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HG10004114 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004114
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr08:13842250..13843965
RNA-Seq ExpressionHG10004114
SyntenyHG10004114
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0571627.1 hypothetical protein [Gossypium lobatum]5.4e-1041.73Show/hide
Query:  LDLLLTFTYFRFDLSPPPAPNEKLPPALALKSKLPEAWNGEGFCGVGTFCWLPPNWKGFAPSGEGA---------VEPNTNPDDGEKVVAGVGKVDGVVE
        L  L TFT F  DLS PP PNEKLPP  A  S LPEA NG+GFCG     W PPNW   AP G  A         V+PNT P     V+   G  DGV  
Subjt:  LDLLLTFTYFRFDLSPPPAPNEKLPPALALKSKLPEAWNGEGFCGVGTFCWLPPNWKGFAPSGEGA---------VEPNTNPDDGEKVVAGVGKVDGVVE

Query:  TRDPLLRFELVLGELKENKL-GVGVDVDVETDDNNKFPD
          +     EL    + + K+ G  +    E DD  + PD
Subjt:  TRDPLLRFELVLGELKENKL-GVGVDVDVETDDNNKFPD

MBA0750308.1 hypothetical protein [Gossypium gossypioides]3.2e-1040.28Show/hide
Query:  LDLLLTFTYFRFDLSPPPAPNEKLPPALALKSKLPEAWNGEGFCGVGTFCWLPPNWKGFAPSGEGA---------VEPNTN-----PDDGEKVVAGVGKV
        L  L TFT F  DLS PP PNEKLPP  A  S LPEA NG+GFCG     W PPNW   AP G  A         V+PNT      P+ G   VA   +V
Subjt:  LDLLLTFTYFRFDLSPPPAPNEKLPPALALKSKLPEAWNGEGFCGVGTFCWLPPNWKGFAPSGEGA---------VEPNTN-----PDDGEKVVAGVGKV

Query:  DGVVETRDPLLRFELVLGELKENKLGVGVDVDVETDDNNKFPDV
        +  +E  +  +    ++GEL    LG   +VD   ++ +  P+V
Subjt:  DGVVETRDPLLRFELVLGELKENKLGVGVDVDVETDDNNKFPDV

MBA0872537.1 hypothetical protein [Gossypium schwendimanii]1.8e-1040.28Show/hide
Query:  LDLLLTFTYFRFDLSPPPAPNEKLPPALALKSKLPEAWNGEGFCGVGTFCWLPPNWKGFAPSGEGA---------VEPNTN-----PDDGEKVVAGVGKV
        L  L TFT F  DLS PP PNEKLPP  A  S LPEA NG+GFCG     W PPNW   AP G  A         V+PNT      P+ G   VA   +V
Subjt:  LDLLLTFTYFRFDLSPPPAPNEKLPPALALKSKLPEAWNGEGFCGVGTFCWLPPNWKGFAPSGEGA---------VEPNTN-----PDDGEKVVAGVGKV

Query:  DGVVETRDPLLRFELVLGELKENKLGVGVDVDVETDDNNKFPDV
        +  +E  + L+    ++G L    LG   +VD   ++ +  P+V
Subjt:  DGVVETRDPLLRFELVLGELKENKLGVGVDVDVETDDNNKFPDV

TrEMBL top hitse value%identityAlignment
A0A7J8N3Q2 Uncharacterized protein2.6e-1041.73Show/hide
Query:  LDLLLTFTYFRFDLSPPPAPNEKLPPALALKSKLPEAWNGEGFCGVGTFCWLPPNWKGFAPSGEGA---------VEPNTNPDDGEKVVAGVGKVDGVVE
        L  L TFT F  DLS PP PNEKLPP  A  S LPEA NG+GFCG     W PPNW   AP G  A         V+PNT P     V+   G  DGV  
Subjt:  LDLLLTFTYFRFDLSPPPAPNEKLPPALALKSKLPEAWNGEGFCGVGTFCWLPPNWKGFAPSGEGA---------VEPNTNPDDGEKVVAGVGKVDGVVE

Query:  TRDPLLRFELVLGELKENKL-GVGVDVDVETDDNNKFPD
          +     EL    + + K+ G  +    E DD  + PD
Subjt:  TRDPLLRFELVLGELKENKL-GVGVDVDVETDDNNKFPD

A0A7J9CPN0 Uncharacterized protein1.5e-1040.28Show/hide
Query:  LDLLLTFTYFRFDLSPPPAPNEKLPPALALKSKLPEAWNGEGFCGVGTFCWLPPNWKGFAPSGEGA---------VEPNTN-----PDDGEKVVAGVGKV
        L  L TFT F  DLS PP PNEKLPP  A  S LPEA NG+GFCG     W PPNW   AP G  A         V+PNT      P+ G   VA   +V
Subjt:  LDLLLTFTYFRFDLSPPPAPNEKLPPALALKSKLPEAWNGEGFCGVGTFCWLPPNWKGFAPSGEGA---------VEPNTN-----PDDGEKVVAGVGKV

Query:  DGVVETRDPLLRFELVLGELKENKLGVGVDVDVETDDNNKFPDV
        +  +E  +  +    ++GEL    LG   +VD   ++ +  P+V
Subjt:  DGVVETRDPLLRFELVLGELKENKLGVGVDVDVETDDNNKFPDV

A0A7J9MNS0 Uncharacterized protein9.0e-1140.28Show/hide
Query:  LDLLLTFTYFRFDLSPPPAPNEKLPPALALKSKLPEAWNGEGFCGVGTFCWLPPNWKGFAPSGEGA---------VEPNTN-----PDDGEKVVAGVGKV
        L  L TFT F  DLS PP PNEKLPP  A  S LPEA NG+GFCG     W PPNW   AP G  A         V+PNT      P+ G   VA   +V
Subjt:  LDLLLTFTYFRFDLSPPPAPNEKLPPALALKSKLPEAWNGEGFCGVGTFCWLPPNWKGFAPSGEGA---------VEPNTN-----PDDGEKVVAGVGKV

Query:  DGVVETRDPLLRFELVLGELKENKLGVGVDVDVETDDNNKFPDV
        +  +E  + L+    ++G L    LG   +VD   ++ +  P+V
Subjt:  DGVVETRDPLLRFELVLGELKENKLGVGVDVDVETDDNNKFPDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAATAACTGGGATATAGAAACACAAAAGGAAAAACCGAATACCTTCTCTCTAGATTCCTACTACTTCTTTCTTGATTTGCTTTTAACTTTCACATATTTT
CGGTTCGATTTGTCGCCGCCACCAGCGCCCAATGAGAAGCTCCCTCCAGCACTGGCATTGAAGTCTAAGCTACCAGAAGCTTGGAATGGGGAGGGATTCTGTGGG
GTAGGTACATTTTGCTGGCTACCACCAAATTGGAAAGGATTCGCTCCTAGCGGAGAAGGAGCTGTTGAACCAAATACAAACCCTGATGATGGAGAAAAAGTGGTG
GCTGGGGTGGGAAAAGTAGATGGAGTAGTAGAAACAAGAGATCCGTTGTTGAGATTTGAATTAGTGCTAGGGGAGCTAAAAGAAAACAAACTCGGAGTTGGTGTT
GATGTTGATGTTGAGACAGATGACAATAACAAATTCCCAGATGTACCAACTGCGAGACCAGCATCCGAGCTCTTATCGCCAGATTTCTCTGACATAGACTCTTTT
GGAACTCCAAATGACAGGATGCTGCAATTAAAACCGTACAAAACATTAGTTACTAGTACATTTCGTAAAGCACCAAAAGTATCGCTTAGAAACAGACTGCCCATT
TATCATTGGAAGGTGAATGATGGAAAATCAAAAGAATGTGTCAATATTTTCTATATCCTAAAGCCCAAGCAGAGGCATAAACATATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAATAACTGGGATATAGAAACACAAAAGGAAAAACCGAATACCTTCTCTCTAGATTCCTACTACTTCTTTCTTGATTTGCTTTTAACTTTCACATATTTT
CGGTTCGATTTGTCGCCGCCACCAGCGCCCAATGAGAAGCTCCCTCCAGCACTGGCATTGAAGTCTAAGCTACCAGAAGCTTGGAATGGGGAGGGATTCTGTGGG
GTAGGTACATTTTGCTGGCTACCACCAAATTGGAAAGGATTCGCTCCTAGCGGAGAAGGAGCTGTTGAACCAAATACAAACCCTGATGATGGAGAAAAAGTGGTG
GCTGGGGTGGGAAAAGTAGATGGAGTAGTAGAAACAAGAGATCCGTTGTTGAGATTTGAATTAGTGCTAGGGGAGCTAAAAGAAAACAAACTCGGAGTTGGTGTT
GATGTTGATGTTGAGACAGATGACAATAACAAATTCCCAGATGTACCAACTGCGAGACCAGCATCCGAGCTCTTATCGCCAGATTTCTCTGACATAGACTCTTTT
GGAACTCCAAATGACAGGATGCTGCAATTAAAACCGTACAAAACATTAGTTACTAGTACATTTCGTAAAGCACCAAAAGTATCGCTTAGAAACAGACTGCCCATT
TATCATTGGAAGGTGAATGATGGAAAATCAAAAGAATGTGTCAATATTTTCTATATCCTAAAGCCCAAGCAGAGGCATAAACATATCTGA
Protein sequenceShow/hide protein sequence
MKNNWDIETQKEKPNTFSLDSYYFFLDLLLTFTYFRFDLSPPPAPNEKLPPALALKSKLPEAWNGEGFCGVGTFCWLPPNWKGFAPSGEGAVEPNTNPDDGEKVV
AGVGKVDGVVETRDPLLRFELVLGELKENKLGVGVDVDVETDDNNKFPDVPTARPASELLSPDFSDIDSFGTPNDRMLQLKPYKTLVTSTFRKAPKVSLRNRLPI
YHWKVNDGKSKECVNIFYILKPKQRHKHI