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HG10004112 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004112
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSHSP domain-containing protein
Genome locationChr08:13826381..13830126
RNA-Seq ExpressionHG10004112
SyntenyHG10004112
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A0KB53 SHSP domain-containing protein6.1e-0465.12Show/hide
Query:  MSSQIVNQNWRN-VTQSNQQFFPDKIWDEDEEQNQRVLSMVLP
        MSSQIVNQ+WRN VTQ NQQFFP   ++E EE+N+   SM LP
Subjt:  MSSQIVNQNWRN-VTQSNQQFFPDKIWDEDEEQNQRVLSMVLP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGCCAGATCGTGAACCAAAATTGGCGAAACGTAACTCAATCAAATCAACAGTTTTTTCCAGATAAAATATGGGACGAAGATGAAGAACAAAACCAAAGGGTATT
AAGCATGGTACTTCCAGTATCTGTTTATGTCGTGCAGGTCTTCCTGACATCCTTTGGAGCTTTGGAGTTGGACAACCTCAAAGAGGAGGAGGGAAACAAGGCTATCACAT
TCTTGTGGTGCTTCTGGAGCTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGAGCCAGATCGTGAACCAAAATTGGCGAAACGTAACTCAATCAAATCAACAGTTTTTTCCAGATAAAATATGGGACGAAGATGAAGAACAAAACCAAAGGGTATT
AAGCATGGTACTTCCAGTATCTGTTTATGTCGTGCAGGTCTTCCTGACATCCTTTGGAGCTTTGGAGTTGGACAACCTCAAAGAGGAGGAGGGAAACAAGGCTATCACAT
TCTTGTGGTGCTTCTGGAGCTATTAG
Protein sequenceShow/hide protein sequence
MSSQIVNQNWRNVTQSNQQFFPDKIWDEDEEQNQRVLSMVLPVSVYVVQVFLTSFGALELDNLKEEEGNKAITFLWCFWSY