; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10004162 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004162
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationChr08:14323805..14324422
RNA-Seq ExpressionHG10004162
SyntenyHG10004162
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578789.1 hypothetical protein SDJN03_23237, partial [Cucurbita argyrosperma subsp. sororia]2.2e-3682.61Show/hide
Query:  MACNRAIGATLMALLLVDLAFAARSPRRGFGEGGGWGGGGGSGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAFGRGGGGGGGGGSGGGGGGGTGSG
        MAC+RA+G  L+AL LVD AFAARSPR  FGE    GGGGG GGGGGGGLFPGSGY SGFGSGGGEGYGEG+GDG FGRGGGGGG    GGGGGGGTGS 
Subjt:  MACNRAIGATLMALLLVDLAFAARSPRRGFGEGGGWGGGGGSGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAFGRGGGGGGGGGSGGGGGGGTGSG

Query:  SGFGSGFGSGSGSGFGKGGGGGGGGGR--GGGGGGGSGGGNGSGYGSGYGSGGGYGSGSGRGGGGGEGGGGGGGGGGGGSTGSGSGFGSGYGSGYGSGRG
           GSGFGSGSGSGFG+G GGGGGGGR  GGGGGGGSGGGNGSGYGSGYGSG G+GSG+GRGGGG  GGGGGGGGGGGGSTGSGSG+GSGYGSGYGSGRG
Subjt:  SGFGSGFGSGSGSGFGKGGGGGGGGGR--GGGGGGGSGGGNGSGYGSGYGSGGGYGSGSGRGGGGGEGGGGGGGGGGGGSTGSGSGFGSGYGSGYGSGRG

Query:  GWEEISP
        GW+EISP
Subjt:  GWEEISP

XP_008456803.1 PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo]1.7e-4490.59Show/hide
Query:  MACNRAIGATLMALLLVDLAFAARSPRRGFGEGGGWGGGGGSGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAFGRGGGGGGGGGSGGGGGGGTGSG
        MA NRAIG TL+AL LVDLAFAAR+PR+GFGEGGGWGGGGGSGGGGGGGLFPGSGY  GFGSGGGEGYGEGEGDGAFGR  GGGGGGGSGGGGGGGTG  
Subjt:  MACNRAIGATLMALLLVDLAFAARSPRRGFGEGGGWGGGGGSGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAFGRGGGGGGGGGSGGGGGGGTGSG

Query:  SGFGSGFGSGSGSGFGKGGGGGGGGGRGGGGGGGSGGGNGSGYGSGYGSGGGYGSGSGRGGGGGEGGGGGGGGGGGGSTGSGSGFGSGYGSGYGSGRGGW
         GFGSGFG+GSGSGFGKGGGGGGGGGRGGGGGGGSGGGNGSGYGSGYGSGGGYGSG GRGGG   GGGGGGGGGGGGSTG+GSGFGSGYGSGYGSGRGGW
Subjt:  SGFGSGFGSGSGSGFGKGGGGGGGGGRGGGGGGGSGGGNGSGYGSGYGSGGGYGSGSGRGGGGGEGGGGGGGGGGGGSTGSGSGFGSGYGSGYGSGRGGW

Query:  EE
        EE
Subjt:  EE

XP_011650203.1 glycine-rich cell wall structural protein 2 [Cucumis sativus]3.9e-4188.12Show/hide
Query:  MACNRAIGATLMALLLVDLAFAARSPRRGFGEGGGWGGGGGSGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAFGRGGGGGGGGGSGGGGGGGTGSG
        MA NRAIGATL+AL LVDLAFAARSPR+GFGEGGGWGGGGGSGGGGGGGLFPGSGY  G+GSGGGEGYGEGEGDGAFGR  GGGGGGGSGGGGGGGTG  
Subjt:  MACNRAIGATLMALLLVDLAFAARSPRRGFGEGGGWGGGGGSGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAFGRGGGGGGGGGSGGGGGGGTGSG

Query:  SGFGSGFGSGSGSGFGKGGGGGGGGGRGGGGGGGSGGGNGSGYGSGYGSGGGYGSGSGRGGGGGEGGGGGGGGGGGGSTGSGSGFGSGYGSGYGSGRGGW
         GFGSGFGSGSGSGFGK   GGGGGGRGGGGGGGSGGGNGSGYGSGYGSGGGYGS      GGG GGGGGGGGGGGGS+G+GSGFGSGYGSGYGSGRGGW
Subjt:  SGFGSGFGSGSGSGFGKGGGGGGGGGRGGGGGGGSGGGNGSGYGSGYGSGGGYGSGSGRGGGGGEGGGGGGGGGGGGSTGSGSGFGSGYGSGYGSGRGGW

Query:  EE
        EE
Subjt:  EE

XP_022939145.1 glycine-rich cell wall structural protein 2-like [Cucurbita moschata]5.6e-3280.48Show/hide
Query:  MACNRAIGATLMALLLVDLAFAARSPRRGFGEGGGWGGGGGSGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAFGRGGGGGGGGGSGGGGGGGTGSG
        MAC+RA+G  L+AL LVD AFAARSPR  FGE     GGGG GGGGGGGLF GSGYGSGFGSGGGEGYGEG+GDG FGRGGGGG GG  GGGGGGGTGS 
Subjt:  MACNRAIGATLMALLLVDLAFAARSPRRGFGEGGGWGGGGGSGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAFGRGGGGGGGGGSGGGGGGGTGSG

Query:  SGFGSGFGSGSGSGFGKGGGGGGGGGR--GGGGGGGSGGGNGSGYGSGYGSGGGYGSGSGRGGGGGEGGGGGGGGG---GGGSTGSGSGFGSGYGSGYGS
            SGFGSGSGSGFG+G GGGGGGGR  GGGGGGGSGGGNGSGYGSGYGSG G+GSGSGRGGGGG G GGGGGGG   GGGSTGSGSG+GS YGSGYGS
Subjt:  SGFGSGFGSGSGSGFGKGGGGGGGGGR--GGGGGGGSGGGNGSGYGSGYGSGGGYGSGSGRGGGGGEGGGGGGGGG---GGGSTGSGSGFGSGYGSGYGS

Query:  GRGGWEEISP
        GR GW+EISP
Subjt:  GRGGWEEISP

XP_023551514.1 glycine-rich cell wall structural protein 2-like [Cucurbita pepo subsp. pepo]1.3e-3682.52Show/hide
Query:  MACNRAIGATLMALLLVDLAFAARSPRRGFGEGGGWGGGGGSGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAFGRGGGGGGGGGSGGGGGGGTGSG
        MAC+RA+G  L+AL LVD AFAARS R  FGEGGG GGGGGS GGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDG FGRGG G  GGG         G+G
Subjt:  MACNRAIGATLMALLLVDLAFAARSPRRGFGEGGGWGGGGGSGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAFGRGGGGGGGGGSGGGGGGGTGSG

Query:  SGFGSGFGSGSGSGFGKGGGGGGGGGRGGGGGGGSGGGNGSGYGSGYGSGGGYGSGSGR-GGGGGEGGGGGGGGGGGGSTGSGSGFGSGYGSGYGSGRGG
        +GFGSGFGSGSGSGFG+G GGGGGGGRGGGGGGGSGGGNGSGYGSGYGSG  +GSGSG+ GGGGG GGGGGGGGGGGGSTGSGSGFGSGYGSGYGSGRGG
Subjt:  SGFGSGFGSGSGSGFGKGGGGGGGGGRGGGGGGGSGGGNGSGYGSGYGSGGGYGSGSGR-GGGGGEGGGGGGGGGGGGSTGSGSGFGSGYGSGYGSGRGG

Query:  WEEISP
        W+EISP
Subjt:  WEEISP

TrEMBL top hitse value%identityAlignment
A0A0A0LML4 Uncharacterized protein1.9e-4188.12Show/hide
Query:  MACNRAIGATLMALLLVDLAFAARSPRRGFGEGGGWGGGGGSGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAFGRGGGGGGGGGSGGGGGGGTGSG
        MA NRAIGATL+AL LVDLAFAARSPR+GFGEGGGWGGGGGSGGGGGGGLFPGSGY  G+GSGGGEGYGEGEGDGAFGR  GGGGGGGSGGGGGGGTG  
Subjt:  MACNRAIGATLMALLLVDLAFAARSPRRGFGEGGGWGGGGGSGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAFGRGGGGGGGGGSGGGGGGGTGSG

Query:  SGFGSGFGSGSGSGFGKGGGGGGGGGRGGGGGGGSGGGNGSGYGSGYGSGGGYGSGSGRGGGGGEGGGGGGGGGGGGSTGSGSGFGSGYGSGYGSGRGGW
         GFGSGFGSGSGSGFGK   GGGGGGRGGGGGGGSGGGNGSGYGSGYGSGGGYGS      GGG GGGGGGGGGGGGS+G+GSGFGSGYGSGYGSGRGGW
Subjt:  SGFGSGFGSGSGSGFGKGGGGGGGGGRGGGGGGGSGGGNGSGYGSGYGSGGGYGSGSGRGGGGGEGGGGGGGGGGGGSTGSGSGFGSGYGSGYGSGRGGW

Query:  EE
        EE
Subjt:  EE

A0A1S3C3P6 glycine-rich cell wall structural protein 2-like8.1e-4590.59Show/hide
Query:  MACNRAIGATLMALLLVDLAFAARSPRRGFGEGGGWGGGGGSGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAFGRGGGGGGGGGSGGGGGGGTGSG
        MA NRAIG TL+AL LVDLAFAAR+PR+GFGEGGGWGGGGGSGGGGGGGLFPGSGY  GFGSGGGEGYGEGEGDGAFGR  GGGGGGGSGGGGGGGTG  
Subjt:  MACNRAIGATLMALLLVDLAFAARSPRRGFGEGGGWGGGGGSGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAFGRGGGGGGGGGSGGGGGGGTGSG

Query:  SGFGSGFGSGSGSGFGKGGGGGGGGGRGGGGGGGSGGGNGSGYGSGYGSGGGYGSGSGRGGGGGEGGGGGGGGGGGGSTGSGSGFGSGYGSGYGSGRGGW
         GFGSGFG+GSGSGFGKGGGGGGGGGRGGGGGGGSGGGNGSGYGSGYGSGGGYGSG GRGGG   GGGGGGGGGGGGSTG+GSGFGSGYGSGYGSGRGGW
Subjt:  SGFGSGFGSGSGSGFGKGGGGGGGGGRGGGGGGGSGGGNGSGYGSGYGSGGGYGSGSGRGGGGGEGGGGGGGGGGGGSTGSGSGFGSGYGSGYGSGRGGW

Query:  EE
        EE
Subjt:  EE

A0A5J5RR49 Uncharacterized protein2.7e-1671.56Show/hide
Query:  MACNRAIGATLMALLLVDLAFAARSPRR-GFGEGGGWGGGGGSGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAFGRGGGGGGGGGSGGGGGG---G
        M   R IGA  + LLLVDLAFAARS +  G G G G GGGGGSGGGG  GL  GSGYGSG+GSG G GY    G GA+G GGGGGGGGG GGGGGG   G
Subjt:  MACNRAIGATLMALLLVDLAFAARSPRR-GFGEGGGWGGGGGSGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAFGRGGGGGGGGGSGGGGGG---G

Query:  TGSGSGFGSGFGSGSGSGFGKGGGGGGGGGRGGGGGGGSGGGNGSGY--GSGYGSGGGYGSGSGRGGGGGEGGGGGGGGGGGGSTGSGSGFGSGYGSGYG
        +GSGSG+GSG GSG GSG G GGGGGGGGGRGGGGGGG G G GSGY  GSGYGSG GYGSG GRGGGGG GGGGGGGGGGGG  GSG G GSGYGSG G
Subjt:  TGSGSGFGSGFGSGSGSGFGKGGGGGGGGGRGGGGGGGSGGGNGSGY--GSGYGSGGGYGSGSGRGGGGGEGGGGGGGGGGGGSTGSGSGFGSGYGSGYG

Query:  SGRGGWEEISP
         G  G ++ SP
Subjt:  SGRGGWEEISP

A0A6J1FLU7 glycine-rich cell wall structural protein 2-like2.7e-3280.48Show/hide
Query:  MACNRAIGATLMALLLVDLAFAARSPRRGFGEGGGWGGGGGSGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAFGRGGGGGGGGGSGGGGGGGTGSG
        MAC+RA+G  L+AL LVD AFAARSPR  FGE     GGGG GGGGGGGLF GSGYGSGFGSGGGEGYGEG+GDG FGRGGGGG GG  GGGGGGGTGS 
Subjt:  MACNRAIGATLMALLLVDLAFAARSPRRGFGEGGGWGGGGGSGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAFGRGGGGGGGGGSGGGGGGGTGSG

Query:  SGFGSGFGSGSGSGFGKGGGGGGGGGR--GGGGGGGSGGGNGSGYGSGYGSGGGYGSGSGRGGGGGEGGGGGGGGG---GGGSTGSGSGFGSGYGSGYGS
            SGFGSGSGSGFG+G GGGGGGGR  GGGGGGGSGGGNGSGYGSGYGSG G+GSGSGRGGGGG G GGGGGGG   GGGSTGSGSG+GS YGSGYGS
Subjt:  SGFGSGFGSGSGSGFGKGGGGGGGGGR--GGGGGGGSGGGNGSGYGSGYGSGGGYGSGSGRGGGGGEGGGGGGGGG---GGGSTGSGSGFGSGYGSGYGS

Query:  GRGGWEEISP
        GR GW+EISP
Subjt:  GRGGWEEISP

B9T304 Glycine-rich cell wall structural protein 1, putative2.7e-1672.3Show/hide
Query:  RAIGATLMALLLVDLAFAARSPRRGFGEGGGWGGGGGSGGGGGGG--LFPGSGYGSGFGSGGGEGYGEGEGDGAFGRGGGGGGGGGSGGGGGGGTGSGSG
        R +GA  + LLL+DL FAARS +  FG  GG GGGGG GGGGGGG  L  GSGYGSG+GSGGGEGYG   G G  G GGGGGGGGGSGGGGGGG+ SGSG
Subjt:  RAIGATLMALLLVDLAFAARSPRRGFGEGGGWGGGGGSGGGGGGG--LFPGSGYGSGFGSGGGEGYGEGEGDGAFGRGGGGGGGGGSGGGGGGGTGSGSG

Query:  FGSGFGSGSGSGF------GKGGGGGGGGGRGGGGGGGS--GGGNGSGYGSGY--GSGGGYGSGSGR-GGGGGEGGGGGGGGGGGGSTGSGSGFGSGY--
         GSG+GSGSGSG+      GKGGGGGGGGG+GGGGGGG   G GNGSGYGSGY  GSG GYGSG G+ GGGGG GGGGGGGGGGGG +GSGSG+GSGY  
Subjt:  FGSGFGSGSGSGF------GKGGGGGGGGGRGGGGGGGS--GGGNGSGYGSGY--GSGGGYGSGSGR-GGGGGEGGGGGGGGGGGGSTGSGSGFGSGY--

Query:  GSGYGSGRGGWEE
        GSGYGSG GG E+
Subjt:  GSGYGSGRGGWEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTGCAACAGAGCGATTGGGGCTACATTGATGGCTTTGCTCCTCGTGGACCTCGCCTTCGCTGCCCGATCGCCGAGGAGAGGGTTCGGTGAAGGAGGAGGTTGGGG
AGGCGGTGGCGGAAGCGGCGGAGGAGGAGGAGGAGGACTGTTTCCAGGTTCGGGTTACGGCTCCGGTTTTGGTTCGGGCGGAGGAGAAGGATACGGTGAGGGAGAAGGCG
ACGGAGCGTTCGGCAGAGGCGGCGGAGGAGGAGGAGGCGGAGGAAGCGGTGGTGGAGGTGGGGGCGGAACAGGGTCCGGATCTGGATTCGGGTCGGGATTCGGATCCGGA
AGCGGTTCAGGGTTTGGAAAAGGCGGCGGAGGTGGAGGCGGCGGGGGCAGAGGAGGAGGAGGAGGCGGAGGCTCCGGAGGCGGAAATGGATCAGGATACGGCTCGGGATA
CGGCAGCGGAGGCGGATATGGAAGTGGGAGCGGCAGAGGAGGCGGTGGAGGCGAAGGAGGAGGAGGAGGCGGCGGTGGCGGAGGCGGAGGTTCCACCGGGAGTGGCTCTG
GATTTGGTTCGGGATACGGGTCGGGCTACGGATCCGGACGCGGAGGATGGGAAGAAATCTCGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTGCAACAGAGCGATTGGGGCTACATTGATGGCTTTGCTCCTCGTGGACCTCGCCTTCGCTGCCCGATCGCCGAGGAGAGGGTTCGGTGAAGGAGGAGGTTGGGG
AGGCGGTGGCGGAAGCGGCGGAGGAGGAGGAGGAGGACTGTTTCCAGGTTCGGGTTACGGCTCCGGTTTTGGTTCGGGCGGAGGAGAAGGATACGGTGAGGGAGAAGGCG
ACGGAGCGTTCGGCAGAGGCGGCGGAGGAGGAGGAGGCGGAGGAAGCGGTGGTGGAGGTGGGGGCGGAACAGGGTCCGGATCTGGATTCGGGTCGGGATTCGGATCCGGA
AGCGGTTCAGGGTTTGGAAAAGGCGGCGGAGGTGGAGGCGGCGGGGGCAGAGGAGGAGGAGGAGGCGGAGGCTCCGGAGGCGGAAATGGATCAGGATACGGCTCGGGATA
CGGCAGCGGAGGCGGATATGGAAGTGGGAGCGGCAGAGGAGGCGGTGGAGGCGAAGGAGGAGGAGGAGGCGGCGGTGGCGGAGGCGGAGGTTCCACCGGGAGTGGCTCTG
GATTTGGTTCGGGATACGGGTCGGGCTACGGATCCGGACGCGGAGGATGGGAAGAAATCTCGCCATGA
Protein sequenceShow/hide protein sequence
MACNRAIGATLMALLLVDLAFAARSPRRGFGEGGGWGGGGGSGGGGGGGLFPGSGYGSGFGSGGGEGYGEGEGDGAFGRGGGGGGGGGSGGGGGGGTGSGSGFGSGFGSG
SGSGFGKGGGGGGGGGRGGGGGGGSGGGNGSGYGSGYGSGGGYGSGSGRGGGGGEGGGGGGGGGGGGSTGSGSGFGSGYGSGYGSGRGGWEEISP