
Subjt:  MPERKDVQLQGPRPAALKITKDSHKIKKPPLPPPHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCRPSSSNDALDHPSDTTISSMSMSMPMSTDQGVERV

Query:  GHGILSPTPGLLPPISPNIFTPPPLPPQTTMPAVADLSPFTHFFQDLSPIATNHFSSSLDFFQQNFPDFH
        GHGILSPTPGLLPPI  NIFTP P       P  A+LSP THFF+DLSPIA N FSSSLDFF QNFPD H
Subjt:  GHGILSPTPGLLPPISPNIFTPPPLPPQTTMPAVADLSPFTHFFQDLSPIATNHFSSSLDFFQQNFPDFH

XP_038885910.1 protein MKS1-like [Benincasa hispida]3.4e-6783.52Show/hide
Query:  MPERKDVQLQGPRPAALKITKDSHKIKKPPL----PPPHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCRPSSSNDALDHPSDTTISSMSMSM-PMSTDQ
        MPERK+V LQGPRPAALKITKDSHKIKKPPL    PPPHRPVIIYTVSPKIIHTEPTEFKDLVQRLTG RPSSSNDALDHP     +SMSMSM   S DQ
Subjt:  MPERKDVQLQGPRPAALKITKDSHKIKKPPL----PPPHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCRPSSSNDALDHPSDTTISSMSMSM-PMSTDQ

Query:  GVERVGHGILSPTPGLLPPISPNIFTPPPLPPQTTMPAVA-DLSPFTHFFQDLSPIATNHFSSSLDFFQQNFPDFH
        GVERVGHGILSPTPGLLPPIS NIFTP   PPQ  M A A D SPFT FFQD SPIATNHFSSSLDFFQQNFPDFH
Subjt:  GVERVGHGILSPTPGLLPPISPNIFTPPPLPPQTTMPAVA-DLSPFTHFFQDLSPIATNHFSSSLDFFQQNFPDFH

TrEMBL top hitse value%identityAlignment
A0A0A0KI80 VQ domain-containing protein1.4e-5369.27Show/hide
Query:  MPERKDVQLQGPRPAALKITKDSHKIKKPPLPP--PHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCR---PSSSNDAL---DHPSDTTISSMSMSMPMS
        MPE+K++QLQGPRP+ALKITKDSHKIKKPPLPP  PHRPVIIYTVSPKIIHT+PTEFKDLVQRLTG      SSSN AL    HP    IS  +   P+ 
Subjt:  MPERKDVQLQGPRPAALKITKDSHKIKKPPLPP--PHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCR---PSSSNDAL---DHPSDTTISSMSMSMPMS

Query:  TDQGVER-VGHGILSPTPGLLPPISPNIFTPPPLPPQTTMPAVADLSPFTHFFQDLSPIATNHFSSSLDFFQQNFPDFH
           GV+R + HGILSPTPGLLPPIS  IF PPP  P     A  DL+  T FF DLSPIA NHFSSSLDFFQQNFPDFH
Subjt:  TDQGVER-VGHGILSPTPGLLPPISPNIFTPPPLPPQTTMPAVADLSPFTHFFQDLSPIATNHFSSSLDFFQQNFPDFH

A0A1S3B4N1 protein MKS1-like1.6e-4967.05Show/hide
Query:  ERKDVQLQGPRPAALKITKDSHKIKKPPLPP--PHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCR---PSSSNDAL--DHPSDTTISSMSMSMPMSTDQ
        +++ +QLQGPRP+ALKITKDSHKIKKPPLPP  PHRPVIIYTVSPKIIHT+PT+FKDLVQRLTG      SSSN AL  DHP    IS            
Subjt:  ERKDVQLQGPRPAALKITKDSHKIKKPPLPP--PHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCR---PSSSNDAL--DHPSDTTISSMSMSMPMSTDQ

Query:  GVER-VGHGILSPTPGLLPPISPNIFTPPPLPPQTTMPAVADLSPFTHFFQDLSPIATNHFSSSLDFFQQNFPDFH
        GV+R + HGILSPTPGLLPPISP IF+ P  PPQ    A  DL+  T FF DLSPI  NHFS SLDFFQQNFPDFH
Subjt:  GVER-VGHGILSPTPGLLPPISPNIFTPPPLPPQTTMPAVADLSPFTHFFQDLSPIATNHFSSSLDFFQQNFPDFH

A0A5A7UZA1 Protein MKS1-like5.7e-5268.54Show/hide
Query:  MPERKDVQLQGPRPAALKITKDSHKIKKPPLPP--PHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCR---PSSSNDAL--DHPSDTTISSMSMSMPMST
        MPE+K++QLQGPRP+ALKITKDSHKIKKPPLPP  PHRPVIIYTVSPKIIHT+PT+FKDLVQRLTG      SSSN AL  DHP    IS          
Subjt:  MPERKDVQLQGPRPAALKITKDSHKIKKPPLPP--PHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCR---PSSSNDAL--DHPSDTTISSMSMSMPMST

Query:  DQGVER-VGHGILSPTPGLLPPISPNIFTPPPLPPQTTMPAVADLSPFTHFFQDLSPIATNHFSSSLDFFQQNFPDFH
          GV+R + HGILSPTPGLLPPISP IF+ P  PPQ    A  DL+  T FF DLSPI  NHFS SLDFFQQNFPDFH
Subjt:  DQGVER-VGHGILSPTPGLLPPISPNIFTPPPLPPQTTMPAVADLSPFTHFFQDLSPIATNHFSSSLDFFQQNFPDFH

A0A6J1FKV1 protein MKS1-like1.6e-4969.59Show/hide
Query:  MPERKDVQLQGPRPAALKITKDSHKIKKPPLPPPHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCRPSSSNDALDHPSDTTISSMSMSMPMSTD-QGVER
        M ERK++QLQGPRPAALKITKDSHKI K    PPHRPVIIYTVSPK+IHT+PT+FKDLVQRLTG +PSS +    HP +TT       M MST+ QG ER
Subjt:  MPERKDVQLQGPRPAALKITKDSHKIKKPPLPPPHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCRPSSSNDALDHPSDTTISSMSMSMPMSTD-QGVER

Query:  VGHGILSPTPGLLPPISPNIFTPPPLPPQTTMPAVADLSPFTHFFQDLSPIATNHFSSSLDFFQQNFPDFH
        VGHGILSPTPGLLPPI  NIFTP P       P  A+LSP THFF+DLSPIA N FS SLDFF QNFPD H
Subjt:  VGHGILSPTPGLLPPISPNIFTPPPLPPQTTMPAVADLSPFTHFFQDLSPIATNHFSSSLDFFQQNFPDFH

A0A6J1JW33 protein MKS1-like7.7e-4969.01Show/hide
Query:  MPERKDVQLQGPRPAALKITKDSHKIKKPPLPPPHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCRPSSSNDALDHPSDTTISSMSMSMPMSTD-QGVER
        M ERK+VQLQGPRPAALKITKDSHKI K    PPHRPVIIY+VSPK+IHT+PT+FKDLVQRLTG +PSS +    HP +TT       M MST+  G ER
Subjt:  MPERKDVQLQGPRPAALKITKDSHKIKKPPLPPPHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCRPSSSNDALDHPSDTTISSMSMSMPMSTD-QGVER

Query:  VGHGILSPTPGLLPPISPNIFTPPPLPPQTTMPAVADLSPFTHFFQDLSPIATNHFSSSLDFFQQNFPDFH
        VGHGILSPTPGLLPPI  NIFTP P       P  A+LSP THFF+DLSPIA N FS SLDFF QNFPD H
Subjt:  VGHGILSPTPGLLPPISPNIFTPPPLPPQTTMPAVADLSPFTHFFQDLSPIATNHFSSSLDFFQQNFPDFH

SwissProt top hitse value%identityAlignment
F4HWF9 Nuclear speckle RNA-binding protein B7.2e-1242.37Show/hide
Query:  GPRPAALKITKDSHK-IKKPPLPPPH--------------------RPVIIYTVSPKIIHTEPTEFKDLVQRLTGCRPSSSNDALDHPSDTTISSMSMSM
        GP+P  LK+  DSHK IKKPPL PPH                     PV IYTV+P+IIHT P  F  LVQRLTG   +S+         ++ SS S S 
Subjt:  GPRPAALKITKDSHK-IKKPPLPPPH--------------------RPVIIYTVSPKIIHTEPTEFKDLVQRLTGCRPSSSNDALDHPSDTTISSMSMSM

Query:  PMSTDQGVERVGHGILSP
        P  T   V+   HG++SP
Subjt:  PMSTDQGVERVGHGILSP

Q8LGD5 Protein MKS12.9e-1335.36Show/hide
Query:  ERKDVQLQGPRPAALKITKDSHKIKKP---PLPPPHR----------PVIIYTVSPKIIHTEPTEFKDLVQRLTGCRP---------SSSNDALDHPSDT
        +++ +Q+ GPRP+ L + KDSHKIKKP   P PPP+R          PV+IY VSPK++H   +EF ++VQRLTG               + A    S  
Subjt:  ERKDVQLQGPRPAALKITKDSHKIKKP---PLPPPHR----------PVIIYTVSPKIIHTEPTEFKDLVQRLTGCRP---------SSSNDALDHPSDT

Query:  TISSMSMSMPMSTDQGVE------------RVGHGILSPTPGLLPPISPNIFTP---------PPLPPQTTMPAVADLSPF
          S      P + D+ VE                GILSP+P LLP  S  IF+P         P +P     PA   +SPF
Subjt:  TISSMSMSMPMSTDQGVE------------RVGHGILSPTPGLLPPISPNIFTP---------PPLPPQTTMPAVADLSPF

Q9CA36 VQ motif-containing protein 8, chloroplastic1.3e-0535.16Show/hide
Query:  QLQGPRPAALKITKDSHKIKK----PPLPPPH---RPVIIYTVSPKIIHTEPTEFKDLVQRLTGC-----RPSSSNDALDHPSDTTISSMSMSMPMSTDQ
        ++ G RP++LK+  +SH IKK       P PH    PVIIY  SPK+IHT   +F  LVQRLTG      R +S + +     +  +   + + P S D 
Subjt:  QLQGPRPAALKITKDSHKIKK----PPLPPPH---RPVIIYTVSPKIIHTEPTEFKDLVQRLTGC-----RPSSSNDALDHPSDTTISSMSMSMPMSTDQ

Query:  GVERVGHGILSPTPGLLPPISPNIFTPP
           R     L+  P L  P S  +F  P
Subjt:  GVERVGHGILSPTPGLLPPISPNIFTPP

Q9LS54 VQ motif-containing protein 208.9e-1052.24Show/hide
Query:  PRPAALKITKDSHKIKKPPLP-------PPHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCRPSSSN
        P P  LK+ KDSH IKKPP P        P  PVIIYT +P+IIHT P +F  LVQ+LTG   S  +
Subjt:  PRPAALKITKDSHKIKKPPLP-------PPHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCRPSSSN

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding5.1e-1342.37Show/hide
Query:  GPRPAALKITKDSHK-IKKPPLPPPH--------------------RPVIIYTVSPKIIHTEPTEFKDLVQRLTGCRPSSSNDALDHPSDTTISSMSMSM
        GP+P  LK+  DSHK IKKPPL PPH                     PV IYTV+P+IIHT P  F  LVQRLTG   +S+         ++ SS S S 
Subjt:  GPRPAALKITKDSHK-IKKPPLPPPH--------------------RPVIIYTVSPKIIHTEPTEFKDLVQRLTGCRPSSSNDALDHPSDTTISSMSMSM

Query:  PMSTDQGVERVGHGILSP
        P  T   V+   HG++SP
Subjt:  PMSTDQGVERVGHGILSP

AT1G21326.1 VQ motif-containing protein4.4e-1232.2Show/hide
Query:  GPRPAALKITKDSHK-IKKPPLPPPH--------------------RPVIIYTVSPKIIHTEPTEFKDLVQRLTGCRPSSSNDALDHPSDTTISSMSMSM
        GPRP  LK+  DSHK IKKPPL PPH                     PVIIYTVSP+IIHT P  F  LVQRLTG + S+S  +  + S T+    + +M
Subjt:  GPRPAALKITKDSHK-IKKPPLPPPH--------------------RPVIIYTVSPKIIHTEPTEFKDLVQRLTGCRPSSSNDALDHPSDTTISSMSMSM

Query:  --------------------------------------------------PMSTDQGVERVGH---GILSPTPGLLPPISPNIF-TPPPLPPQTTMPAVA
                                                              +QG ER      GILSP P  LP +SP+ F T  P  PQ       
Subjt:  --------------------------------------------------PMSTDQGVERVGH---GILSPTPGLLPPISPNIF-TPPPLPPQTTMPAVA

Query:  DLSPFTHFFQDLSPIATNHFS-----SSLDFFQQNF
            F+ FF D + I  +  S     SS+D F   F
Subjt:  DLSPFTHFFQDLSPIATNHFS-----SSLDFFQQNF

AT1G68450.1 VQ motif-containing protein9.4e-0735.16Show/hide
Query:  QLQGPRPAALKITKDSHKIKK----PPLPPPH---RPVIIYTVSPKIIHTEPTEFKDLVQRLTGC-----RPSSSNDALDHPSDTTISSMSMSMPMSTDQ
        ++ G RP++LK+  +SH IKK       P PH    PVIIY  SPK+IHT   +F  LVQRLTG      R +S + +     +  +   + + P S D 
Subjt:  QLQGPRPAALKITKDSHKIKK----PPLPPPH---RPVIIYTVSPKIIHTEPTEFKDLVQRLTGC-----RPSSSNDALDHPSDTTISSMSMSMPMSTDQ

Query:  GVERVGHGILSPTPGLLPPISPNIFTPP
           R     L+  P L  P S  +F  P
Subjt:  GVERVGHGILSPTPGLLPPISPNIFTPP

AT3G18360.1 VQ motif-containing protein6.3e-1152.24Show/hide
Query:  PRPAALKITKDSHKIKKPPLP-------PPHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCRPSSSN
        P P  LK+ KDSH IKKPP P        P  PVIIYT +P+IIHT P +F  LVQ+LTG   S  +
Subjt:  PRPAALKITKDSHKIKKPPLP-------PPHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCRPSSSN

AT3G18690.1 MAP kinase substrate 12.1e-1435.36Show/hide
Query:  ERKDVQLQGPRPAALKITKDSHKIKKP---PLPPPHR----------PVIIYTVSPKIIHTEPTEFKDLVQRLTGCRP---------SSSNDALDHPSDT
        +++ +Q+ GPRP+ L + KDSHKIKKP   P PPP+R          PV+IY VSPK++H   +EF ++VQRLTG               + A    S  
Subjt:  ERKDVQLQGPRPAALKITKDSHKIKKP---PLPPPHR----------PVIIYTVSPKIIHTEPTEFKDLVQRLTGCRP---------SSSNDALDHPSDT

Query:  TISSMSMSMPMSTDQGVE------------RVGHGILSPTPGLLPPISPNIFTP---------PPLPPQTTMPAVADLSPF
          S      P + D+ VE                GILSP+P LLP  S  IF+P         P +P     PA   +SPF
Subjt:  TISSMSMSMPMSTDQGVE------------RVGHGILSPTPGLLPPISPNIFTP---------PPLPPQTTMPAVADLSPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGAAAGAAAAGACGTTCAACTCCAAGGCCCCCGCCCCGCCGCCCTCAAGATCACCAAAGACTCCCACAAGATCAAAAAGCCGCCGCTCCCACCACCGCACCGGCC
CGTCATCATTTACACCGTCTCTCCCAAGATCATCCACACTGAACCTACCGAGTTCAAGGACTTGGTCCAACGCCTCACCGGCTGCCGACCCTCGTCCTCCAATGATGCCC
TTGATCATCCCTCGGATACAACTATATCATCGATGTCGATGTCGATGCCGATGAGTACAGATCAAGGAGTGGAGAGGGTAGGTCATGGGATATTATCGCCAACGCCGGGG
TTGCTGCCACCGATTTCGCCGAATATTTTCACTCCACCGCCTCTGCCGCCACAGACCACCATGCCGGCGGTCGCTGATCTCAGCCCTTTTACACACTTTTTCCAAGACCT
TAGTCCTATAGCCACCAATCATTTTTCCTCATCTCTAGATTTCTTCCAACAAAACTTCCCTGATTTCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGAAAGAAAAGACGTTCAACTCCAAGGCCCCCGCCCCGCCGCCCTCAAGATCACCAAAGACTCCCACAAGATCAAAAAGCCGCCGCTCCCACCACCGCACCGGCC
CGTCATCATTTACACCGTCTCTCCCAAGATCATCCACACTGAACCTACCGAGTTCAAGGACTTGGTCCAACGCCTCACCGGCTGCCGACCCTCGTCCTCCAATGATGCCC
TTGATCATCCCTCGGATACAACTATATCATCGATGTCGATGTCGATGCCGATGAGTACAGATCAAGGAGTGGAGAGGGTAGGTCATGGGATATTATCGCCAACGCCGGGG
TTGCTGCCACCGATTTCGCCGAATATTTTCACTCCACCGCCTCTGCCGCCACAGACCACCATGCCGGCGGTCGCTGATCTCAGCCCTTTTACACACTTTTTCCAAGACCT
TAGTCCTATAGCCACCAATCATTTTTCCTCATCTCTAGATTTCTTCCAACAAAACTTCCCTGATTTCCATTAA
Protein sequenceShow/hide protein sequence
MPERKDVQLQGPRPAALKITKDSHKIKKPPLPPPHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGCRPSSSNDALDHPSDTTISSMSMSMPMSTDQGVERVGHGILSPTPG
LLPPISPNIFTPPPLPPQTTMPAVADLSPFTHFFQDLSPIATNHFSSSLDFFQQNFPDFH