; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10004190 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004190
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionamino acid transporter AVT1C-like
Genome locationChr08:14604786..14605485
RNA-Seq ExpressionHG10004190
SyntenyHG10004190
Gene Ontology termsGO:0006865 - amino acid transport (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0015293 - symporter activity (molecular function)
InterPro domainsIPR013057 - Amino acid transporter, transmembrane domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016299.1 Amino acid transporter AVT1C, partial [Cucurbita argyrosperma subsp. argyrosperma]8.3e-3477.78Show/hide
Query:  PTYALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVR---------------------TLCCIVIAVGVIA
        PTYALTISPVAMSLEEFIPPNHPK+ IYSILIRT LVISTLLVGLSIPFFGLMMSLIGSLLTMLV                      TLCCIVIAVGVIA
Subjt:  PTYALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVR---------------------TLCCIVIAVGVIA

Query:  SAFGSYSALKKIIEKLS
        SAFGSYS+LKKIIEKLS
Subjt:  SAFGSYSALKKIIEKLS

XP_022938397.1 amino acid transporter AVT1C-like [Cucurbita moschata]1.6e-3277.39Show/hide
Query:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVR---------------------TLCCIVIAVGVIASA
        YALTISPVAMSLEEFIPPNHPK+ IYSILIRT LVISTLLVGLSIPFFGLMMSLIGSLLTMLV                      TLCCIVIAVGVIASA
Subjt:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVR---------------------TLCCIVIAVGVIASA

Query:  FGSYSALKKIIEKLS
        FGSYS+LKKIIEKLS
Subjt:  FGSYSALKKIIEKLS

XP_022993096.1 amino acid transporter AVT1C-like [Cucurbita maxima]1.6e-3277.39Show/hide
Query:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVR---------------------TLCCIVIAVGVIASA
        YALTISPVAMSLEEFIPPNHPK+ IYSILIRT LVISTLLVGLSIPFFGLMMSLIGSLLTMLV                      TLCCIVIAVGVIASA
Subjt:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVR---------------------TLCCIVIAVGVIASA

Query:  FGSYSALKKIIEKLS
        FGSYS+LKKIIEKLS
Subjt:  FGSYSALKKIIEKLS

XP_023550515.1 amino acid transporter AVT1C-like [Cucurbita pepo subsp. pepo]1.6e-3277.39Show/hide
Query:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVR---------------------TLCCIVIAVGVIASA
        YALTISPVAMSLEEFIPPNHPK+ IYSILIRT LVISTLLVGLSIPFFGLMMSLIGSLLTMLV                      TLCCIVIAVGVIASA
Subjt:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVR---------------------TLCCIVIAVGVIASA

Query:  FGSYSALKKIIEKLS
        FGSYS+LKKIIEKLS
Subjt:  FGSYSALKKIIEKLS

XP_038886658.1 amino acid transporter AVT1C-like [Benincasa hispida]7.5e-3579.31Show/hide
Query:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLV---------------------RTLCCIVIAVGVIASA
        YALTISPVAMSLEEFIPPNHPKS +YSILIRTGLVISTLLVGLS+PFFGLMMSLIGSLLTMLV                     RTLCCIVIAVGVIASA
Subjt:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLV---------------------RTLCCIVIAVGVIASA

Query:  FGSYSALKKIIEKLSG
        FGSYSALKKIIEKLSG
Subjt:  FGSYSALKKIIEKLSG

TrEMBL top hitse value%identityAlignment
A0A0A0KG55 Aa_trans domain-containing protein5.3e-3474.58Show/hide
Query:  MPTYALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLV---------------------RTLCCIVIAVGVI
        +PTYALTISPVAMSLEEFIPPNHPKS IYSILIRTGLV STLLVGLS+PFFGLMMSLIGSLLTMLV                     R LCCIVIAVGV+
Subjt:  MPTYALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLV---------------------RTLCCIVIAVGVI

Query:  ASAFGSYSALKKIIEKLS
        ASAFGS+SALKKI+E+LS
Subjt:  ASAFGSYSALKKIIEKLS

A0A1S3C3I3 vacuolar amino acid transporter 1-like1.7e-3274.14Show/hide
Query:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLV---------------------RTLCCIVIAVGVIASA
        YALTISPVAMSLEEFIPPNHPKS  YSILIRTGLVISTLLVGLS+PFFGLMMSLIGSLLTMLV                     R LCCIVIAVGV+ASA
Subjt:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLV---------------------RTLCCIVIAVGVIASA

Query:  FGSYSALKKIIEKLSG
         GS+SA+KKIIE+LSG
Subjt:  FGSYSALKKIIEKLSG

A0A6J1FIS2 amino acid transporter AVT1C-like7.6e-3377.39Show/hide
Query:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVR---------------------TLCCIVIAVGVIASA
        YALTISPVAMSLEEFIPPNHPK+ IYSILIRT LVISTLLVGLSIPFFGLMMSLIGSLLTMLV                      TLCCIVIAVGVIASA
Subjt:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVR---------------------TLCCIVIAVGVIASA

Query:  FGSYSALKKIIEKLS
        FGSYS+LKKIIEKLS
Subjt:  FGSYSALKKIIEKLS

A0A6J1H171 amino acid transporter AVT1C-like isoform X17.1e-3172.41Show/hide
Query:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLV---------------------RTLCCIVIAVGVIASA
        YALTISPVAMSLEEFIPPNHPKS IYSILIRT LVISTLLVGLSIPFFGL+MSLIGSLLTMLV                     R LC IVIA+G +ASA
Subjt:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLV---------------------RTLCCIVIAVGVIASA

Query:  FGSYSALKKIIEKLSG
        FGSYS+L+KIIEKL+G
Subjt:  FGSYSALKKIIEKLSG

A0A6J1K167 amino acid transporter AVT1C-like7.6e-3377.39Show/hide
Query:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVR---------------------TLCCIVIAVGVIASA
        YALTISPVAMSLEEFIPPNHPK+ IYSILIRT LVISTLLVGLSIPFFGLMMSLIGSLLTMLV                      TLCCIVIAVGVIASA
Subjt:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVR---------------------TLCCIVIAVGVIASA

Query:  FGSYSALKKIIEKLS
        FGSYS+LKKIIEKLS
Subjt:  FGSYSALKKIIEKLS

SwissProt top hitse value%identityAlignment
F4IUW3 Amino acid transporter AVT1C1.2e-2259.13Show/hide
Query:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLV---------------------RTLCCIVIAVGVIASA
        YALTISPVAMSLEE IP  H +S  Y+I IRT LV STLLVGL+IPFFGL+MSLIGSLLTMLV                       LC ++I VG I+S 
Subjt:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLV---------------------RTLCCIVIAVGVIASA

Query:  FGSYSALKKIIEKLS
         GSYSAL KI+EKL+
Subjt:  FGSYSALKKIIEKLS

F4JE35 Amino acid transporter AVT1B9.0e-2354.78Show/hide
Query:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVR---------------------TLCCIVIAVGVIASA
        YALT+SPVAMSLEE IP N+ KS+ Y+I IR+ L ISTLLVGL+IPFFGL+MSLIGS LTML+                      T+C +++ VG + S 
Subjt:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVR---------------------TLCCIVIAVGVIASA

Query:  FGSYSALKKIIEKLS
         G+YSAL KIIEKL+
Subjt:  FGSYSALKKIIEKLS

O80668 Amino acid transporter AVT1A1.5e-0939.64Show/hide
Query:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLV------------------RT---LCCIVIAVGVIASA
        YAL ++P+A S+EE +P    ++    +L+RT LV S++     IPFFGLMM+LIGSLL++LV                  RT   L  I++A+GV++  
Subjt:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLV------------------RT---LCCIVIAVGVIASA

Query:  FGSYSALKKII
         G+YS++ KII
Subjt:  FGSYSALKKII

Q8GYS4 Amino acid transporter AVT1D6.4e-1340.68Show/hide
Query:  MPTYALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVRT---------------------LCCIVIAVGVI
        M  YALTI+P+ MSLEE IP    +S+  SIL RT LV STL+V LS+PFF ++ +LIGS L MLV                       LC  +I  GV+
Subjt:  MPTYALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVRT---------------------LCCIVIAVGVI

Query:  ASAFGSYSALKKIIEKLS
        +   G+YSA+ ++  +++
Subjt:  ASAFGSYSALKKIIEKLS

Q8LPF4 Amino acid transporter AVT1E6.0e-1135.83Show/hide
Query:  MPTYALTISPVAMSLEEFIPPNHPK--SQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVRT---------------------LCCIVIAVG
        M  YALTI+PV +SLEE IP +  K  S+  S+L RT LV+STL+V L++PFF  + +LIGS + ML+                       +C +++ +G
Subjt:  MPTYALTISPVAMSLEEFIPPNHPK--SQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVRT---------------------LCCIVIAVG

Query:  VIASAFGSYSALKKIIEKLS
        +++   G+YSA+ ++I +++
Subjt:  VIASAFGSYSALKKIIEKLS

Arabidopsis top hitse value%identityAlignment
AT2G39130.1 Transmembrane amino acid transporter family protein8.3e-2459.13Show/hide
Query:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLV---------------------RTLCCIVIAVGVIASA
        YALTISPVAMSLEE IP  H +S  Y+I IRT LV STLLVGL+IPFFGL+MSLIGSLLTMLV                       LC ++I VG I+S 
Subjt:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLV---------------------RTLCCIVIAVGVIASA

Query:  FGSYSALKKIIEKLS
         GSYSAL KI+EKL+
Subjt:  FGSYSALKKIIEKLS

AT2G41190.1 Transmembrane amino acid transporter family protein1.1e-1039.64Show/hide
Query:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLV------------------RT---LCCIVIAVGVIASA
        YAL ++P+A S+EE +P    ++    +L+RT LV S++     IPFFGLMM+LIGSLL++LV                  RT   L  I++A+GV++  
Subjt:  YALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLV------------------RT---LCCIVIAVGVIASA

Query:  FGSYSALKKII
         G+YS++ KII
Subjt:  FGSYSALKKII

AT3G54830.1 Transmembrane amino acid transporter family protein7.8e-1472.73Show/hide
Query:  AMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLV
        AMSLEE IP N+ KS+ Y+I IR+ L ISTLLVGL+IPFFGL+MSLIGS LTML+
Subjt:  AMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLV

AT5G02170.1 Transmembrane amino acid transporter family protein4.3e-1235.83Show/hide
Query:  MPTYALTISPVAMSLEEFIPPNHPK--SQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVRT---------------------LCCIVIAVG
        M  YALTI+PV +SLEE IP +  K  S+  S+L RT LV+STL+V L++PFF  + +LIGS + ML+                       +C +++ +G
Subjt:  MPTYALTISPVAMSLEEFIPPNHPK--SQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVRT---------------------LCCIVIAVG

Query:  VIASAFGSYSALKKIIEKLS
        +++   G+YSA+ ++I +++
Subjt:  VIASAFGSYSALKKIIEKLS

AT5G02180.1 Transmembrane amino acid transporter family protein4.6e-1440.68Show/hide
Query:  MPTYALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVRT---------------------LCCIVIAVGVI
        M  YALTI+P+ MSLEE IP    +S+  SIL RT LV STL+V LS+PFF ++ +LIGS L MLV                       LC  +I  GV+
Subjt:  MPTYALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVRT---------------------LCCIVIAVGVI

Query:  ASAFGSYSALKKIIEKLS
        +   G+YSA+ ++  +++
Subjt:  ASAFGSYSALKKIIEKLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCACGTATGCATTAACAATATCTCCAGTTGCAATGAGTCTGGAGGAGTTCATACCACCAAACCATCCCAAGTCTCAAATTTATTCCATCCTAATTAGAACTGGTCT
TGTAATTTCTACCTTACTGGTCGGCCTTTCTATCCCCTTTTTTGGTCTTATGATGTCATTGATTGGATCATTGCTAACAATGCTTGTGAGAACCCTTTGTTGCATAGTTA
TAGCAGTAGGAGTTATTGCATCAGCATTTGGATCATATTCAGCTCTCAAGAAAATCATTGAGAAATTGAGCGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCACGTATGCATTAACAATATCTCCAGTTGCAATGAGTCTGGAGGAGTTCATACCACCAAACCATCCCAAGTCTCAAATTTATTCCATCCTAATTAGAACTGGTCT
TGTAATTTCTACCTTACTGGTCGGCCTTTCTATCCCCTTTTTTGGTCTTATGATGTCATTGATTGGATCATTGCTAACAATGCTTGTGAGAACCCTTTGTTGCATAGTTA
TAGCAGTAGGAGTTATTGCATCAGCATTTGGATCATATTCAGCTCTCAAGAAAATCATTGAGAAATTGAGCGGTTGA
Protein sequenceShow/hide protein sequence
MPTYALTISPVAMSLEEFIPPNHPKSQIYSILIRTGLVISTLLVGLSIPFFGLMMSLIGSLLTMLVRTLCCIVIAVGVIASAFGSYSALKKIIEKLSG