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HG10004015 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004015
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr08:12794175..12794471
RNA-Seq ExpressionHG10004015
SyntenyHG10004015
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054914.1 hypothetical protein E6C27_scaffold43052G00420 [Cucumis melo var. makuwa]2.4e-2065.31Show/hide
Query:  MGYSTANILISAILIASIALRLPSETTASAMAEPSRPPPQFASVPPIYNSPIKVRLKGKADPAEENGDDESEPPLKDEKRGRKPWPKQPVSKSPPPPF
        MG STANILI  I +ASIALRLPSETTA A+A+P    P      PIYN+ +KVRL  +A   EENGDDES+PP K+ K  RKPWPK PVSKSPPPPF
Subjt:  MGYSTANILISAILIASIALRLPSETTASAMAEPSRPPPQFASVPPIYNSPIKVRLKGKADPAEENGDDESEPPLKDEKRGRKPWPKQPVSKSPPPPF

KAE8637368.1 hypothetical protein CSA_004461, partial [Cucumis sativus]2.8e-1358.43Show/hide
Query:  MGYSTANILISAILIASIALRLPSETTASAMAEPSRPPPQFASVPPIYNSPIKVRLKGKADPAEENGDDESEPPLKDEKRGRKPWPKQP
        MG STANI+I  I +ASIALRLP+ETTA A+A+P    P       IYN+ +KVRL  +A   E +GDDES+PPLK+EK  RKPWPK P
Subjt:  MGYSTANILISAILIASIALRLPSETTASAMAEPSRPPPQFASVPPIYNSPIKVRLKGKADPAEENGDDESEPPLKDEKRGRKPWPKQP

KAE8646678.1 hypothetical protein Csa_023589, partial [Cucumis sativus]9.6e-1462.2Show/hide
Query:  SIALRLPSETTASAMAEPSRPPPQFASVPPIYNSPIKVRLKGKADPAEENGDDESEPPLKDEKRGRKPWPKQPVSKSPPPPF
        SIALRLP+ETTA A+A+P    P       IYN+ +KVRL  +A   E +GDDES+PPLK+EK  RKPWPK PVSKSPPPPF
Subjt:  SIALRLPSETTASAMAEPSRPPPQFASVPPIYNSPIKVRLKGKADPAEENGDDESEPPLKDEKRGRKPWPKQPVSKSPPPPF

KAG6578898.1 hypothetical protein SDJN03_23346, partial [Cucurbita argyrosperma subsp. sororia]2.8e-1356.86Show/hide
Query:  MGYSTANILISAILIASIALRLPSETTASAMAEPSRPPPQFASVPP---IYNSPIKVRLKGKADPAEENGDDESE-PPLKDEKRGRKPWPKQPVSKSPPP
        MGYSTAN++   IL+ASIALRLP E  ASAM  PS  PP     P    ++  PIKV L  KA     +G+DE+E P  KDEK  RKPWPKQPV K+PPP
Subjt:  MGYSTANILISAILIASIALRLPSETTASAMAEPSRPPPQFASVPP---IYNSPIKVRLKGKADPAEENGDDESE-PPLKDEKRGRKPWPKQPVSKSPPP

Query:  PF
        PF
Subjt:  PF

KAG6578899.1 hypothetical protein SDJN03_23347, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1558.18Show/hide
Query:  MGYSTANILISAILIASIALRLPSETTASAMAEPSRPPPQFASVPPIYNSP---------IKVRLKGKADPAEENGDDESEPPLKDEK--RG-RKPWPKQ
        MGYSTAN+ I  IL+ASIALR PS TTASA+  PS  P      PPIY+S          IK+ L+GKA P  ENG+DESEPP    K  RG R+PWPK+
Subjt:  MGYSTANILISAILIASIALRLPSETTASAMAEPSRPPPQFASVPPIYNSP---------IKVRLKGKADPAEENGDDESEPPLKDEK--RG-RKPWPKQ

Query:  PVSKSPPPPF
        PV+KSPPPPF
Subjt:  PVSKSPPPPF

TrEMBL top hitse value%identityAlignment
A0A0A0K9K2 Uncharacterized protein8.2e-1962.24Show/hide
Query:  MGYSTANILISAILIASIALRLPSETTASAMAEPSRPPPQFASVPPIYNSPIKVRLKGKADPAEENGDDESEPPLKDEKRGRKPWPKQPVSKSPPPPF
        MG STANI+I  I +ASIALRLP+ETTA A+A+P    P       IYN+ +KVRL  +A   E +GDDES+PPLK+EK  RKPWPK PVSKSPPPPF
Subjt:  MGYSTANILISAILIASIALRLPSETTASAMAEPSRPPPQFASVPPIYNSPIKVRLKGKADPAEENGDDESEPPLKDEKRGRKPWPKQPVSKSPPPPF

A0A5A7UIB8 Uncharacterized protein1.1e-2065.31Show/hide
Query:  MGYSTANILISAILIASIALRLPSETTASAMAEPSRPPPQFASVPPIYNSPIKVRLKGKADPAEENGDDESEPPLKDEKRGRKPWPKQPVSKSPPPPF
        MG STANILI  I +ASIALRLPSETTA A+A+P    P      PIYN+ +KVRL  +A   EENGDDES+PP K+ K  RKPWPK PVSKSPPPPF
Subjt:  MGYSTANILISAILIASIALRLPSETTASAMAEPSRPPPQFASVPPIYNSPIKVRLKGKADPAEENGDDESEPPLKDEKRGRKPWPKQPVSKSPPPPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTATTCGACGGCCAATATTCTAATTTCGGCTATTTTGATAGCATCCATAGCTTTAAGGCTACCTTCCGAAACCACCGCAAGCGCCATGGCTGAGCCTTCTCGGCC
ACCGCCGCAGTTTGCATCGGTGCCGCCGATATACAATTCACCTATAAAAGTTAGGCTTAAAGGCAAAGCAGACCCAGCAGAAGAAAATGGAGATGATGAATCTGAACCAC
CATTGAAGGATGAAAAGCGGGGCAGAAAACCTTGGCCAAAGCAACCTGTATCTAAATCTCCACCACCTCCATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTATTCGACGGCCAATATTCTAATTTCGGCTATTTTGATAGCATCCATAGCTTTAAGGCTACCTTCCGAAACCACCGCAAGCGCCATGGCTGAGCCTTCTCGGCC
ACCGCCGCAGTTTGCATCGGTGCCGCCGATATACAATTCACCTATAAAAGTTAGGCTTAAAGGCAAAGCAGACCCAGCAGAAGAAAATGGAGATGATGAATCTGAACCAC
CATTGAAGGATGAAAAGCGGGGCAGAAAACCTTGGCCAAAGCAACCTGTATCTAAATCTCCACCACCTCCATTTTAG
Protein sequenceShow/hide protein sequence
MGYSTANILISAILIASIALRLPSETTASAMAEPSRPPPQFASVPPIYNSPIKVRLKGKADPAEENGDDESEPPLKDEKRGRKPWPKQPVSKSPPPPF