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HG10004213 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004213
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr08:14814054..14815514
RNA-Seq ExpressionHG10004213
SyntenyHG10004213
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647299.1 hypothetical protein Csa_004166 [Cucumis sativus]1.3e-0541.96Show/hide
Query:  MPGSLYAICRA-----HRRSRWPPR-MAYEEPSISIYI-IALISKADEEREKENPNFKDF-----IQCLIYFTIKNITDPQTINSKGVEKASDRRSHAFK
        MPGSLYAICRA          W  R  AY      +YI + LISKA  +RE+E P  +       I   +YFT +      T N    E   DRRS  F 
Subjt:  MPGSLYAICRA-----HRRSRWPPR-MAYEEPSISIYI-IALISKADEEREKENPNFKDF-----IQCLIYFTIKNITDPQTINSKGVEKASDRRSHAFK

Query:  SDRVVMRAPEEG
        SDR VMR  EEG
Subjt:  SDRVVMRAPEEG
XP_022860934.1 uncharacterized protein LOC111381387 [Olea europaea var. sylvestris]1.9e-0478.79Show/hide
Query:  MPGSLYAICRAHRRSRWPPRMAYEEPSISIYII
        MPGSLYAICRAHRR+  PP MAYEEPSI  Y I
Subjt:  MPGSLYAICRAHRRSRWPPRMAYEEPSISIYII
TrEMBL top hitse value%identityAlignment
A0A0A0KG30 Uncharacterized protein5.3e-0540.68Show/hide
Query:  MPGSLYAICRA-----HRRSRWPPR-MAYEEPSISIYI-IALISKADEEREKENPNFKD-FIQCLIYFTI--------KNITDPQTINSKGVEKAS--DR
        MPGSLYAICRA          W  R  AY      +YI + LISKA  +RE+E P  +   +   IYFT+          +TD  T      +K    DR
Subjt:  MPGSLYAICRA-----HRRSRWPPR-MAYEEPSISIYI-IALISKADEEREKENPNFKD-FIQCLIYFTI--------KNITDPQTINSKGVEKAS--DR

Query:  RSHAFKSDRVVMRAPEEG
        RS  F SDR VMR  EEG
Subjt:  RSHAFKSDRVVMRAPEEG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGGCTCCCTGTATGCCATTTGTAGAGCTCACCGTCGTAGCCGATGGCCTCCGCGGATGGCGTATGAGGAGCCAAGCATATCCATATATATAATAGCCCTAATTTC
TAAGGCTGATGAAGAAAGGGAAAAAGAGAACCCTAACTTCAAAGATTTCATCCAATGCTTAATATATTTCACAATAAAGAATATCACAGATCCACAGACAATAAATAGCA
AAGGAGTGGAAAAGGCAAGCGACCGAAGATCTCATGCGTTTAAATCTGATCGTGTGGTGATGCGTGCTCCAGAAGAAGGAGTAGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTGGCTCCCTGTATGCCATTTGTAGAGCTCACCGTCGTAGCCGATGGCCTCCGCGGATGGCGTATGAGGAGCCAAGCATATCCATATATATAATAGCCCTAATTTC
TAAGGCTGATGAAGAAAGGGAAAAAGAGAACCCTAACTTCAAAGATTTCATCCAATGCTTAATATATTTCACAATAAAGAATATCACAGATCCACAGACAATAAATAGCA
AAGGAGTGGAAAAGGCAAGCGACCGAAGATCTCATGCGTTTAAATCTGATCGTGTGGTGATGCGTGCTCCAGAAGAAGGAGTAGGATAG
Protein sequenceShow/hide protein sequence
MPGSLYAICRAHRRSRWPPRMAYEEPSISIYIIALISKADEEREKENPNFKDFIQCLIYFTIKNITDPQTINSKGVEKASDRRSHAFKSDRVVMRAPEEGVG