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HG10004016 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004016
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr08:12799770..12800114
RNA-Seq ExpressionHG10004016
SyntenyHG10004016
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054906.1 hypothetical protein E6C27_scaffold43052G00340 [Cucumis melo var. makuwa]3.1e-0841.07Show/hide
Query:  AASAAYLVFAILVASISPSSPSRASPTTRYAHRHSSPPLPLLQRRIILFSHHSSPPPWPSSNEFPLKPFRRRLNAEGKYKCPKESEKRDKHEERSEEPWP
        A   AYL  AI +A +S  SPS  S +      H  P  P L R ++  + HSS P  P++ E+P KP  +R+N E K KC +     +K  + S++PWP
Subjt:  AASAAYLVFAILVASISPSSPSRASPTTRYAHRHSSPPLPLLQRRIILFSHHSSPPPWPSSNEFPLKPFRRRLNAEGKYKCPKESEKRDKHEERSEEPWP

Query:  RCPVPASPPPPF
        +CPV  SPPPPF
Subjt:  RCPVPASPPPPF

KAA0054910.1 hypothetical protein E6C27_scaffold43052G00380 [Cucumis melo var. makuwa]2.0e-1555.86Show/hide
Query:  AAYLVFAIL-VASISPSSPSRASPTTRYAHRHSSPPLPLLQRRIIL-FSHHSSPPPWPSSNEFPLKPFRRRLNAEGKYKCPKESEKRDKHEERSEEPWPR
        AA+LVFAIL VA IS SSP RA    RY +R S  PLP L +RIIL FSHH S  P   SN +  +   R + AE KY C KE EK+ K    S+EPWPR
Subjt:  AAYLVFAIL-VASISPSSPSRASPTTRYAHRHSSPPLPLLQRRIIL-FSHHSSPPPWPSSNEFPLKPFRRRLNAEGKYKCPKESEKRDKHEERSEEPWPR

Query:  CPVPASPPPPF
        CP+PA  PPPF
Subjt:  CPVPASPPPPF

KAE8646677.1 hypothetical protein Csa_023590, partial [Cucumis sativus]2.0e-0743.43Show/hide
Query:  ASISPSSPSRASPTTRYAHRHSSPPLPLLQRRIILFSHHSSPPPWPSSNEFPLKPFRRRLNAEGKYKCPKESEKRDKHEERSEEPWPRCPVPASPPPPF
        AS SPSS S A+     A  +  P  P L R ++  + HSS PP P++ E+P K   RR+N E K KC +     +K  + +++PWP+CPVP SPPPPF
Subjt:  ASISPSSPSRASPTTRYAHRHSSPPLPLLQRRIILFSHHSSPPPWPSSNEFPLKPFRRRLNAEGKYKCPKESEKRDKHEERSEEPWPRCPVPASPPPPF

TrEMBL top hitse value%identityAlignment
A0A0A0KCN7 Uncharacterized protein3.4e-1655.86Show/hide
Query:  AAYLVFAIL-VASISPSSPSRASPTTRYAH-RHSSPPLPLLQRRIILFSHHSSPPPWPSSNEFPLKPFRRRLNAEGKYKCPKESEKRDKHEERSEEPWPR
        AA+ VFAIL VA ISP+SP RAS   RY +   SSP LPL    I+ FSHH SP PW  SN    K   R +N E KY C KE EK+ K    S++PWPR
Subjt:  AAYLVFAIL-VASISPSSPSRASPTTRYAH-RHSSPPLPLLQRRIILFSHHSSPPPWPSSNEFPLKPFRRRLNAEGKYKCPKESEKRDKHEERSEEPWPR

Query:  CPVPASPPPPF
        CP+PA PPPPF
Subjt:  CPVPASPPPPF

A0A0A0KEF9 Uncharacterized protein6.8e-0944.74Show/hide
Query:  AASAAYLVFAIL--VASISPSSPSRASPTTRYAHRHSSPPLPLLQRRIILFSHHSSPPPWPSSNEFPLKPFRRRLNAEGKYKCPKESEKRDKHEERSEEP
        A   AYL  AIL  VAS SPSS S A+     A  +  P  P L R ++  + HSS PP P++ E+P K   RR+N E K KC +     +K  + +++P
Subjt:  AASAAYLVFAIL--VASISPSSPSRASPTTRYAHRHSSPPLPLLQRRIILFSHHSSPPPWPSSNEFPLKPFRRRLNAEGKYKCPKESEKRDKHEERSEEP

Query:  WPRCPVPASPPPPF
        WP+CPVP SPPPPF
Subjt:  WPRCPVPASPPPPF

A0A5A7UHY5 Uncharacterized protein9.8e-1655.86Show/hide
Query:  AAYLVFAIL-VASISPSSPSRASPTTRYAHRHSSPPLPLLQRRIIL-FSHHSSPPPWPSSNEFPLKPFRRRLNAEGKYKCPKESEKRDKHEERSEEPWPR
        AA+LVFAIL VA IS SSP RA    RY +R S  PLP L +RIIL FSHH S  P   SN +  +   R + AE KY C KE EK+ K    S+EPWPR
Subjt:  AAYLVFAIL-VASISPSSPSRASPTTRYAHRHSSPPLPLLQRRIIL-FSHHSSPPPWPSSNEFPLKPFRRRLNAEGKYKCPKESEKRDKHEERSEEPWPR

Query:  CPVPASPPPPF
        CP+PA  PPPF
Subjt:  CPVPASPPPPF

A0A5D3DGG9 Uncharacterized protein1.5e-0841.07Show/hide
Query:  AASAAYLVFAILVASISPSSPSRASPTTRYAHRHSSPPLPLLQRRIILFSHHSSPPPWPSSNEFPLKPFRRRLNAEGKYKCPKESEKRDKHEERSEEPWP
        A   AYL  AI +A +S  SPS  S +      H  P  P L R ++  + HSS P  P++ E+P KP  +R+N E K KC +     +K  + S++PWP
Subjt:  AASAAYLVFAILVASISPSSPSRASPTTRYAHRHSSPPLPLLQRRIILFSHHSSPPPWPSSNEFPLKPFRRRLNAEGKYKCPKESEKRDKHEERSEEPWP

Query:  RCPVPASPPPPF
        +CPV  SPPPPF
Subjt:  RCPVPASPPPPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCAGCTTCGGCAGCATACCTAGTTTTTGCCATTTTGGTGGCTTCAATTTCTCCAAGCTCACCGTCGAGAGCCTCCCCCACCACACGCTACGCCCACCGTCACTC
TTCTCCTCCTCTGCCGCTGCTCCAACGTCGAATAATCCTCTTCAGTCACCACAGCTCTCCCCCACCGTGGCCGTCGTCAAACGAGTTTCCCCTGAAACCATTCCGCCGTC
GTCTAAATGCTGAGGGGAAATATAAGTGTCCCAAAGAATCTGAAAAACGAGATAAACATGAAGAGAGAAGTGAAGAACCGTGGCCAAGGTGCCCCGTCCCTGCATCGCCG
CCACCTCCATTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCAGCTTCGGCAGCATACCTAGTTTTTGCCATTTTGGTGGCTTCAATTTCTCCAAGCTCACCGTCGAGAGCCTCCCCCACCACACGCTACGCCCACCGTCACTC
TTCTCCTCCTCTGCCGCTGCTCCAACGTCGAATAATCCTCTTCAGTCACCACAGCTCTCCCCCACCGTGGCCGTCGTCAAACGAGTTTCCCCTGAAACCATTCCGCCGTC
GTCTAAATGCTGAGGGGAAATATAAGTGTCCCAAAGAATCTGAAAAACGAGATAAACATGAAGAGAGAAGTGAAGAACCGTGGCCAAGGTGCCCCGTCCCTGCATCGCCG
CCACCTCCATTCTAG
Protein sequenceShow/hide protein sequence
MAAASAAYLVFAILVASISPSSPSRASPTTRYAHRHSSPPLPLLQRRIILFSHHSSPPPWPSSNEFPLKPFRRRLNAEGKYKCPKESEKRDKHEERSEEPWPRCPVPASP
PPPF