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HG10004196 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004196
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPhenylalanine ammonia-lyase
Genome locationChr08:14653816..14654226
RNA-Seq ExpressionHG10004196
SyntenyHG10004196
Gene Ontology termsGO:0006559 - L-phenylalanine catabolic process (biological process)
GO:0009800 - cinnamic acid biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0045548 - phenylalanine ammonia-lyase activity (molecular function)
InterPro domainsIPR001106 - Aromatic amino acid lyase
IPR008948 - L-Aspartase-like
IPR024083 - Fumarase/histidase, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5515527.1 hypothetical protein RHGRI_036534 [Rhododendron griersonianum]8.5e-3767.16Show/hide
Query:  MEFHPENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAAR-ASDVVVELSEEARPGVEASSRWVVKSMT
        ME   +NGN   PK  SLC      W  AAE L+ SHL+E K MV EF RP+VRLGGESLTIAQVAA+AAR A+ V VELSE AR GV+ASS WV++SM 
Subjt:  MEFHPENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAAR-ASDVVVELSEEARPGVEASSRWVVKSMT

Query:  NGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI
         GTDSYGVTTGFG+TSHRRT QG ALQKELIR++
Subjt:  NGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI

QUP61928.1 phenylalanine ammonia lyase [Rhododendron fortunei]1.5e-3667.16Show/hide
Query:  MEFHPENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAAR-ASDVVVELSEEARPGVEASSRWVVKSMT
        ME   +NGN   PK  SLC      W  AAE L+ SHL+E K MV EF RP+VRLGGESLTIAQVAA+AAR A+ V VELSE AR GV+ASS WV+ SM 
Subjt:  MEFHPENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAAR-ASDVVVELSEEARPGVEASSRWVVKSMT

Query:  NGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI
         GTDSYGVTTGFG+TSHRRT QG ALQKELIR++
Subjt:  NGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI

XP_004149916.1 phenylalanine ammonia-lyase G4 [Cucumis sativus]6.3e-5686.47Show/hide
Query:  MEFHPENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTN
        ME  PENG+HGW KEPSLC GVAAYWSGAA+GLE SHLEEFK MV EF R +VRLGGESLTIAQVAAIAAR+SDVVVELSEEAR  VEASSRWVV+SMTN
Subjt:  MEFHPENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTN

Query:  GTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI
        GTDSYGVTTGFGSTSHRRTDQGEALQKELIR++
Subjt:  GTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI

XP_008456500.1 PREDICTED: phenylalanine ammonia-lyase G4 [Cucumis melo]2.0e-5788.81Show/hide
Query:  MEFHPENGNHGWPK-EPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMT
        ME  PENGNHGWPK EPSLCGGVAAYWSGAA+GLE SHLEEFK MV EF RPIVRLGGESLTIAQVAAIAAR+SDVVVELSEE+R  VEASSRWVV+SMT
Subjt:  MEFHPENGNHGWPK-EPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMT

Query:  NGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI
        NGTDSYGVTTGFGSTSHRRTDQGEALQKELIR++
Subjt:  NGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI

XP_038883983.1 phenylalanine ammonia-lyase G4-like [Benincasa hispida]9.4e-5284.38Show/hide
Query:  ENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSY
        ENGN GW K PSLCGGVAAYW+ AA GLE SHLEEFK MV EF RPIV+LGGESLTIA VAAIAAR SDV+VELSEEARP VEASSRWV KS+TNGTDSY
Subjt:  ENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSY

Query:  GVTTGFGSTSHRRTDQGEALQKELIRWI
        GVTTGFGSTSHRRTDQGE LQKELIR++
Subjt:  GVTTGFGSTSHRRTDQGEALQKELIRWI

TrEMBL top hitse value%identityAlignment
A0A0A0KG52 Phenylalanine ammonia-lyase3.0e-5686.47Show/hide
Query:  MEFHPENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTN
        ME  PENG+HGW KEPSLC GVAAYWSGAA+GLE SHLEEFK MV EF R +VRLGGESLTIAQVAAIAAR+SDVVVELSEEAR  VEASSRWVV+SMTN
Subjt:  MEFHPENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTN

Query:  GTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI
        GTDSYGVTTGFGSTSHRRTDQGEALQKELIR++
Subjt:  GTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI

A0A1S3C3H3 Phenylalanine ammonia-lyase9.5e-5888.81Show/hide
Query:  MEFHPENGNHGWPK-EPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMT
        ME  PENGNHGWPK EPSLCGGVAAYWSGAA+GLE SHLEEFK MV EF RPIVRLGGESLTIAQVAAIAAR+SDVVVELSEE+R  VEASSRWVV+SMT
Subjt:  MEFHPENGNHGWPK-EPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMT

Query:  NGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI
        NGTDSYGVTTGFGSTSHRRTDQGEALQKELIR++
Subjt:  NGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI

A0A5D3BPF6 Phenylalanine ammonia-lyase9.5e-5888.81Show/hide
Query:  MEFHPENGNHGWPK-EPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMT
        ME  PENGNHGWPK EPSLCGGVAAYWSGAA+GLE SHLEEFK MV EF RPIVRLGGESLTIAQVAAIAAR+SDVVVELSEE+R  VEASSRWVV+SMT
Subjt:  MEFHPENGNHGWPK-EPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMT

Query:  NGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI
        NGTDSYGVTTGFGSTSHRRTDQGEALQKELIR++
Subjt:  NGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI

A0A6A4LKH3 Phenylalanine ammonia-lyase (Fragment)7.1e-3767.16Show/hide
Query:  MEFHPENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAAR-ASDVVVELSEEARPGVEASSRWVVKSMT
        ME   +NGN   PK  SLC      W  AAE L+ SHL+E K MV EF RP+VRLGGESLTIAQVAA+AAR A+ V VELSE AR GV+ASS WV+ SM 
Subjt:  MEFHPENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAAR-ASDVVVELSEEARPGVEASSRWVVKSMT

Query:  NGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI
         GTDSYGVTTGFG+TSHRRT QG ALQKELIR++
Subjt:  NGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI

A5BPT8 Phenylalanine ammonia-lyase1.3e-3564.96Show/hide
Query:  MEFHPENGN-HGWPKEPSLCGGVA--AYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASD-VVVELSEEARPGVEASSRWVVK
        MEF   NGN +G       C   A   YW+ AAE L+ SHLEE K MVA+F +P+VRLGGESL IAQVAA+AA  SD V VELSE AR GV+ASS WV++
Subjt:  MEFHPENGN-HGWPKEPSLCGGVA--AYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASD-VVVELSEEARPGVEASSRWVVK

Query:  SMTNGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI
        SM  GTDSYGVTTGFG+TSHRRT QG ALQKELIR++
Subjt:  SMTNGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI

SwissProt top hitse value%identityAlignment
O49835 Phenylalanine ammonia-lyase 14.1e-3460.15Show/hide
Query:  MEFHPENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTN
        ME   ENGN    K    C      W  A+E ++ SHL+E K+MVAEF +P+V+L G++LTI QVAAIAAR   V VEL+E AR GV+ASS WV+ SM  
Subjt:  MEFHPENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTN

Query:  GTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI
        GTDSYGVTTGFG+TSHRRT QG ALQKELIR++
Subjt:  GTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI

O64963 Phenylalanine ammonia-lyase 13.2e-3470.37Show/hide
Query:  WSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEAL
        W  AAE L+ SHL+E K MVAE+ +P+V+LGGESLTI+QVAAIA   S V VELSE AR GV+ASS WV+ SM+ GTDSYGVTTGFG+TSHRRT QG AL
Subjt:  WSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEAL

Query:  QKELIRWI
        QKELIR++
Subjt:  QKELIRWI

P14166 Phenylalanine ammonia-lyase2.4e-3470.37Show/hide
Query:  WSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEAL
        W  AAE L  SHL+E K MVAEF +P V+LGGE+LT+AQVA IA+R + V VELSEEAR GV+ASS WV+ SM  GTDSYGVTTGFG+TSHRRT QG AL
Subjt:  WSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEAL

Query:  QKELIRWI
        QKELIR++
Subjt:  QKELIRWI

P27991 Phenylalanine ammonia-lyase 12.9e-3569.44Show/hide
Query:  WSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEAL
        W  AAE ++ SHL+E K MVAE+ +P+VRLGGE+LTIAQVAA+A     V VELSE AR GV+ASS WV+ SM NGTDSYGVTTGFG+TSHRRT QG AL
Subjt:  WSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEAL

Query:  QKELIRWI
        QKELIR++
Subjt:  QKELIRWI

P45726 Phenylalanine ammonia-lyase9.8e-3666.1Show/hide
Query:  PSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTS
        P  C      W  AAE ++ SHLEE K MV EF +P+VRLGGE+LTI+QVAAIA R S+V VELSE AR GV+ASS WV++SM  GTDSYGVTTGFG+TS
Subjt:  PSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTS

Query:  HRRTDQGEALQKELIRWI
        HRRT +G ALQKELIR++
Subjt:  HRRTDQGEALQKELIRWI

Arabidopsis top hitse value%identityAlignment
AT2G37040.1 PHE ammonia lyase 12.5e-3454.48Show/hide
Query:  MEFHPENGNHGWPKEPSLCGG------------VAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVE
        ME +  + ++G   +  LCGG                W  AAE ++ SHL+E K MVAEF +P+V LGGE+LTI QVAAI+   + V VELSE AR GV 
Subjt:  MEFHPENGNHGWPKEPSLCGG------------VAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVE

Query:  ASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI
        ASS WV++SM  GTDSYGVTTGFG+TSHRRT  G ALQKELIR++
Subjt:  ASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI

AT3G10340.1 phenylalanine ammonia-lyase 46.8e-3262.96Show/hide
Query:  WSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEAL
        W+  AE L+ SHL+E K MV E+ +  V+LGGE+LTI QVAA+A       VEL+EEAR GV+ASS WV++SM  GTDSYGVTTGFG+TSHRRT QG AL
Subjt:  WSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEAL

Query:  QKELIRWI
        Q ELIR++
Subjt:  QKELIRWI

AT3G53260.1 phenylalanine ammonia-lyase 27.5e-3162.04Show/hide
Query:  WSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEAL
        W  AA+ ++ SHL+E K MV E+ RP+V LGGE+LTI QVAAI+     V VEL+E +R GV+ASS WV++SM  GTDSYGVTTGFG+TSHRRT  G AL
Subjt:  WSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEAL

Query:  QKELIRWI
        Q ELIR++
Subjt:  QKELIRWI

AT5G04230.1 phenyl alanine ammonia-lyase 34.8e-3062.96Show/hide
Query:  WSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEAL
        W+ AAE L+ SHLEE K MV ++ +  V+LGGE+LTI QVAA+A  +    VELSEEAR GV+ASS WV++SM   TD+YG+TTGFGS+S RRTDQG AL
Subjt:  WSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEAL

Query:  QKELIRWI
        QKELIR++
Subjt:  QKELIRWI

AT5G04230.2 phenyl alanine ammonia-lyase 34.8e-3062.96Show/hide
Query:  WSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEAL
        W+ AAE L+ SHLEE K MV ++ +  V+LGGE+LTI QVAA+A  +    VELSEEAR GV+ASS WV++SM   TD+YG+TTGFGS+S RRTDQG AL
Subjt:  WSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEAL

Query:  QKELIRWI
        QKELIR++
Subjt:  QKELIRWI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTCCATCCGGAAAATGGCAACCATGGATGGCCGAAGGAGCCCTCTTTGTGCGGTGGCGTGGCGGCGTATTGGAGCGGTGCGGCGGAGGGGCTCGAGCGGAGTCA
TTTGGAGGAGTTTAAACATATGGTGGCAGAATTTTGTCGCCCTATTGTACGACTTGGGGGCGAGAGCCTCACGATAGCGCAAGTTGCTGCCATTGCTGCTCGTGCCTCTG
ATGTTGTGGTGGAGCTGTCTGAGGAAGCTCGCCCTGGTGTAGAGGCGAGTAGTAGGTGGGTTGTTAAAAGCATGACTAATGGAACCGATAGTTATGGTGTTACGACTGGT
TTTGGTTCTACGTCGCATCGAAGGACTGACCAAGGAGAAGCCCTTCAGAAAGAGCTCATTAGGTGGATTACTCCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTCCATCCGGAAAATGGCAACCATGGATGGCCGAAGGAGCCCTCTTTGTGCGGTGGCGTGGCGGCGTATTGGAGCGGTGCGGCGGAGGGGCTCGAGCGGAGTCA
TTTGGAGGAGTTTAAACATATGGTGGCAGAATTTTGTCGCCCTATTGTACGACTTGGGGGCGAGAGCCTCACGATAGCGCAAGTTGCTGCCATTGCTGCTCGTGCCTCTG
ATGTTGTGGTGGAGCTGTCTGAGGAAGCTCGCCCTGGTGTAGAGGCGAGTAGTAGGTGGGTTGTTAAAAGCATGACTAATGGAACCGATAGTTATGGTGTTACGACTGGT
TTTGGTTCTACGTCGCATCGAAGGACTGACCAAGGAGAAGCCCTTCAGAAAGAGCTCATTAGGTGGATTACTCCTTCTTAA
Protein sequenceShow/hide protein sequence
MEFHPENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTG
FGSTSHRRTDQGEALQKELIRWITPS