; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10004144 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004144
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRRM domain-containing protein
Genome locationChr08:14163014..14165170
RNA-Seq ExpressionHG10004144
SyntenyHG10004144
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140894.1 uncharacterized RNA-binding protein C1827.05c [Cucumis sativus]3.4e-10994.34Show/hide
Query:  MGAKAKKAMKKKLNKAISLSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFE
        MGAKA+KAMKKKLNKA  LSSDKKESADFLPLEGGPGRKL  QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARN+KTGKS+HFGYVEFE
Subjt:  MGAKAKKAMKKKLNKAISLSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYRH PLNWSELERK HNKERTL+EHKKLVDRILKRDQARQKRIRAAGIDYECPEIVG V
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

XP_008456579.1 PREDICTED: uncharacterized RNA-binding protein C1827.05c [Cucumis melo]5.7e-11297.17Show/hide
Query:  MGAKAKKAMKKKLNKAISLSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFE
        MGAKAKKAMKKKL KA  LSSDKKESADFLPLEGGPGRKLP QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYVEFE
Subjt:  MGAKAKKAMKKKLNKAISLSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTL EHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

XP_022922397.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita moschata]5.9e-10993.87Show/hide
Query:  MGAKAKKAMKKKLNKAISLSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFE
        MGAKAKKAMKKKLNKA SL S+KKESADFLPLEGGPGRKLPAQKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGY+EF+
Subjt:  MGAKAKKAMKKKLNKAISLSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRH PLNWSELERK+HNKERTL EH+KLV+RILKR+QARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

XP_022993750.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita maxima]4.5e-10993.4Show/hide
Query:  MGAKAKKAMKKKLNKAISLSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFE
        MGAKAKKAMKKKL+KA S  SDKKESADFLPLEGGPGRKLPAQKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKR+RIARNRKTGKSRHFGY+EFE
Subjt:  MGAKAKKAMKKKLNKAISLSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEH+LKVHLI+PEHVHPKLWKGFNYRH PL+WSELERKQHNKERTLDEHKKLV+RILKRDQAR+KRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QP PKKIKFDED
Subjt:  QPTPKKIKFDED

XP_038885284.1 MKI67 FHA domain-interacting nucleolar phosphoprotein [Benincasa hispida]2.8e-11195.75Show/hide
Query:  MGAKAKKAMKKKLNKAISLSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFE
        MGAKAKKAMKKKL+KA SLS  K+ESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGY+EFE
Subjt:  MGAKAKKAMKKKLNKAISLSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRI+KRDQARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QP PKKIKFDED
Subjt:  QPTPKKIKFDED

TrEMBL top hitse value%identityAlignment
A0A0A0KCE3 RRM domain-containing protein1.7e-10994.34Show/hide
Query:  MGAKAKKAMKKKLNKAISLSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFE
        MGAKA+KAMKKKLNKA  LSSDKKESADFLPLEGGPGRKL  QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARN+KTGKS+HFGYVEFE
Subjt:  MGAKAKKAMKKKLNKAISLSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYRH PLNWSELERK HNKERTL+EHKKLVDRILKRDQARQKRIRAAGIDYECPEIVG V
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A1S3C4U7 uncharacterized RNA-binding protein C1827.05c2.7e-11297.17Show/hide
Query:  MGAKAKKAMKKKLNKAISLSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFE
        MGAKAKKAMKKKL KA  LSSDKKESADFLPLEGGPGRKLP QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYVEFE
Subjt:  MGAKAKKAMKKKLNKAISLSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTL EHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A6J1E350 uncharacterized RNA-binding protein C1827.05c-like2.8e-10993.87Show/hide
Query:  MGAKAKKAMKKKLNKAISLSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFE
        MGAKAKKAMKKKLNKA SL S+KKESADFLPLEGGPGRKLPAQKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGY+EF+
Subjt:  MGAKAKKAMKKKLNKAISLSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRH PLNWSELERK+HNKERTL EH+KLV+RILKR+QARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A6J1FJK1 uncharacterized RNA-binding protein C1827.05c-like1.3e-10691.51Show/hide
Query:  MGAKAKKAMKKKLNKAISLSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFE
        MGAKAKKAMKKKL+K     SDKKESADFLPLEGGPGRKLPAQKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKR+RIARNRKTGKSRHFGY+EFE
Subjt:  MGAKAKKAMKKKLNKAISLSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEH+LKVHLI+PEHVHPKLWKGF+Y H PL+WSELERKQHNKERTLDEHKKLV RILKRDQAR+KRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QP PKKIKFDED
Subjt:  QPTPKKIKFDED

A0A6J1JZE0 uncharacterized RNA-binding protein C1827.05c-like2.2e-10993.4Show/hide
Query:  MGAKAKKAMKKKLNKAISLSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFE
        MGAKAKKAMKKKL+KA S  SDKKESADFLPLEGGPGRKLPAQKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKR+RIARNRKTGKSRHFGY+EFE
Subjt:  MGAKAKKAMKKKLNKAISLSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEH+LKVHLI+PEHVHPKLWKGFNYRH PL+WSELERKQHNKERTLDEHKKLV+RILKRDQAR+KRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QP PKKIKFDED
Subjt:  QPTPKKIKFDED

SwissProt top hitse value%identityAlignment
O74978 Uncharacterized RNA-binding protein C1827.05c1.6e-2940Show/hide
Query:  RKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLW
        +K+   K L+    VLY+GR+PHGF+EK+M  +F QFG V RLR++RNRKTG S+H+ ++EFES +VA +VA++MHNYLLY  +L+  +I  + VH  ++
Subjt:  RKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLW

Query:  KGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYE
        KG +     +  + + R QH K  + ++  KL+ R  ++ + ++++++  GI  E
Subjt:  KGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYE

Q3SZM1 MKI67 FHA domain-interacting nucleolar phosphoprotein2.9e-2637.89Show/hide
Query:  RKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLW
        R    Q+  + T  V+Y+G +P   +E ++  +F QFG V R R++R++KTG S+ +G+VEFES +VAKI A++M+NYL  E +LK H I PE VH +L+
Subjt:  RKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLW

Query:  KGFNYRHTPLNWSELER-KQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIV
        + +   H P         K++N+ R+L +  ++ +R  K+++  +KR+   GIDY  P +V
Subjt:  KGFNYRHTPLNWSELER-KQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIV

Q6GL69 MKI67 FHA domain-interacting nucleolar phosphoprotein-like2.6e-2744.06Show/hide
Query:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSE
        V+YIG IP   +E ++  +F QFG V RLR++R++KTG S+ + YVEFE  EVAKIVAD+M+NYL  E +LK   + PE VHP+L+ G   +        
Subjt:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSE

Query:  LERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECP
        + R  +NK R+  E KK+  R+L ++   +KR+   GIDY+ P
Subjt:  LERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECP

Q7SYS2 MKI67 FHA domain-interacting nucleolar phosphoprotein-like6.9e-2840.91Show/hide
Query:  LSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLY
        LS D K   DF        RK   +K    T  V+YIG IP    E +++ +F QFG V RLR++R++KTG S+ + YVE+E  EVAKIVAD+M+NYL  
Subjt:  LSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLY

Query:  EHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECP
        E +LK   + PE VHP+L+ G N R        + R  +N +R  +E KK+  R++ ++   +KR+   GIDY+ P
Subjt:  EHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECP

Q8JIY8 MKI67 FHA domain-interacting nucleolar phosphoprotein2.8e-2944.3Show/hide
Query:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSE
        VLY+G +P G FE +++ +F QFGKV RLR++R++KTG S+ +G+VEFE  EVAKIVA++M+NYL+ E I+K H+I PE VH KL+ G         +  
Subjt:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSE

Query:  LERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        + R  +NK  T D+ KK+  ++L ++   +KR+ A GIDY+ P     +
Subjt:  LERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Arabidopsis top hitse value%identityAlignment
AT3G07810.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.3e-0737.68Show/hide
Query:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHN
        ++S    L+IG I     E+ ++ +F  FG+V    I ++R TG++R FG+V F  P VA+IV    HN
Subjt:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHN

AT3G07810.2 RNA-binding (RRM/RBD/RNP motifs) family protein5.3e-0737.68Show/hide
Query:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHN
        ++S    L+IG I     E+ ++ +F  FG+V    I ++R TG++R FG+V F  P VA+IV    HN
Subjt:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHN

AT4G26650.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.1e-0729.09Show/hide
Query:  PAQKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMH-----------------NYLLYEHI
        P ++ +ES + +  L+IG I     E+ ++ +FG++G +    I R+R TG++R FG++ F  P VA+ V    H                   +L  H 
Subjt:  PAQKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMH-----------------NYLLYEHI

Query:  LKVHLIAPEH
          +HLI+P H
Subjt:  LKVHLIAPEH

AT4G26650.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-0628.7Show/hide
Query:  QKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMH-----------------NYLLYEHILK
        ++ +ES + +  L+IG I     E+ ++ +FG++G +    I R+R TG++R FG++ F  P VA+ V    H                   +L  H   
Subjt:  QKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMH-----------------NYLLYEHILK

Query:  VHLIAPEH
        +HLI+P H
Subjt:  VHLIAPEH

AT5G04600.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.5e-7359.73Show/hide
Query:  MGAKAKKAMKKKLNKA--------ISLSSDKKESADFLPLEGGPGRKLP-AQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKS
        MGAKAKKA+KK + K         + L  + K SADFLPLEGGP RK P    PL++ ATVLYIGRIPHGF+E E+E FF QFG VKR+R+ARN+KTGKS
Subjt:  MGAKAKKAMKKKLNKA--------ISLSSDKKESADFLPLEGGPGRKLP-AQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKS

Query:  RHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDY
        +HFG+++FE PEVA+I A +M++YLL EH+LKVH+I PE+V P LW+GF     P++  ++ER+Q NKERTL+EH+K++ +I+K+DQ R+KRI AAGI+Y
Subjt:  RHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDY

Query:  ECPEIVGSVQPTPKKIKFDED
        ECPE+VG+ QP PK+IKF E+
Subjt:  ECPEIVGSVQPTPKKIKFDED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTAAGGCGAAGAAAGCTATGAAGAAGAAACTCAACAAGGCTATTTCTCTCTCATCCGACAAGAAGGAATCTGCCGATTTCTTGCCGTTGGAGGGTGGTCCTGG
GCGTAAGTTACCGGCACAGAAGCCACTGGAAAGTACTGCTACTGTTCTCTACATTGGTCGCATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGTTTTTTCGGACAGT
TTGGGAAAGTCAAAAGATTAAGAATTGCACGAAATAGAAAGACCGGGAAGTCGAGGCATTTTGGCTACGTTGAATTTGAATCCCCAGAGGTAGCAAAAATTGTAGCTGAT
TCCATGCATAACTATTTGTTGTATGAACACATTCTGAAAGTCCATCTAATTGCTCCCGAGCATGTTCACCCCAAACTATGGAAAGGTTTTAACTATCGCCACACGCCCTT
AAATTGGTCTGAACTCGAGCGTAAGCAGCATAACAAGGAAAGGACATTGGATGAGCACAAGAAGTTGGTGGACAGAATCTTGAAGCGGGATCAGGCGAGACAGAAGAGGA
TAAGAGCTGCTGGGATTGATTATGAGTGTCCGGAAATTGTGGGTAGTGTCCAACCAACTCCCAAGAAGATCAAGTTCGATGAAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCTAAGGCGAAGAAAGCTATGAAGAAGAAACTCAACAAGGCTATTTCTCTCTCATCCGACAAGAAGGAATCTGCCGATTTCTTGCCGTTGGAGGGTGGTCCTGG
GCGTAAGTTACCGGCACAGAAGCCACTGGAAAGTACTGCTACTGTTCTCTACATTGGTCGCATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGTTTTTTCGGACAGT
TTGGGAAAGTCAAAAGATTAAGAATTGCACGAAATAGAAAGACCGGGAAGTCGAGGCATTTTGGCTACGTTGAATTTGAATCCCCAGAGGTAGCAAAAATTGTAGCTGAT
TCCATGCATAACTATTTGTTGTATGAACACATTCTGAAAGTCCATCTAATTGCTCCCGAGCATGTTCACCCCAAACTATGGAAAGGTTTTAACTATCGCCACACGCCCTT
AAATTGGTCTGAACTCGAGCGTAAGCAGCATAACAAGGAAAGGACATTGGATGAGCACAAGAAGTTGGTGGACAGAATCTTGAAGCGGGATCAGGCGAGACAGAAGAGGA
TAAGAGCTGCTGGGATTGATTATGAGTGTCCGGAAATTGTGGGTAGTGTCCAACCAACTCCCAAGAAGATCAAGTTCGATGAAGATTAG
Protein sequenceShow/hide protein sequence
MGAKAKKAMKKKLNKAISLSSDKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVAD
SMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSVQPTPKKIKFDED