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HG10004070 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004070
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr08:13355515..13355946
RNA-Seq ExpressionHG10004070
SyntenyHG10004070
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011656615.1 uncharacterized protein LOC105435757 [Cucumis sativus]5.8e-6889.51Show/hide
Query:  MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQQAA
        MARQLQ++H SQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATV+TTQR     VN TEPE+GNDEMFFSREQQA+
Subjt:  MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQQAA

Query:  IWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK
        +W KNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPR LLTWK
Subjt:  IWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK

XP_022959632.1 uncharacterized protein LOC111460648 [Cucurbita moschata]6.4e-6787.5Show/hide
Query:  MARQLQ-MMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQQA
        MARQLQ MMH SQ TAQVGMAG SLLLCAFALFMCASHARKWR RWNACLDYGYEFEDPVIELNQEATV+TTQRVN CVVNA EPE+GNDEMFFSREQ+A
Subjt:  MARQLQ-MMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQQA

Query:  AIWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK
        A+W+KNILMGGKCQLPDFSGVILYD NGN VTPA+T   LLTWK
Subjt:  AIWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK

XP_022990795.1 uncharacterized protein LOC111487577 [Cucurbita maxima]8.3e-6787.5Show/hide
Query:  MARQLQ-MMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQQA
        MARQLQ MMH SQ TAQVGMAG SLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATV+TTQRVN CVVNATEPE+ NDEMFFSREQ+A
Subjt:  MARQLQ-MMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQQA

Query:  AIWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK
         +W+KNILMGGKCQLPDFSGVILYD NGN VTPA+T   LLTWK
Subjt:  AIWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK

XP_023512486.1 uncharacterized protein LOC111777221 [Cucurbita pepo subsp. pepo]3.4e-6888.89Show/hide
Query:  MARQLQ-MMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQQA
        MARQLQ MMH SQ TAQVGMAG SLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATV+TTQRVN CVVNATEPE+GNDEMFFSREQ+A
Subjt:  MARQLQ-MMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQQA

Query:  AIWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK
        A+W+KNILMGGKCQLPDFSGVILYD NGN VTPA+T   LLTWK
Subjt:  AIWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK

XP_038886392.1 uncharacterized protein LOC120076591 [Benincasa hispida]2.4e-7496.5Show/hide
Query:  MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQQAA
        MARQLQMMHPSQ TAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATE E+ NDEMFFSREQQAA
Subjt:  MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQQAA

Query:  IWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK
        IWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPR LLTWK
Subjt:  IWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK

TrEMBL top hitse value%identityAlignment
A0A0A0K8P1 Uncharacterized protein2.8e-6889.51Show/hide
Query:  MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQQAA
        MARQLQ++H SQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATV+TTQR     VN TEPE+GNDEMFFSREQQA+
Subjt:  MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQQAA

Query:  IWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK
        +W KNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPR LLTWK
Subjt:  IWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK

A0A1S3C3W7 uncharacterized protein LOC1034965801.7e-6586.71Show/hide
Query:  MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQQAA
        MARQLQ++H SQGT QVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATV+TT +     VNATEPE+ N+EMFFSREQQA+
Subjt:  MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQQAA

Query:  IWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK
        IW KNILMGGKCQLPDFSGVILYDPNGN VTPAKTPR LLTWK
Subjt:  IWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK

A0A5A7SQ79 Putative Nucleolar protein 161.7e-6586.71Show/hide
Query:  MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQQAA
        MARQLQ++H SQGT QVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATV+TT +     VNATEPE+ N+EMFFSREQQA+
Subjt:  MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQQAA

Query:  IWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK
        IW KNILMGGKCQLPDFSGVILYDPNGN VTPAKTPR LLTWK
Subjt:  IWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK

A0A6J1H530 uncharacterized protein LOC1114606483.1e-6787.5Show/hide
Query:  MARQLQ-MMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQQA
        MARQLQ MMH SQ TAQVGMAG SLLLCAFALFMCASHARKWR RWNACLDYGYEFEDPVIELNQEATV+TTQRVN CVVNA EPE+GNDEMFFSREQ+A
Subjt:  MARQLQ-MMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQQA

Query:  AIWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK
        A+W+KNILMGGKCQLPDFSGVILYD NGN VTPA+T   LLTWK
Subjt:  AIWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK

A0A6J1JR28 uncharacterized protein LOC1114875774.0e-6787.5Show/hide
Query:  MARQLQ-MMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQQA
        MARQLQ MMH SQ TAQVGMAG SLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATV+TTQRVN CVVNATEPE+ NDEMFFSREQ+A
Subjt:  MARQLQ-MMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQQA

Query:  AIWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK
         +W+KNILMGGKCQLPDFSGVILYD NGN VTPA+T   LLTWK
Subjt:  AIWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49000.1 unknown protein4.2e-0847.06Show/hide
Query:  DEMFFSREQQAAIWQKNILMGGKCQLPDFSGVILYDPNGNAV--TPAKTPR
        +E   + E++  +WQ+ ILMGGKC+  DFSGVI YD NG  +   P ++PR
Subjt:  DEMFFSREQQAAIWQKNILMGGKCQLPDFSGVILYDPNGNAV--TPAKTPR

AT1G71740.1 unknown protein1.5e-2142.22Show/hide
Query:  PSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQ-QAAIWQKNILM
        P   T  + +  + L   +  L   ASH+++  RRW AC  YG    +PVI L  + T+M                +G+  M  S +Q +  +WQKNILM
Subjt:  PSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQ-QAAIWQKNILM

Query:  GGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK
        GGKCQLPDFSGVILYD +G  V PAK    LLTWK
Subjt:  GGKCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK

AT3G14760.1 unknown protein3.3e-0564.29Show/hide
Query:  IWQKNILMGGKCQLPDFSGVILYDPNGN
        +WQ+ ILMG KC+LP FSG+ILYD  G+
Subjt:  IWQKNILMGGKCQLPDFSGVILYDPNGN

AT3G18560.1 unknown protein1.6e-0748.94Show/hide
Query:  EQQAAIWQKNILMGGKCQLPDFSGVILYDPNGNAV--TPAKTPRALL
        E++  +WQ+ ILMGGKC+  D+SGVI YD +G+ +   P ++PRA L
Subjt:  EQQAAIWQKNILMGGKCQLPDFSGVILYDPNGNAV--TPAKTPRALL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGGCAACTGCAAATGATGCATCCTTCACAAGGCACAGCTCAGGTTGGCATGGCTGGTGTGAGCCTTCTCCTGTGTGCTTTTGCATTGTTCATGTGTGCTTCCCA
TGCCCGGAAATGGCGTCGTCGTTGGAATGCTTGCTTGGATTATGGATATGAGTTTGAGGATCCTGTCATAGAGCTGAACCAAGAAGCAACGGTTATGACTACGCAACGAG
TGAATGCCTGTGTTGTGAATGCCACCGAGCCGGAGAGTGGCAATGATGAGATGTTCTTCAGTAGAGAGCAACAAGCTGCTATATGGCAGAAGAACATACTCATGGGTGGG
AAGTGCCAGCTACCGGACTTCTCAGGTGTCATATTATATGACCCCAATGGAAATGCTGTAACCCCTGCCAAAACTCCGCGTGCTTTACTCACCTGGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGGCAACTGCAAATGATGCATCCTTCACAAGGCACAGCTCAGGTTGGCATGGCTGGTGTGAGCCTTCTCCTGTGTGCTTTTGCATTGTTCATGTGTGCTTCCCA
TGCCCGGAAATGGCGTCGTCGTTGGAATGCTTGCTTGGATTATGGATATGAGTTTGAGGATCCTGTCATAGAGCTGAACCAAGAAGCAACGGTTATGACTACGCAACGAG
TGAATGCCTGTGTTGTGAATGCCACCGAGCCGGAGAGTGGCAATGATGAGATGTTCTTCAGTAGAGAGCAACAAGCTGCTATATGGCAGAAGAACATACTCATGGGTGGG
AAGTGCCAGCTACCGGACTTCTCAGGTGTCATATTATATGACCCCAATGGAAATGCTGTAACCCCTGCCAAAACTCCGCGTGCTTTACTCACCTGGAAGTGA
Protein sequenceShow/hide protein sequence
MARQLQMMHPSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATEPESGNDEMFFSREQQAAIWQKNILMGG
KCQLPDFSGVILYDPNGNAVTPAKTPRALLTWK