; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10004142 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004142
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRING-type domain-containing protein
Genome locationChr08:14142261..14146392
RNA-Seq ExpressionHG10004142
SyntenyHG10004142
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032948.1 RING-H2 finger protein ATL7 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-9685.2Show/hide
Query:  MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLR
        MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSDLSGLERG HGVEP VVANFPTKKYSD+YFSSMRNAQCTVCLADYHSEDLLR
Subjt:  MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLR

Query:  ILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENSGLEQPMEENQCSPGANGAADLIENA
        ILPYCGHFFHVTCIDIWLH+HSTCPVCR SLREVPDKKRT+QPLFSSAIRS   LNSD    PC GFPL D EN+GLE P++ENQ    AN AAD IENA
Subjt:  ILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENSGLEQPMEENQCSPGANGAADLIENA

Query:  SSFIEGNQNSKSSRNKNIESPSN
        SSF EGN NSK SRNKN+ SPSN
Subjt:  SSFIEGNQNSKSSRNKNIESPSN

XP_004140896.1 RING-H2 finger protein ATL8 [Cucumis sativus]3.9e-10891.67Show/hide
Query:  MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLR
        MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSM+NAQCTVCLADYHSEDLLR
Subjt:  MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLR

Query:  ILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENSGLEQPMEENQCSPGANGAADLIENASSFIEGN
        ILPYCGH FHV CIDIWLHQHSTCPVCRLSLREV DKKRTMQPLFSSAIR+LNSDPCRGFPLRDLEN+GLEQP++EN  + G NGAAD IENAS FIEGN
Subjt:  ILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENSGLEQPMEENQCSPGANGAADLIENASSFIEGN

Query:  QNSKSSRNKNIESPSN
        QNSK  RNKN+ESPSN
Subjt:  QNSKSSRNKNIESPSN

XP_008456580.1 PREDICTED: RING-H2 finger protein ATL8-like [Cucumis melo]1.6e-10992.59Show/hide
Query:  MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLR
        MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKY+DDYFSSMRNAQCTVCLADYHSEDLLR
Subjt:  MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLR

Query:  ILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENSGLEQPMEENQCSPGANGAADLIENASSFIEGN
        ILPYCGH FHV CIDIWLHQHSTCPVCRLSLREV DKKRTMQPLFSSAIRSLNSDPCRGFPLRDLEN+GLEQP++EN  +PGANGA D IENAS FIEGN
Subjt:  ILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENSGLEQPMEENQCSPGANGAADLIENASSFIEGN

Query:  QNSKSSRNKNIESPSN
        QNSK  RNKN+ESPSN
Subjt:  QNSKSSRNKNIESPSN

XP_022990455.1 RING-H2 finger protein ATL74-like [Cucurbita maxima]9.0e-9785.2Show/hide
Query:  MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLR
        MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHL+ASRRSF +ASRSDLSGLERG HGVEP VVANFPTKKYSD+YFSSMRNAQCTVCLADYHSEDLLR
Subjt:  MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLR

Query:  ILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENSGLEQPMEENQCSPGANGAADLIENA
        ILPYCGH FHVTCIDIWLH+HSTCPVCR SLREVPDKKRT+QPLFSSAIRS   LNSD    PC GFPL D EN+GLE P++ENQ    ANGAAD IENA
Subjt:  ILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENSGLEQPMEENQCSPGANGAADLIENA

Query:  SSFIEGNQNSKSSRNKNIESPSN
        SSF EGN NSK SRNKN+ESPSN
Subjt:  SSFIEGNQNSKSSRNKNIESPSN

XP_038886584.1 RING-H2 finger protein ATL74-like [Benincasa hispida]6.4e-11193.06Show/hide
Query:  MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLR
        MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKY+DDYFSSMRNAQCTVCLADYHSEDLLR
Subjt:  MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLR

Query:  ILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENSGLEQPMEENQCSPGANGAADLIENASSFIEGN
        ILP+CGH FHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSL+SDPCRGFPLRDL+NSGLEQP++EN C+ GANGAAD IENA+SFIEGN
Subjt:  ILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENSGLEQPMEENQCSPGANGAADLIENASSFIEGN

Query:  QNSKSSRNKNIESPSN
        QNSK  RNKN+ESPSN
Subjt:  QNSKSSRNKNIESPSN

TrEMBL top hitse value%identityAlignment
A0A0A0KB30 RING-type domain-containing protein1.9e-10891.67Show/hide
Query:  MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLR
        MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSM+NAQCTVCLADYHSEDLLR
Subjt:  MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLR

Query:  ILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENSGLEQPMEENQCSPGANGAADLIENASSFIEGN
        ILPYCGH FHV CIDIWLHQHSTCPVCRLSLREV DKKRTMQPLFSSAIR+LNSDPCRGFPLRDLEN+GLEQP++EN  + G NGAAD IENAS FIEGN
Subjt:  ILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENSGLEQPMEENQCSPGANGAADLIENASSFIEGN

Query:  QNSKSSRNKNIESPSN
        QNSK  RNKN+ESPSN
Subjt:  QNSKSSRNKNIESPSN

A0A1S3C364 RING-H2 finger protein ATL8-like7.6e-11092.59Show/hide
Query:  MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLR
        MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKY+DDYFSSMRNAQCTVCLADYHSEDLLR
Subjt:  MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLR

Query:  ILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENSGLEQPMEENQCSPGANGAADLIENASSFIEGN
        ILPYCGH FHV CIDIWLHQHSTCPVCRLSLREV DKKRTMQPLFSSAIRSLNSDPCRGFPLRDLEN+GLEQP++EN  +PGANGA D IENAS FIEGN
Subjt:  ILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENSGLEQPMEENQCSPGANGAADLIENASSFIEGN

Query:  QNSKSSRNKNIESPSN
        QNSK  RNKN+ESPSN
Subjt:  QNSKSSRNKNIESPSN

A0A5D3CKS4 RING-H2 finger protein ATL8-like7.6e-11092.59Show/hide
Query:  MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLR
        MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKY+DDYFSSMRNAQCTVCLADYHSEDLLR
Subjt:  MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLR

Query:  ILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENSGLEQPMEENQCSPGANGAADLIENASSFIEGN
        ILPYCGH FHV CIDIWLHQHSTCPVCRLSLREV DKKRTMQPLFSSAIRSLNSDPCRGFPLRDLEN+GLEQP++EN  +PGANGA D IENAS FIEGN
Subjt:  ILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENSGLEQPMEENQCSPGANGAADLIENASSFIEGN

Query:  QNSKSSRNKNIESPSN
        QNSK  RNKN+ESPSN
Subjt:  QNSKSSRNKNIESPSN

A0A6J1H8I0 RING-H2 finger protein ATL74-like4.8e-9684.75Show/hide
Query:  MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLR
        MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSDLSGLERG HGVEP VVANFPTKKYSD+YFSSMRNAQCTVCLADY+SEDLLR
Subjt:  MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLR

Query:  ILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENSGLEQPMEENQCSPGANGAADLIENA
        ILPYCGH FHVTCIDIWLH+HSTCPVCR SLREVPDKKRT+QPLFSSAIRS   LNSD    PC GFPL D EN+GLE P++ENQ    ANGAAD IENA
Subjt:  ILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENSGLEQPMEENQCSPGANGAADLIENA

Query:  SSFIEGNQNSKSSRNKNIESPSN
        SSF EGN NSK SRNKN+ SPSN
Subjt:  SSFIEGNQNSKSSRNKNIESPSN

A0A6J1JQ55 RING-H2 finger protein ATL74-like4.3e-9785.2Show/hide
Query:  MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLR
        MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHL+ASRRSF +ASRSDLSGLERG HGVEP VVANFPTKKYSD+YFSSMRNAQCTVCLADYHSEDLLR
Subjt:  MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLR

Query:  ILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENSGLEQPMEENQCSPGANGAADLIENA
        ILPYCGH FHVTCIDIWLH+HSTCPVCR SLREVPDKKRT+QPLFSSAIRS   LNSD    PC GFPL D EN+GLE P++ENQ    ANGAAD IENA
Subjt:  ILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENSGLEQPMEENQCSPGANGAADLIENA

Query:  SSFIEGNQNSKSSRNKNIESPSN
        SSF EGN NSK SRNKN+ESPSN
Subjt:  SSFIEGNQNSKSSRNKNIESPSN

SwissProt top hitse value%identityAlignment
O64762 RING-H2 finger protein ATL385.2e-1528.87Show/hide
Query:  LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF---PIASRSDLSGLERGLHGVEPMVVANFPTKKYSD--DYFSSMRNAQCTVCLADYHSEDLLRI
        LV+T+I F +  + +  VC R    + +   S   F    + SR+ ++     + G++  ++ +FPT  YS+  +    +   +C VC+ ++   + LR+
Subjt:  LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF---PIASRSDLSGLERGLHGVEPMVVANFPTKKYSD--DYFSSMRNAQCTVCLADYHSEDLLRI

Query:  LPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQP
        +P C H FH  C+ +WL  HSTCP+CR+ L   P ++  + P
Subjt:  LPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQP

P0C034 RING-H2 finger protein ATL102.0e-1435.88Show/hide
Query:  VSTLFIVFVCTRLVCARIH------LNASRR---SFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLRILPYCG
        V  L  + +C  + C  +H      L  S R   S P+ S S   G      G++   +  FP   YS +      + +C +CL+D+ S + LR+LP C 
Subjt:  VSTLFIVFVCTRLVCARIH------LNASRR---SFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLRILPYCG

Query:  HFFHVTCIDIWLHQHSTCPVCRLSLREVPDK
        H FHV CID WL QH TCP CR  L E   K
Subjt:  HFFHVTCIDIWLHQHSTCPVCRLSLREVPDK

Q8L9T5 RING-H2 finger protein ATL21.2e-1434.69Show/hide
Query:  GVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLNSDP
        G++P V+ + P   +SD+  +     +C VCL+++   +  R+LP C H FHV CID+W H HSTCP+CR  +  +   + T        + +++SDP
Subjt:  GVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLNSDP

Q8W571 RING-H2 finger protein ATL321.5e-1434.09Show/hide
Query:  TVIGFTVSTLFIVFVCTRLV--CARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSM--RNAQCTVCLADYHSEDLLRILPYC
        TV    V+  F+  + +  +  CAR + ++S R F   +R++     RG  G++  VV +FP   YS    S +  ++ +C +CL +    + +R+LP C
Subjt:  TVIGFTVSTLFIVFVCTRLV--CARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSM--RNAQCTVCLADYHSEDLLRILPYC

Query:  GHFFHVTCIDIWLHQHSTCPVCRLSLREVPDK
         H FH+ CID WL+ H+TCPVCR +L    +K
Subjt:  GHFFHVTCIDIWLHQHSTCPVCRLSLREVPDK

Q9SN27 E3 ubiquitin-protein ligase ATL596.8e-1537.86Show/hide
Query:  GLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPL-FSSAIR
        GL + +  + P+V+       Y + +  ++ + QC+VCL DY +E+ L+ +P CGH FH+ CID+WL  H+TCP+CRLSL   P    + Q +   S+I 
Subjt:  GLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPL-FSSAIR

Query:  SLN
        + N
Subjt:  SLN

Arabidopsis top hitse value%identityAlignment
AT1G49220.1 RING/U-box superfamily protein1.4e-1535.88Show/hide
Query:  VSTLFIVFVCTRLVCARIH------LNASRR---SFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLRILPYCG
        V  L  + +C  + C  +H      L  S R   S P+ S S   G      G++   +  FP   YS +      + +C +CL+D+ S + LR+LP C 
Subjt:  VSTLFIVFVCTRLVCARIH------LNASRR---SFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLRILPYCG

Query:  HFFHVTCIDIWLHQHSTCPVCRLSLREVPDK
        H FHV CID WL QH TCP CR  L E   K
Subjt:  HFFHVTCIDIWLHQHSTCPVCRLSLREVPDK

AT2G34990.1 RING/U-box superfamily protein3.7e-1628.87Show/hide
Query:  LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF---PIASRSDLSGLERGLHGVEPMVVANFPTKKYSD--DYFSSMRNAQCTVCLADYHSEDLLRI
        LV+T+I F +  + +  VC R    + +   S   F    + SR+ ++     + G++  ++ +FPT  YS+  +    +   +C VC+ ++   + LR+
Subjt:  LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF---PIASRSDLSGLERGLHGVEPMVVANFPTKKYSD--DYFSSMRNAQCTVCLADYHSEDLLRI

Query:  LPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQP
        +P C H FH  C+ +WL  HSTCP+CR+ L   P ++  + P
Subjt:  LPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQP

AT3G16720.1 TOXICOS EN LEVADURA 28.3e-1634.69Show/hide
Query:  GVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLNSDP
        G++P V+ + P   +SD+  +     +C VCL+++   +  R+LP C H FHV CID+W H HSTCP+CR  +  +   + T        + +++SDP
Subjt:  GVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLNSDP

AT4G10160.1 RING/U-box superfamily protein4.9e-1637.86Show/hide
Query:  GLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPL-FSSAIR
        GL + +  + P+V+       Y + +  ++ + QC+VCL DY +E+ L+ +P CGH FH+ CID+WL  H+TCP+CRLSL   P    + Q +   S+I 
Subjt:  GLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPL-FSSAIR

Query:  SLN
        + N
Subjt:  SLN

AT4G40070.1 RING/U-box superfamily protein1.1e-1534.09Show/hide
Query:  TVIGFTVSTLFIVFVCTRLV--CARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSM--RNAQCTVCLADYHSEDLLRILPYC
        TV    V+  F+  + +  +  CAR + ++S R F   +R++     RG  G++  VV +FP   YS    S +  ++ +C +CL +    + +R+LP C
Subjt:  TVIGFTVSTLFIVFVCTRLV--CARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSM--RNAQCTVCLADYHSEDLLRILPYC

Query:  GHFFHVTCIDIWLHQHSTCPVCRLSLREVPDK
         H FH+ CID WL+ H+TCPVCR +L    +K
Subjt:  GHFFHVTCIDIWLHQHSTCPVCRLSLREVPDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCAGGGGTGAACTTGGTGATGACAGTGATTGGATTCACAGTGAGCACTTTGTTCATCGTGTTCGTCTGTACAAGGCTTGTTTGTGCTAGGATTCATCTCAATGC
TTCAAGGCGATCCTTCCCAATCGCTTCTAGATCCGATCTCAGTGGGTTGGAACGGGGATTACACGGTGTAGAGCCTATGGTTGTAGCCAACTTTCCAACTAAGAAGTACA
GTGATGATTACTTCTCATCTATGAGAAATGCTCAATGCACAGTTTGCTTGGCAGATTATCATAGTGAAGACTTATTGCGCATTCTTCCCTACTGTGGACACTTCTTCCAT
GTAACCTGCATAGACATATGGCTGCATCAACACTCAACATGCCCGGTTTGTCGTCTATCGTTACGTGAGGTCCCAGACAAGAAACGAACAATGCAACCCTTGTTTAGCTC
AGCAATTCGCTCTCTCAACTCAGATCCCTGCCGTGGGTTCCCTTTAAGAGACCTCGAAAACAGTGGGTTGGAACAACCAATGGAAGAGAATCAATGCTCACCTGGGGCCA
ATGGAGCAGCGGATTTGATAGAGAACGCTTCCTCATTTATCGAAGGTAACCAGAATAGTAAAAGCTCTAGAAACAAAAATATAGAAAGTCCATCAAATGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCAGGGGTGAACTTGGTGATGACAGTGATTGGATTCACAGTGAGCACTTTGTTCATCGTGTTCGTCTGTACAAGGCTTGTTTGTGCTAGGATTCATCTCAATGC
TTCAAGGCGATCCTTCCCAATCGCTTCTAGATCCGATCTCAGTGGGTTGGAACGGGGATTACACGGTGTAGAGCCTATGGTTGTAGCCAACTTTCCAACTAAGAAGTACA
GTGATGATTACTTCTCATCTATGAGAAATGCTCAATGCACAGTTTGCTTGGCAGATTATCATAGTGAAGACTTATTGCGCATTCTTCCCTACTGTGGACACTTCTTCCAT
GTAACCTGCATAGACATATGGCTGCATCAACACTCAACATGCCCGGTTTGTCGTCTATCGTTACGTGAGGTCCCAGACAAGAAACGAACAATGCAACCCTTGTTTAGCTC
AGCAATTCGCTCTCTCAACTCAGATCCCTGCCGTGGGTTCCCTTTAAGAGACCTCGAAAACAGTGGGTTGGAACAACCAATGGAAGAGAATCAATGCTCACCTGGGGCCA
ATGGAGCAGCGGATTTGATAGAGAACGCTTCCTCATTTATCGAAGGTAACCAGAATAGTAAAAGCTCTAGAAACAAAAATATAGAAAGTCCATCAAATGTTTGA
Protein sequenceShow/hide protein sequence
MSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYSDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHFFH
VTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENSGLEQPMEENQCSPGANGAADLIENASSFIEGNQNSKSSRNKNIESPSNV