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HG10004022 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004022
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSASA domain-containing protein
Genome locationChr08:12896504..12896755
RNA-Seq ExpressionHG10004022
SyntenyHG10004022
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637379.1 hypothetical protein CSA_004472 [Cucumis sativus]1.1e-0753.73Show/hide
Query:  MYVKIANHDLYISPLINYVYDIRRVEEAVKQELLAITTMDAKEVIQRVMNQLGQQPYNQDGHFSVYT
        + VKIANHDL ISP I+YV D+R+ EEAV  ELL +TT+DAK+ +Q V+N         D   SVYT
Subjt:  MYVKIANHDLYISPLINYVYDIRRVEEAVKQELLAITTMDAKEVIQRVMNQLGQQPYNQDGHFSVYT

KAE8646674.1 hypothetical protein Csa_005158 [Cucumis sativus]1.4e-2167.07Show/hide
Query:  MYVKIANHDLYISPLINYVYDIRRVEEAVKQELLAITTMDAKEVIQRVMNQLGQQPYNQDGHFSVYTEVEIGIMLAQAYLKF
        + VKIANHDL ISP I+YV D+R+ EEAV  ELL +TT+DAK+ +Q V+N LGQ+PYN DGH SV+TEV+IGIMLA+AY+KF
Subjt:  MYVKIANHDLYISPLINYVYDIRRVEEAVKQELLAITTMDAKEVIQRVMNQLGQQPYNQDGHFSVYTEVEIGIMLAQAYLKF

XP_022134349.1 probable carbohydrate esterase At4g34215 [Momordica charantia]2.2e-1155.56Show/hide
Query:  VKIANHDLYISPLINYVYDIRRVEEAVKQELLAITTMDAKEVIQRVMNQLGQQP-YNQD-GHFSVYTEVEIGIMLAQAYLK
        VKI  +D  ISP++NY   IRR +EAVK +L  I+T+DAK+ IQRV++   Q+P  N+D GH SVY+EVE+G MLA AYL+
Subjt:  VKIANHDLYISPLINYVYDIRRVEEAVKQELLAITTMDAKEVIQRVMNQLGQQP-YNQD-GHFSVYTEVEIGIMLAQAYLK

XP_022141846.1 probable carbohydrate esterase At4g34215 [Momordica charantia]7.6e-0433.77Show/hide
Query:  VKIANHDLYISPLINYVYDIRRVEEAVKQELLAITTMDAKEVIQRVMNQLGQQPYNQDGHFSVYTEVEIGIMLAQAY
        VKI  HD +ISPLIN++ D+ + +E + ++L+ +  +D K+ +      + Q      GH S  +EV++G MLA ++
Subjt:  VKIANHDLYISPLINYVYDIRRVEEAVKQELLAITTMDAKEVIQRVMNQLGQQPYNQDGHFSVYTEVEIGIMLAQAY

TrEMBL top hitse value%identityAlignment
A0A0A0KCN1 SASA domain-containing protein6.7e-2267.07Show/hide
Query:  MYVKIANHDLYISPLINYVYDIRRVEEAVKQELLAITTMDAKEVIQRVMNQLGQQPYNQDGHFSVYTEVEIGIMLAQAYLKF
        + VKIANHDL ISP I+YV D+R+ EEAV  ELL +TT+DAK+ +Q V+N LGQ+PYN DGH SV+TEV+IGIMLA+AY+KF
Subjt:  MYVKIANHDLYISPLINYVYDIRRVEEAVKQELLAITTMDAKEVIQRVMNQLGQQPYNQDGHFSVYTEVEIGIMLAQAYLKF

A0A6J1BYJ2 probable carbohydrate esterase At4g342151.1e-1155.56Show/hide
Query:  VKIANHDLYISPLINYVYDIRRVEEAVKQELLAITTMDAKEVIQRVMNQLGQQP-YNQD-GHFSVYTEVEIGIMLAQAYLK
        VKI  +D  ISP++NY   IRR +EAVK +L  I+T+DAK+ IQRV++   Q+P  N+D GH SVY+EVE+G MLA AYL+
Subjt:  VKIANHDLYISPLINYVYDIRRVEEAVKQELLAITTMDAKEVIQRVMNQLGQQP-YNQD-GHFSVYTEVEIGIMLAQAYLK

A0A6J1CKF9 probable carbohydrate esterase At4g342153.7e-0433.77Show/hide
Query:  VKIANHDLYISPLINYVYDIRRVEEAVKQELLAITTMDAKEVIQRVMNQLGQQPYNQDGHFSVYTEVEIGIMLAQAY
        VKI  HD +ISPLIN++ D+ + +E + ++L+ +  +D K+ +      + Q      GH S  +EV++G MLA ++
Subjt:  VKIANHDLYISPLINYVYDIRRVEEAVKQELLAITTMDAKEVIQRVMNQLGQQPYNQDGHFSVYTEVEIGIMLAQAY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGTGAAAATAGCAAACCACGACCTCTATATCAGCCCATTAATAAATTATGTGTACGACATAAGAAGGGTAGAAGAGGCAGTCAAGCAGGAGCTGCTTGCCATAAC
TACTATGGACGCTAAAGAAGTCATCCAACGCGTTATGAATCAACTCGGCCAACAACCTTATAATCAAGATGGACATTTCAGTGTGTACACTGAAGTGGAAATAGGCATAA
TGCTGGCCCAGGCTTATCTAAAGTTTGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTACGTGAAAATAGCAAACCACGACCTCTATATCAGCCCATTAATAAATTATGTGTACGACATAAGAAGGGTAGAAGAGGCAGTCAAGCAGGAGCTGCTTGCCATAAC
TACTATGGACGCTAAAGAAGTCATCCAACGCGTTATGAATCAACTCGGCCAACAACCTTATAATCAAGATGGACATTTCAGTGTGTACACTGAAGTGGAAATAGGCATAA
TGCTGGCCCAGGCTTATCTAAAGTTTGTCTAA
Protein sequenceShow/hide protein sequence
MYVKIANHDLYISPLINYVYDIRRVEEAVKQELLAITTMDAKEVIQRVMNQLGQQPYNQDGHFSVYTEVEIGIMLAQAYLKFV