; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10004159 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004159
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR1-like
Genome locationChr08:14307595..14307966
RNA-Seq ExpressionHG10004159
SyntenyHG10004159
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456553.1 PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo]1.1e-5695.04Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNF
        MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNI  S SDHDSDLDRR CRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNF
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNF

Query:  FRSAYDLEASSTAPPKRTCCR
        FRSAYDLE+SSTAPPKR CCR
Subjt:  FRSAYDLEASSTAPPKRTCCR

XP_011649858.1 cyclin-dependent protein kinase inhibitor SMR1 [Cucumis sativus]3.3e-5694.21Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNF
        MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNI  S SDHDSDLDRR CRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNF
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNF

Query:  FRSAYDLEASSTAPPKRTCCR
        FRSAYDLE+S TAPPKR+CCR
Subjt:  FRSAYDLEASSTAPPKRTCCR

XP_022990487.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima]4.8e-5590.24Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHD-SDLDRRGCRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDN
        MSMDLEFP+NLPKIRLPLQVRSPPKPS S NIPSS SDHD +DLD RGCRTPTSAEHKIPKI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VNQEEVDN
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHD-SDLDRRGCRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDN

Query:  FFRSAYDLEASSTAPPKRTCCRS
        FFRSAYDLEASS APPKR+CCRS
Subjt:  FFRSAYDLEASSTAPPKRTCCRS

XP_023521119.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo]1.3e-5591.06Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHD-SDLDRRGCRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDN
        MSMDLEFP+NLPKIRLPLQVRSPPKPS S NIPSS SDHD +DLD RGCRTPTSAEHKIPKI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VNQEEVDN
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHD-SDLDRRGCRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDN

Query:  FFRSAYDLEASSTAPPKRTCCRS
        FFRSAYDLEASSTAPPKR+CCRS
Subjt:  FFRSAYDLEASSTAPPKRTCCRS

XP_038884240.1 cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida]3.4e-6198.37Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNF
        MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASD DSDLDRR CRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNF
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNF

Query:  FRSAYDLEASSTAPPKRTCCRST
        FRSAYDLEASSTAPPKRTCCRST
Subjt:  FRSAYDLEASSTAPPKRTCCRST

TrEMBL top hitse value%identityAlignment
A0A0A0LSQ6 Uncharacterized protein1.6e-5694.21Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNF
        MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNI  S SDHDSDLDRR CRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNF
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNF

Query:  FRSAYDLEASSTAPPKRTCCR
        FRSAYDLE+S TAPPKR+CCR
Subjt:  FRSAYDLEASSTAPPKRTCCR

A0A1S3C3L4 cyclin-dependent protein kinase inhibitor SMR1-like5.6e-5795.04Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNF
        MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNI  S SDHDSDLDRR CRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNF
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNF

Query:  FRSAYDLEASSTAPPKRTCCR
        FRSAYDLE+SSTAPPKR CCR
Subjt:  FRSAYDLEASSTAPPKRTCCR

A0A5A7UMQ0 Cyclin-dependent protein kinase inhibitor SMR1-like5.6e-5795.04Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNF
        MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNI  S SDHDSDLDRR CRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNF
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNF

Query:  FRSAYDLEASSTAPPKRTCCR
        FRSAYDLE+SSTAPPKR CCR
Subjt:  FRSAYDLEASSTAPPKRTCCR

A0A6J1E540 cyclin-dependent protein kinase inhibitor SMR1-like5.2e-5590.24Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHD-SDLDRRGCRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDN
        MSMDLEFP+NLPKIRLPLQVRSPPKPS S NIPSS SDHD +DLD RGCRTPTSAEHKIPKI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VNQEEVDN
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHD-SDLDRRGCRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDN

Query:  FFRSAYDLEASSTAPPKRTCCRS
        FFRSAYDLEASSTAP KR+CCRS
Subjt:  FFRSAYDLEASSTAPPKRTCCRS

A0A6J1JIW3 cyclin-dependent protein kinase inhibitor SMR1-like2.3e-5590.24Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHD-SDLDRRGCRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDN
        MSMDLEFP+NLPKIRLPLQVRSPPKPS S NIPSS SDHD +DLD RGCRTPTSAEHKIPKI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VNQEEVDN
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHD-SDLDRRGCRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDN

Query:  FFRSAYDLEASSTAPPKRTCCRS
        FFRSAYDLEASS APPKR+CCRS
Subjt:  FFRSAYDLEASSTAPPKRTCCRS

SwissProt top hitse value%identityAlignment
Q9LPP4 Cyclin-dependent protein kinase inhibitor SMR11.4e-0938.17Show/hide
Query:  MDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIPKIL-SCPGAPKKPKRPPV-----------PCKRKL---TMELK
        MDLE  ++L K   P  ++   K S      +   + D D D   C TPTS EHKIP ++ S P  P+KP+ PP             CKRKL   T E+ 
Subjt:  MDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIPKIL-SCPGAPKKPKRPPV-----------PCKRKL---TMELK

Query:  FFEIVNQEEVDNFFRSAYDLEASSTAPPKRT
           I+N+EE+D FF S Y+ E S+TA  +R+
Subjt:  FFEIVNQEEVDNFFRSAYDLEASSTAPPKRT

Q9LZ60 Cyclin-dependent protein kinase inhibitor SMR31.1e-0439.76Show/hide
Query:  QVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIP--KILSCPGAPKKPK-RPPVPCKRKLTMELKFFEIVNQEEVD
        ++R P +P L  +IP S  +  +  +  GC+TPTS++HKIP  K   CP AP+KPK       KRKLT       +VN+  +D
Subjt:  QVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIP--KILSCPGAPKKPK-RPPVPCKRKLTMELKFFEIVNQEEVD

Q9LZ78 Cyclin-dependent protein kinase inhibitor SIM7.8e-0833.33Show/hide
Query:  MDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIPKILSC--PGAPKKPKRPPVP-------CKRKLTMELKFFE-IV
        MDL+  ++LP +  P  ++               ++ + D D  GC TPTS++HKIP   +   P  P+KP+ P  P       CKRKL   L  +E IV
Subjt:  MDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIPKILSC--PGAPKKPKRPPVP-------CKRKLTMELKFFE-IV

Query:  NQEEVDNFFRSAYDLEASST
        N++E++ FF S Y+   +S+
Subjt:  NQEEVDNFFRSAYDLEASST

Q9SGE2 Cyclin-dependent protein kinase inhibitor SMR29.0e-0441.82Show/hide
Query:  TPTSAEHKIPKILSCPGAP-KKPKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF
        TPTS++HKIP++ +CP  P K+P+   +  K +L+ +L+FFE   V  +EV+  F
Subjt:  TPTSAEHKIPKILSCPGAP-KKPKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF

Arabidopsis top hitse value%identityAlignment
AT1G08180.1 unknown protein6.4e-0541.82Show/hide
Query:  TPTSAEHKIPKILSCPGAP-KKPKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF
        TPTS++HKIP++ +CP  P K+P+   +  K +L+ +L+FFE   V  +EV+  F
Subjt:  TPTSAEHKIPKILSCPGAP-KKPKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF

AT3G10525.1 LOSS OF GIANT CELLS FROM ORGANS1.0e-1038.17Show/hide
Query:  MDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIPKIL-SCPGAPKKPKRPPV-----------PCKRKL---TMELK
        MDLE  ++L K   P  ++   K S      +   + D D D   C TPTS EHKIP ++ S P  P+KP+ PP             CKRKL   T E+ 
Subjt:  MDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIPKIL-SCPGAPKKPKRPPV-----------PCKRKL---TMELK

Query:  FFEIVNQEEVDNFFRSAYDLEASSTAPPKRT
           I+N+EE+D FF S Y+ E S+TA  +R+
Subjt:  FFEIVNQEEVDNFFRSAYDLEASSTAPPKRT

AT5G02420.1 unknown protein7.5e-0639.76Show/hide
Query:  QVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIP--KILSCPGAPKKPK-RPPVPCKRKLTMELKFFEIVNQEEVD
        ++R P +P L  +IP S  +  +  +  GC+TPTS++HKIP  K   CP AP+KPK       KRKLT       +VN+  +D
Subjt:  QVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIP--KILSCPGAPKKPK-RPPVPCKRKLTMELKFFEIVNQEEVD

AT5G04470.1 cyclin-dependent protein kinase inhibitors5.6e-0933.33Show/hide
Query:  MDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIPKILSC--PGAPKKPKRPPVP-------CKRKLTMELKFFE-IV
        MDL+  ++LP +  P  ++               ++ + D D  GC TPTS++HKIP   +   P  P+KP+ P  P       CKRKL   L  +E IV
Subjt:  MDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIPKILSC--PGAPKKPKRPPVP-------CKRKLTMELKFFE-IV

Query:  NQEEVDNFFRSAYDLEASST
        N++E++ FF S Y+   +S+
Subjt:  NQEEVDNFFRSAYDLEASST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATGGACCTTGAATTCCCCAAAAATCTCCCCAAAATCCGCCTCCCTTTACAGGTTCGATCCCCTCCCAAACCCTCCCTTTCCGACAACATACCTTCTTCCGCCTC
CGATCACGACTCCGACCTCGACCGCCGCGGCTGCCGGACACCAACCTCCGCCGAGCACAAGATTCCCAAGATCCTCAGCTGTCCTGGCGCTCCAAAGAAGCCTAAACGTC
CCCCAGTCCCTTGCAAGAGGAAGTTGACCATGGAGCTCAAGTTCTTCGAGATCGTCAATCAAGAAGAGGTCGATAATTTCTTCCGATCCGCTTACGATCTTGAAGCTTCT
TCCACAGCGCCGCCCAAGAGGACCTGCTGCCGGTCAACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCATGGACCTTGAATTCCCCAAAAATCTCCCCAAAATCCGCCTCCCTTTACAGGTTCGATCCCCTCCCAAACCCTCCCTTTCCGACAACATACCTTCTTCCGCCTC
CGATCACGACTCCGACCTCGACCGCCGCGGCTGCCGGACACCAACCTCCGCCGAGCACAAGATTCCCAAGATCCTCAGCTGTCCTGGCGCTCCAAAGAAGCCTAAACGTC
CCCCAGTCCCTTGCAAGAGGAAGTTGACCATGGAGCTCAAGTTCTTCGAGATCGTCAATCAAGAAGAGGTCGATAATTTCTTCCGATCCGCTTACGATCTTGAAGCTTCT
TCCACAGCGCCGCCCAAGAGGACCTGCTGCCGGTCAACCTGA
Protein sequenceShow/hide protein sequence
MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASDHDSDLDRRGCRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEAS
STAPPKRTCCRST