CuGenDBv2

Gene ID	HG10004132
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	40S ribosomal protein S25
Genome location	Chr08:13984418..13986157
RNA-Seq Expression	HG10004132
Synteny	HG10004132
Gene Ontology terms	GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR004977 - Ribosomal protein S25

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004140903.1 40S ribosomal protein S25-2 [Cucumis sativus]

4.7e-46

94.44

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSE PK+KLVTPSILSDR+R+NGSLARRAIKDLMARGSIRMISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRSTNT
        IYTR+TNT
Subjt:  IYTRSTNT

XP_004291591.1 PREDICTED: 40S ribosomal protein S25-2 [Fragaria vesca subsp. vesca]

2.7e-46

95.37

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Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSEAPKFKL+TPSILSDRLRINGSLARRAIKDLMARGSIRMISAH+SQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRSTNT
        IYTR+TNT
Subjt:  IYTRSTNT

XP_008442240.1 PREDICTED: 40S ribosomal protein S25-2 [Cucumis melo]

9.5e-47

96.3

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Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSEAPKFKL+TPSILSDRLRINGSLARRAIKDLMARGSIR+ISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRSTNT
        IYTR+TNT
Subjt:  IYTRSTNT

XP_008456601.1 PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo]

2.1e-46

96.3

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Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSE PK+KLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRSTNT
        IYTR+TNT
Subjt:  IYTRSTNT

XP_022142384.1 40S ribosomal protein S25-2 [Momordica charantia]

4.7e-46

94.44

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNN+VLFDQG+YDKLLSEAPK+KL+TPSILSDRLRINGSLARRAIKDLMARGSIR+ISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRSTNT
        IYTR+TNT
Subjt:  IYTRSTNT

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B608 40S ribosomal protein S25

4.6e-47

96.3

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSEAPKFKL+TPSILSDRLRINGSLARRAIKDLMARGSIR+ISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRSTNT
        IYTR+TNT
Subjt:  IYTRSTNT

A0A1S3C4W3 40S ribosomal protein S25

1.0e-46

96.3

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSE PK+KLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRSTNT
        IYTR+TNT
Subjt:  IYTRSTNT

A0A2N9J628 40S ribosomal protein S25

1.7e-46

94.44

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSEAPKFKL+TPSILSDRLRINGSLARRAI+DLMARGSIRM+S HSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRSTNT
        IYTR+TNT
Subjt:  IYTRSTNT

A0A5D3CKR9 40S ribosomal protein S25

1.0e-46

96.3

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSE PK+KLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRSTNT
        IYTR+TNT
Subjt:  IYTRSTNT

A0A6J1BYI5 40S ribosomal protein S25

1.0e-46

96.3

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSE PK+KLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRSTNT
        IYTR+TNT
Subjt:  IYTRSTNT

SwissProt top hits

e value

%identity

Alignment

P46301 40S ribosomal protein S25

3.2e-45

87.04

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKK +APPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD+ +YDKLLSEAPK+KL+TPS+LSDRLRI+GSLAR+AI+DLMARGSIRM+SAH+SQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRSTNT
        IYTR+TNT
Subjt:  IYTRSTNT

Q8GYL5 40S ribosomal protein S25-3

4.9e-46

89.72

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ +YDKLLSEAPKFKL+TPSILSDRLRINGSLARRAI++LMA+G+IRM+SAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRSTN
        IYTR+T+
Subjt:  IYTRSTN

Q9SIK2 40S ribosomal protein S25-2

5.8e-47

89.81

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLL+EAPKFKL+TPSILSDR+RINGSLARRAI++LMA+G IRM+SAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRSTNT
        IYTR+TNT
Subjt:  IYTRSTNT

Q9SIW5 40S ribosomal protein S25-1

6.0e-44

86.79

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ +YDKL+SEAPKFKL+TPSILSDRLRINGSLAR+AI+DLM +G+IRM+S HSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRST
        I TR+T
Subjt:  IYTRST

Q9T029 40S ribosomal protein S25-4

6.4e-46

87.96

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ +YDKLL+EAPKFKL+TPSILSDR+RINGSLARRAI++LMA+G IRM++AHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRSTNT
        IYTR+TNT
Subjt:  IYTRSTNT

Arabidopsis top hits

e value

%identity

Alignment

AT2G21580.1 Ribosomal protein S25 family protein

4.1e-48

89.81

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLL+EAPKFKL+TPSILSDR+RINGSLARRAI++LMA+G IRM+SAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRSTNT
        IYTR+TNT
Subjt:  IYTRSTNT

AT2G21580.2 Ribosomal protein S25 family protein

2.9e-46

88.89

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQG+YDKLL+EAPKFKL+TPSILSDR+RINGSLARRAI++LMA+G IRM+SAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRSTNT
        IYTR+TNT
Subjt:  IYTRSTNT

AT4G34555.1 Ribosomal protein S25 family protein

3.5e-47

89.72

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ +YDKLLSEAPKFKL+TPSILSDRLRINGSLARRAI++LMA+G+IRM+SAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRSTN
        IYTR+T+
Subjt:  IYTRSTN

AT4G39200.1 Ribosomal protein S25 family protein

4.5e-47

87.96

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ +YDKLL+EAPKFKL+TPSILSDR+RINGSLARRAI++LMA+G IRM++AHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRSTNT
        IYTR+TNT
Subjt:  IYTRSTNT

AT4G39200.2 Ribosomal protein S25 family protein

3.2e-45

87.04

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ +YDKLL+EAPKFKL+TPSILSDR+RINGSLARRAI++LMA+G IRM++AHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRSTNT
        IYTR+TNT
Subjt:  IYTRSTNT

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGCCGAAGAAGGACAAGGCTCCTCCACCGTCCTCCAAGCCCGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAATGGAGTAAGGGTAAGCAAAAGGAGAAGGT
GAACAACATGGTTTTGTTTGATCAGGGAAGTTATGATAAGCTCCTTTCTGAAGCTCCCAAGTTCAAGCTAGTCACTCCTTCTATTCTTTCTGATAGATTGAGGATCAATG
GATCACTAGCACGAAGAGCAATTAAGGATTTGATGGCACGAGGTTCCATCAGAATGATCTCAGCTCACTCCAGTCAGCAGATCTACACCAGATCAACCAACACCTAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRSTNT

HG10004132 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome