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HG10004077 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004077
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr08:13450298..13453360
RNA-Seq ExpressionHG10004077
SyntenyHG10004077
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031648.1 uncharacterized protein E6C27_scaffold139G004210 [Cucumis melo var. makuwa]3.5e-5877.92Show/hide
Query:  MDQSESEIREVEETCSNSELQPLIESQNPSLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
        MDQSE+EIREV+ET S SELQPL+E+QNPS NSKTVK KVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQ+EVRDILDKYGFKSVFAFKPDSGRGVPIRFN
Subjt:  MDQSESEIREVEETCSNSELQPLIESQNPSLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFN

Query:  PRNGRSILTYRDGAEIFIDGEPKEHLAVDEEEDI-----LEYPRILEII-CVVV
        PRNGRSILTYRDGAEIFIDGEPK   + +  + I     L+Y + +E + C++V
Subjt:  PRNGRSILTYRDGAEIFIDGEPKEHLAVDEEEDI-----LEYPRILEII-CVVV

XP_004140944.1 uncharacterized protein LOC101218374 [Cucumis sativus]1.3e-5789.68Show/hide
Query:  MDQSESEIREVEETCSNSELQPLIESQNPSLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
        MDQSESEIREVEET S SELQPL+E+ NPS NSK+VK KVPE+EIHL+RQGKGPIDVFKSSLGGWDQDQ+EVRDILDKYGFKSVFAFKPDSGRGVPIRFN
Subjt:  MDQSESEIREVEETCSNSELQPLIESQNPSLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFN

Query:  PRNGRSILTYRDGAEIFIDGEPKEHL
        PRNGRSILTYRDGAEIFIDGEPK+ L
Subjt:  PRNGRSILTYRDGAEIFIDGEPKEHL

XP_008456707.1 PREDICTED: uncharacterized protein LOC103496571 [Cucumis melo]1.6e-5891.27Show/hide
Query:  MDQSESEIREVEETCSNSELQPLIESQNPSLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
        MDQSE+EIREV+ET S SELQPL+E+QNPS NSKTVK KVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQ+EVRDILDKYGFKSVFAFKPDSGRGVPIRFN
Subjt:  MDQSESEIREVEETCSNSELQPLIESQNPSLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFN

Query:  PRNGRSILTYRDGAEIFIDGEPKEHL
        PRNGRSILTYRDGAEIFIDGEPK+ L
Subjt:  PRNGRSILTYRDGAEIFIDGEPKEHL

XP_022990468.1 uncharacterized protein LOC111487320 [Cucurbita maxima]3.0e-5789.52Show/hide
Query:  QSESEIREVEETCSNSELQPLIESQNPSLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QSESEIRE+EET SNSELQPL++SQNPS NS+TVK KVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQ+EVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSESEIREVEETCSNSELQPLIESQNPSLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIFIDGEPKEHL
        NGRSILTYRDGAEI+IDGEPK+ L
Subjt:  NGRSILTYRDGAEIFIDGEPKEHL

XP_038884244.1 uncharacterized protein LOC120075142 [Benincasa hispida]1.8e-5789.68Show/hide
Query:  MDQSESEIREVEETCSNSELQPLIESQNPSLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
        MDQSESEIREVE+T S SELQPL+ESQNP+ NSK V+ KVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQ+EVRDIL+KYGFKSVFAFKPDSGRGVPIRFN
Subjt:  MDQSESEIREVEETCSNSELQPLIESQNPSLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFN

Query:  PRNGRSILTYRDGAEIFIDGEPKEHL
        PRNGRSILTYRDGAEIFIDGEPK+ L
Subjt:  PRNGRSILTYRDGAEIFIDGEPKEHL

TrEMBL top hitse value%identityAlignment
A0A0A0K9G4 Uncharacterized protein6.5e-5889.68Show/hide
Query:  MDQSESEIREVEETCSNSELQPLIESQNPSLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
        MDQSESEIREVEET S SELQPL+E+ NPS NSK+VK KVPE+EIHL+RQGKGPIDVFKSSLGGWDQDQ+EVRDILDKYGFKSVFAFKPDSGRGVPIRFN
Subjt:  MDQSESEIREVEETCSNSELQPLIESQNPSLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFN

Query:  PRNGRSILTYRDGAEIFIDGEPKEHL
        PRNGRSILTYRDGAEIFIDGEPK+ L
Subjt:  PRNGRSILTYRDGAEIFIDGEPKEHL

A0A1S3C3V7 uncharacterized protein LOC1034965717.7e-5991.27Show/hide
Query:  MDQSESEIREVEETCSNSELQPLIESQNPSLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
        MDQSE+EIREV+ET S SELQPL+E+QNPS NSKTVK KVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQ+EVRDILDKYGFKSVFAFKPDSGRGVPIRFN
Subjt:  MDQSESEIREVEETCSNSELQPLIESQNPSLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFN

Query:  PRNGRSILTYRDGAEIFIDGEPKEHL
        PRNGRSILTYRDGAEIFIDGEPK+ L
Subjt:  PRNGRSILTYRDGAEIFIDGEPKEHL

A0A5A7SM03 Uncharacterized protein1.7e-5877.92Show/hide
Query:  MDQSESEIREVEETCSNSELQPLIESQNPSLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
        MDQSE+EIREV+ET S SELQPL+E+QNPS NSKTVK KVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQ+EVRDILDKYGFKSVFAFKPDSGRGVPIRFN
Subjt:  MDQSESEIREVEETCSNSELQPLIESQNPSLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFN

Query:  PRNGRSILTYRDGAEIFIDGEPKEHLAVDEEEDI-----LEYPRILEII-CVVV
        PRNGRSILTYRDGAEIFIDGEPK   + +  + I     L+Y + +E + C++V
Subjt:  PRNGRSILTYRDGAEIFIDGEPKEHLAVDEEEDI-----LEYPRILEII-CVVV

A0A6J1HAT7 uncharacterized protein LOC1114611103.2e-5774.36Show/hide
Query:  QSESEIREVEETCSNSELQPLIESQNPSLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QSESEIRE+EET SNSELQPL++SQNPS NSKTVK KVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQ+EVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSESEIREVEETCSNSELQPLIESQNPSLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIFIDGEPKEHLAVDEEEDILEYPRILEIICVVVHFNASLDPWI
        NGRSILTYR GAEI+IDGEPK+ L +     I+    I+ I+  ++  + S   W+
Subjt:  NGRSILTYRDGAEIFIDGEPKEHLAVDEEEDILEYPRILEIICVVVHFNASLDPWI

A0A6J1JTD1 uncharacterized protein LOC1114873201.4e-5789.52Show/hide
Query:  QSESEIREVEETCSNSELQPLIESQNPSLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QSESEIRE+EET SNSELQPL++SQNPS NS+TVK KVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQ+EVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSESEIREVEETCSNSELQPLIESQNPSLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIFIDGEPKEHL
        NGRSILTYRDGAEI+IDGEPK+ L
Subjt:  NGRSILTYRDGAEIFIDGEPKEHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G71780.1 unknown protein9.6e-3862.5Show/hide
Query:  REVEETCSNSELQPLIESQNP--SLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRS
        +E+EET       PL+E+  P   L S T   KVPEVEIHLY+ GKGPIDVFKS+LGG++QDQ+EVR IL+KYG K++FAF  + GR VPIRF+PRNGRS
Subjt:  REVEETCSNSELQPLIESQNP--SLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRS

Query:  ILTYRDGAEIFIDGEPKEHL
        +L YRDGA I+IDGEP++ L
Subjt:  ILTYRDGAEIFIDGEPKEHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAGAGCGAGAGCGAAATCCGAGAAGTTGAAGAAACATGCTCCAACTCGGAGCTGCAACCTCTCATCGAGAGCCAGAATCCTAGTTTGAACTCCAAAACTGTGAA
GATGAAGGTTCCGGAGGTTGAGATCCATCTTTATCGCCAGGGCAAAGGTCCGATCGATGTGTTTAAATCAAGTCTTGGTGGTTGGGATCAAGACCAGATTGAGGTCCGAG
ATATTCTTGACAAATACGGGTTCAAGTCCGTATTCGCCTTTAAACCTGACTCCGGTCGTGGCGTCCCGATTCGATTCAACCCTAGAAATGGCAGGTCTATACTGACTTAC
AGAGATGGAGCCGAAATTTTCATCGACGGAGAGCCTAAGGAACATTTGGCTGTTGATGAAGAAGAGGATATTTTAGAGTATCCAAGGATTTTGGAAATTATTTGTGTTGT
AGTTCACTTTAATGCTTCGTTGGACCCATGGATTCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCAGAGCGAGAGCGAAATCCGAGAAGTTGAAGAAACATGCTCCAACTCGGAGCTGCAACCTCTCATCGAGAGCCAGAATCCTAGTTTGAACTCCAAAACTGTGAA
GATGAAGGTTCCGGAGGTTGAGATCCATCTTTATCGCCAGGGCAAAGGTCCGATCGATGTGTTTAAATCAAGTCTTGGTGGTTGGGATCAAGACCAGATTGAGGTCCGAG
ATATTCTTGACAAATACGGGTTCAAGTCCGTATTCGCCTTTAAACCTGACTCCGGTCGTGGCGTCCCGATTCGATTCAACCCTAGAAATGGCAGGTCTATACTGACTTAC
AGAGATGGAGCCGAAATTTTCATCGACGGAGAGCCTAAGGAACATTTGGCTGTTGATGAAGAAGAGGATATTTTAGAGTATCCAAGGATTTTGGAAATTATTTGTGTTGT
AGTTCACTTTAATGCTTCGTTGGACCCATGGATTCCCTGA
Protein sequenceShow/hide protein sequence
MDQSESEIREVEETCSNSELQPLIESQNPSLNSKTVKMKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQIEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTY
RDGAEIFIDGEPKEHLAVDEEEDILEYPRILEIICVVVHFNASLDPWIP