; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10004005 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004005
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr08:12654620..12654877
RNA-Seq ExpressionHG10004005
SyntenyHG10004005
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058930.1 hypothetical protein E6C27_scaffold98G001050 [Cucumis melo var. makuwa]1.2e-0450.57Show/hide
Query:  MGCAKLHPFILFLLIAFIFLNLPSKFTAARPIVPYFHLIVTSSSPPKIKQYTLK--SQPLRPPSPSSGSPGHQWPDNSVRKSPPPPF
        MG AKL  FI  LLIA I LNL SKF A     P          P   KQ+T K     LRPPS   GS  HQWP+  VR SPPPPF
Subjt:  MGCAKLHPFILFLLIAFIFLNLPSKFTAARPIVPYFHLIVTSSSPPKIKQYTLK--SQPLRPPSPSSGSPGHQWPDNSVRKSPPPPF

KAG6607626.1 hypothetical protein SDJN03_00968, partial [Cucurbita argyrosperma subsp. sororia]8.9e-0847.42Show/hide
Query:  MGCAKLHPFILFLLIAFIFLNLPSKFTA-------ARPIVPYF-----HLIVTSSSPPKIKQYTLKSQPLRPPSPSSGSPGHQWPDNSVRKSPPPPF
        MG A   PFI  LLIA +FL+L SKFTA       ARPI P       +L    +SP   KQY+++S       P S  P HQWP+ SV KSPPPPF
Subjt:  MGCAKLHPFILFLLIAFIFLNLPSKFTA-------ARPIVPYF-----HLIVTSSSPPKIKQYTLKSQPLRPPSPSSGSPGHQWPDNSVRKSPPPPF

KGN47469.1 hypothetical protein Csa_018822 [Cucumis sativus]7.0e-0551.65Show/hide
Query:  MGCAKLHPFILFLLIAFIFLNLPSKFTAARPIVPYFHLIVTSSSPP-KIKQYTLK--SQPLRPPS-PSSGSPG--HQWPDNSVRKSPPPPF
        MG AKL  FI  LLIA IFLNL SKF A        +L  +   PP   KQ+T K     LRPPS P S  PG  HQWP+  +R SPPPPF
Subjt:  MGCAKLHPFILFLLIAFIFLNLPSKFTAARPIVPYFHLIVTSSSPP-KIKQYTLK--SQPLRPPS-PSSGSPG--HQWPDNSVRKSPPPPF

TrEMBL top hitse value%identityAlignment
A0A0A0KF84 Uncharacterized protein3.4e-0551.65Show/hide
Query:  MGCAKLHPFILFLLIAFIFLNLPSKFTAARPIVPYFHLIVTSSSPP-KIKQYTLK--SQPLRPPS-PSSGSPG--HQWPDNSVRKSPPPPF
        MG AKL  FI  LLIA IFLNL SKF A        +L  +   PP   KQ+T K     LRPPS P S  PG  HQWP+  +R SPPPPF
Subjt:  MGCAKLHPFILFLLIAFIFLNLPSKFTAARPIVPYFHLIVTSSSPP-KIKQYTLK--SQPLRPPS-PSSGSPG--HQWPDNSVRKSPPPPF

A0A5D3DJG3 Uncharacterized protein5.8e-0550.57Show/hide
Query:  MGCAKLHPFILFLLIAFIFLNLPSKFTAARPIVPYFHLIVTSSSPPKIKQYTLK--SQPLRPPSPSSGSPGHQWPDNSVRKSPPPPF
        MG AKL  FI  LLIA I LNL SKF A     P          P   KQ+T K     LRPPS   GS  HQWP+  VR SPPPPF
Subjt:  MGCAKLHPFILFLLIAFIFLNLPSKFTAARPIVPYFHLIVTSSSPPKIKQYTLK--SQPLRPPSPSSGSPGHQWPDNSVRKSPPPPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGTGCAAAATTGCATCCCTTTATTTTGTTCCTTCTCATTGCATTCATCTTCTTAAATCTGCCATCAAAATTTACAGCAGCTCGCCCCATAGTTCCTTATTTTCA
TTTGATAGTTACATCGTCGTCACCGCCCAAGATTAAGCAATACACACTGAAGTCACAGCCGTTGCGGCCGCCAAGTCCAAGTTCTGGATCTCCCGGTCACCAATGGCCAG
ATAATTCCGTCCGTAAATCGCCTCCACCTCCTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGTGCAAAATTGCATCCCTTTATTTTGTTCCTTCTCATTGCATTCATCTTCTTAAATCTGCCATCAAAATTTACAGCAGCTCGCCCCATAGTTCCTTATTTTCA
TTTGATAGTTACATCGTCGTCACCGCCCAAGATTAAGCAATACACACTGAAGTCACAGCCGTTGCGGCCGCCAAGTCCAAGTTCTGGATCTCCCGGTCACCAATGGCCAG
ATAATTCCGTCCGTAAATCGCCTCCACCTCCTTTCTAA
Protein sequenceShow/hide protein sequence
MGCAKLHPFILFLLIAFIFLNLPSKFTAARPIVPYFHLIVTSSSPPKIKQYTLKSQPLRPPSPSSGSPGHQWPDNSVRKSPPPPF