; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10004010 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004010
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionextensin-like
Genome locationChr08:12734771..12735088
RNA-Seq ExpressionHG10004010
SyntenyHG10004010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058957.1 hypothetical protein E6C27_scaffold98G001420 [Cucumis melo var. makuwa]4.2e-1562.86Show/hide
Query:  MGFVILASYLSFFLIAFFSLNLPSKLTAHYIPPSSISTNHYKHKPPYKHKPPPLPPSPPICRHAAPPLPPKKQYEFKPLPLTPPPLPPKSTWPQKFTSKS
        MGF  LASYL   LIAFF LNLP+KLTAHYI  SS STN Y +  P    P PLPP PPICR  APP P KKQ + K LP   PP PP   WP++FT KS
Subjt:  MGFVILASYLSFFLIAFFSLNLPSKLTAHYIPPSSISTNHYKHKPPYKHKPPPLPPSPPICRHAAPPLPPKKQYEFKPLPLTPPPLPPKSTWPQKFTSKS

Query:  PPPPF
        PPPPF
Subjt:  PPPPF

TYK29731.1 hypothetical protein E5676_scaffold63236G00010 [Cucumis melo var. makuwa]8.7e-1350.35Show/hide
Query:  MGFVILASYLSFFLIAFFSLNLPSKLTAHYIPPSSISTNHYKHKPP----------YKHKPPPL-----PPSPPICRH--AAPPLPPKKQYEFKPLP---
        MGFVILASYL F L AFFSLNLPSKLTAHYI PSS  T   ++KPP          Y   PPP      PPSP   RH    PP P KK+Y+FKP P   
Subjt:  MGFVILASYLSFFLIAFFSLNLPSKLTAHYIPPSSISTNHYKHKPP----------YKHKPPPL-----PPSPPICRH--AAPPLPPKKQYEFKPLP---

Query:  -----LTPPPL-----------PPKSTWPQKFTSKSPPPPF
                PPL           PPK +WP+KF   SPPPPF
Subjt:  -----LTPPPL-----------PPKSTWPQKFTSKSPPPPF

XP_022939147.1 extensin-like [Cucurbita moschata]1.9e-0446.55Show/hide
Query:  MGFVILAS-YLSFFLIAFFSLNLPSKLTAHYIPPSSISTNHYKHKPPYKHKPPPLP---------PSPPICRH-AAPPLPPKKQYEFKPLPLTPPPLPPK
        MG +IL+S YL   LIA  SL+LPSKL A  + PS   TN ++++PP    PPPLP         P P +C   A PP PPK +++FK  P  P  +PP 
Subjt:  MGFVILAS-YLSFFLIAFFSLNLPSKLTAHYIPPSSISTNHYKHKPPYKHKPPPLP---------PSPPICRH-AAPPLPPKKQYEFKPLPLTPPPLPPK

Query:  STWPQKFTSKSPPPPF
          W +KFT  SPPPPF
Subjt:  STWPQKFTSKSPPPPF

XP_022993352.1 extensin-like [Cucurbita maxima]5.1e-0548.6Show/hide
Query:  MGFVILAS-YLSFFLIAFFSLNLPSKLTAHYIPPSSISTNH-YKHKPPYKHKPPPLPPSPPICRHAAPPLPPKKQYEFKPLPLTPPPLPPKSTWPQKFTS
        MG +ILAS YL   LIA  SL+LPSKL A  + PS  +  H Y+  PP+  +  P PP P +C   APP PPK +++FK  P  P  +PP   W +KFT 
Subjt:  MGFVILAS-YLSFFLIAFFSLNLPSKLTAHYIPPSSISTNH-YKHKPPYKHKPPPLPPSPPICRHAAPPLPPKKQYEFKPLPLTPPPLPPKSTWPQKFTS

Query:  KSPPPPF
         SPPPPF
Subjt:  KSPPPPF

XP_023551507.1 extensin-3-like [Cucurbita pepo subsp. pepo]1.9e-0748.7Show/hide
Query:  MGFVILAS-YLSFFLIAFFSLNLPSKLTAHYIPPSSISTNHYKHKPPYKHKPPPLP---------PSPPICRHAAPPLPPKKQYEFKPLPLTPPPLPPKS
        MG +IL S YL   LIA  SL+LPSKL A  + PS   TN ++++PP    PPPLP         P P +C   APP PPK +++FKP P  P P+P   
Subjt:  MGFVILAS-YLSFFLIAFFSLNLPSKLTAHYIPPSSISTNHYKHKPPYKHKPPPLP---------PSPPICRHAAPPLPPKKQYEFKPLPLTPPPLPPKS

Query:  TWPQKFTSKSPPPPF
         W +KFT KSPPPPF
Subjt:  TWPQKFTSKSPPPPF

TrEMBL top hitse value%identityAlignment
A0A0A0KI69 Uncharacterized protein1.6e-1765.71Show/hide
Query:  MGFVILASYLSFFLIAFFSLNLPSKLTAHYIPPSSISTNHYKHKPPYKHKPPPLPPSPPICRHAAPPLPPKKQYEFKPLPLTPPPLPPKSTWPQKFTSKS
        MGF  LASYL   LIAFF LNLPSKLTAHYI  SS STN Y++ PP    P PL P PPICR  APP P KKQ + KPLP   PP PPK  WP++FT KS
Subjt:  MGFVILASYLSFFLIAFFSLNLPSKLTAHYIPPSSISTNHYKHKPPYKHKPPPLPPSPPICRHAAPPLPPKKQYEFKPLPLTPPPLPPKSTWPQKFTSKS

Query:  PPPPF
        PPPPF
Subjt:  PPPPF

A0A5A7UW72 Uncharacterized protein2.0e-1562.86Show/hide
Query:  MGFVILASYLSFFLIAFFSLNLPSKLTAHYIPPSSISTNHYKHKPPYKHKPPPLPPSPPICRHAAPPLPPKKQYEFKPLPLTPPPLPPKSTWPQKFTSKS
        MGF  LASYL   LIAFF LNLP+KLTAHYI  SS STN Y +  P    P PLPP PPICR  APP P KKQ + K LP   PP PP   WP++FT KS
Subjt:  MGFVILASYLSFFLIAFFSLNLPSKLTAHYIPPSSISTNHYKHKPPYKHKPPPLPPSPPICRHAAPPLPPKKQYEFKPLPLTPPPLPPKSTWPQKFTSKS

Query:  PPPPF
        PPPPF
Subjt:  PPPPF

A0A5D3E2A1 Uncharacterized protein4.2e-1350.35Show/hide
Query:  MGFVILASYLSFFLIAFFSLNLPSKLTAHYIPPSSISTNHYKHKPP----------YKHKPPPL-----PPSPPICRH--AAPPLPPKKQYEFKPLP---
        MGFVILASYL F L AFFSLNLPSKLTAHYI PSS  T   ++KPP          Y   PPP      PPSP   RH    PP P KK+Y+FKP P   
Subjt:  MGFVILASYLSFFLIAFFSLNLPSKLTAHYIPPSSISTNHYKHKPP----------YKHKPPPL-----PPSPPICRH--AAPPLPPKKQYEFKPLP---

Query:  -----LTPPPL-----------PPKSTWPQKFTSKSPPPPF
                PPL           PPK +WP+KF   SPPPPF
Subjt:  -----LTPPPL-----------PPKSTWPQKFTSKSPPPPF

A0A6J1FFZ9 extensin-like9.4e-0546.55Show/hide
Query:  MGFVILAS-YLSFFLIAFFSLNLPSKLTAHYIPPSSISTNHYKHKPPYKHKPPPLP---------PSPPICRH-AAPPLPPKKQYEFKPLPLTPPPLPPK
        MG +IL+S YL   LIA  SL+LPSKL A  + PS   TN ++++PP    PPPLP         P P +C   A PP PPK +++FK  P  P  +PP 
Subjt:  MGFVILAS-YLSFFLIAFFSLNLPSKLTAHYIPPSSISTNHYKHKPPYKHKPPPLP---------PSPPICRH-AAPPLPPKKQYEFKPLPLTPPPLPPK

Query:  STWPQKFTSKSPPPPF
          W +KFT  SPPPPF
Subjt:  STWPQKFTSKSPPPPF

A0A6J1JSJ5 extensin-like2.5e-0548.6Show/hide
Query:  MGFVILAS-YLSFFLIAFFSLNLPSKLTAHYIPPSSISTNH-YKHKPPYKHKPPPLPPSPPICRHAAPPLPPKKQYEFKPLPLTPPPLPPKSTWPQKFTS
        MG +ILAS YL   LIA  SL+LPSKL A  + PS  +  H Y+  PP+  +  P PP P +C   APP PPK +++FK  P  P  +PP   W +KFT 
Subjt:  MGFVILAS-YLSFFLIAFFSLNLPSKLTAHYIPPSSISTNH-YKHKPPYKHKPPPLPPSPPICRHAAPPLPPKKQYEFKPLPLTPPPLPPKSTWPQKFTS

Query:  KSPPPPF
         SPPPPF
Subjt:  KSPPPPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTTGTAATATTGGCCTCATATCTTTCCTTCTTTCTCATTGCATTTTTCTCTTTAAATCTCCCCTCCAAATTGACTGCACATTACATTCCTCCATCTTCAATATC
CACCAACCATTACAAACACAAACCTCCATACAAACACAAACCTCCACCGCTGCCACCGTCACCTCCGATCTGCAGGCATGCTGCACCACCACTGCCACCCAAGAAACAAT
ACGAGTTCAAGCCGCTGCCATTGACACCGCCACCACTGCCACCCAAGTCCACATGGCCACAAAAGTTCACCAGTAAATCGCCTCCACCTCCTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTTGTAATATTGGCCTCATATCTTTCCTTCTTTCTCATTGCATTTTTCTCTTTAAATCTCCCCTCCAAATTGACTGCACATTACATTCCTCCATCTTCAATATC
CACCAACCATTACAAACACAAACCTCCATACAAACACAAACCTCCACCGCTGCCACCGTCACCTCCGATCTGCAGGCATGCTGCACCACCACTGCCACCCAAGAAACAAT
ACGAGTTCAAGCCGCTGCCATTGACACCGCCACCACTGCCACCCAAGTCCACATGGCCACAAAAGTTCACCAGTAAATCGCCTCCACCTCCTTTCTAA
Protein sequenceShow/hide protein sequence
MGFVILASYLSFFLIAFFSLNLPSKLTAHYIPPSSISTNHYKHKPPYKHKPPPLPPSPPICRHAAPPLPPKKQYEFKPLPLTPPPLPPKSTWPQKFTSKSPPPPF