; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10004227 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004227
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr08:14952985..14953446
RNA-Seq ExpressionHG10004227
SyntenyHG10004227
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064635.1 hypothetical protein E6C27_scaffold255G003590 [Cucumis melo var. makuwa]3.3e-2146.41Show/hide
Query:  MNMMQTKRRFVASHFSNSKILSSKVSTIL-KTSTTIQKKKSNSKNSKLTQFKTP-----------PPKT-----VLLPTKAAQVEMLRAKFGDTILKTQQ
        M MMQ KRR+V   F   K+LS+KV+T + +  T I + K ++ N +L +F++P           P KT     VL P +AA+VEML+ KFG TILK QQ
Subjt:  MNMMQTKRRFVASHFSNSKILSSKVSTIL-KTSTTIQKKKSNSKNSKLTQFKTP-----------PPKT-----VLLPTKAAQVEMLRAKFGDTILKTQQ

Query:  TLFH-NSKIPQDVFVVAPNICSIQQQRQVARQALDNMKSIFDFNENLDGMREF
         L + +S I + V V AP +CSIQ+QR+ +R++LD +K +FDFNENLD MR+F
Subjt:  TLFH-NSKIPQDVFVVAPNICSIQQQRQVARQALDNMKSIFDFNENLDGMREF

KAE8647905.1 hypothetical protein Csa_000421, partial [Cucumis sativus]9.0e-1945.16Show/hide
Query:  MNMMQTKRRFVASHFSNSKILSSKVSTILKTSTTIQKKKSNSKNSKLTQFKTPPPK---------------TVLLPTKAAQVEMLRAKFGDTILKTQQTL
        M MMQTKRR V  H    K+LS+KV+T +K     Q+K+S S + +L  FK P PK                VL P +AA+VE+L+AKFG TILK QQ L
Subjt:  MNMMQTKRRFVASHFSNSKILSSKVSTILKTSTTIQKKKSNSKNSKLTQFKTPPPK---------------TVLLPTKAAQVEMLRAKFGDTILKTQQTL

Query:  FH----NSKIPQDVFVVAPNICSI-QQQRQVARQALDNMKSIFDFNENLDGMREF
         +    ++K    V    P  CSI Q+Q++ +R+ALD +  +FDFNENLD MREF
Subjt:  FH----NSKIPQDVFVVAPNICSI-QQQRQVARQALDNMKSIFDFNENLDGMREF

KAG6589050.1 hypothetical protein SDJN03_17615, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1237.85Show/hide
Query:  MNMMQTKRRFVASHFSNSKILSSKVSTILKTSTTIQKKKSNSKNSKLTQFKTPPPKT---VLLPTKAAQVEMLRAKFGDTILKTQQTLFHNSKIPQDVFV
        M MMQTKRR+     SN  ++SS V+T L+ S   +   SN  +SK + FKTPP +T   V  PTK A+VEML+ KF +TI K QQ L    KI + V V
Subjt:  MNMMQTKRRFVASHFSNSKILSSKVSTILKTSTTIQKKKSNSKNSKLTQFKTPPPKT---VLLPTKAAQVEMLRAKFGDTILKTQQTLFHNSKIPQDVFV

Query:  ---------VAPNIC------------------------------SIQQQRQVARQALDNMKSIFDFNENLDGMREF
                  APN+                               S+++QR+ +R+ALD +K   +FNENLD M+EF
Subjt:  ---------VAPNIC------------------------------SIQQQRQVARQALDNMKSIFDFNENLDGMREF

KGN61401.2 hypothetical protein Csa_006690, partial [Cucumis sativus]2.4e-1945.16Show/hide
Query:  MNMMQTKRRFVASHFSNSKILSSKVSTILKTSTTIQKKKSNSKNSKLTQFKTPPPK---------------TVLLPTKAAQVEMLRAKFGDTILKTQQTL
        M MMQTKRR+V  H    K+LS+KV+T +K     Q+K+SNS + +L  FK P PK                VL P +AA+VE+L+AKFG TILK QQ L
Subjt:  MNMMQTKRRFVASHFSNSKILSSKVSTILKTSTTIQKKKSNSKNSKLTQFKTPPPK---------------TVLLPTKAAQVEMLRAKFGDTILKTQQTL

Query:  FH----NSKIPQDVFVVAPNICSI-QQQRQVARQALDNMKSIFDFNENLDGMREF
         +    ++K    V    P  CSI Q+Q++ +R+ALD +  +F+FNENLD MREF
Subjt:  FH----NSKIPQDVFVVAPNICSI-QQQRQVARQALDNMKSIFDFNENLDGMREF

TYK19957.1 hypothetical protein E5676_scaffold134G00700 [Cucumis melo var. makuwa]3.3e-2146.41Show/hide
Query:  MNMMQTKRRFVASHFSNSKILSSKVSTIL-KTSTTIQKKKSNSKNSKLTQFKTP-----------PPKT-----VLLPTKAAQVEMLRAKFGDTILKTQQ
        M MMQ KRR+V   F   K+LS+KV+T + +  T I + K ++ N +L +F++P           P KT     VL P +AA+VEML+ KFG TILK QQ
Subjt:  MNMMQTKRRFVASHFSNSKILSSKVSTIL-KTSTTIQKKKSNSKNSKLTQFKTP-----------PPKT-----VLLPTKAAQVEMLRAKFGDTILKTQQ

Query:  TLFH-NSKIPQDVFVVAPNICSIQQQRQVARQALDNMKSIFDFNENLDGMREF
         L + +S I + V V AP +CSIQ+QR+ +R++LD +K +FDFNENLD MR+F
Subjt:  TLFH-NSKIPQDVFVVAPNICSIQQQRQVARQALDNMKSIFDFNENLDGMREF

TrEMBL top hitse value%identityAlignment
A0A0A0KMZ1 Uncharacterized protein1.8e-1741.92Show/hide
Query:  MNMMQTKRRFVASHFSNSKILSSKVSTILKTSTTIQKKKSNSKNSKLTQFKTPPPK---------------TVLLPTKAAQVEMLRAKFGDTILKTQQTL
        M MMQTKRR++  H    K+LS+KV+  +K     Q+K+SN  + +LT FK   PK                VL P +AA+VE+L+AKFG TI K QQ L
Subjt:  MNMMQTKRRFVASHFSNSKILSSKVSTILKTSTTIQKKKSNSKNSKLTQFKTPPPK---------------TVLLPTKAAQVEMLRAKFGDTILKTQQTL

Query:  ----FHNSKIPQDVFVVAPNICSI-QQQRQVARQALDNM-KSIFDFNENLDGMREFVTKYARAYLVI
              ++K    V    P  CSI Q+Q++ +R+ALD M   +FDFNENLD M+EF   ++RA+ V+
Subjt:  ----FHNSKIPQDVFVVAPNICSI-QQQRQVARQALDNM-KSIFDFNENLDGMREFVTKYARAYLVI

A0A0A0KRB6 Uncharacterized protein1.1e-1446.72Show/hide
Query:  TSTTIQKKKSNSKNSKLTQFKTPPPK-------------TVLLPTKAAQVEMLRAKFGDTILKTQQTLFHNSKIPQD----VFVVAPNICSIQQQRQVAR
        T   I + K ++ +  L  FK P PK              VL P +AA+VE+L+AKFG TILK QQ L HNS    +    +    PNICSIQ+QRQ  R
Subjt:  TSTTIQKKKSNSKNSKLTQFKTPPPK-------------TVLLPTKAAQVEMLRAKFGDTILKTQQTLFHNSKIPQD----VFVVAPNICSIQQQRQVAR

Query:  QALDNMKSIFDFNENLDGMREF
        +ALD +   FDFNENLD MREF
Subjt:  QALDNMKSIFDFNENLDGMREF

A0A5A7VFH7 Uncharacterized protein1.6e-2146.41Show/hide
Query:  MNMMQTKRRFVASHFSNSKILSSKVSTIL-KTSTTIQKKKSNSKNSKLTQFKTP-----------PPKT-----VLLPTKAAQVEMLRAKFGDTILKTQQ
        M MMQ KRR+V   F   K+LS+KV+T + +  T I + K ++ N +L +F++P           P KT     VL P +AA+VEML+ KFG TILK QQ
Subjt:  MNMMQTKRRFVASHFSNSKILSSKVSTIL-KTSTTIQKKKSNSKNSKLTQFKTP-----------PPKT-----VLLPTKAAQVEMLRAKFGDTILKTQQ

Query:  TLFH-NSKIPQDVFVVAPNICSIQQQRQVARQALDNMKSIFDFNENLDGMREF
         L + +S I + V V AP +CSIQ+QR+ +R++LD +K +FDFNENLD MR+F
Subjt:  TLFH-NSKIPQDVFVVAPNICSIQQQRQVARQALDNMKSIFDFNENLDGMREF

A0A5D3D8Q3 Uncharacterized protein1.6e-2146.41Show/hide
Query:  MNMMQTKRRFVASHFSNSKILSSKVSTIL-KTSTTIQKKKSNSKNSKLTQFKTP-----------PPKT-----VLLPTKAAQVEMLRAKFGDTILKTQQ
        M MMQ KRR+V   F   K+LS+KV+T + +  T I + K ++ N +L +F++P           P KT     VL P +AA+VEML+ KFG TILK QQ
Subjt:  MNMMQTKRRFVASHFSNSKILSSKVSTIL-KTSTTIQKKKSNSKNSKLTQFKTP-----------PPKT-----VLLPTKAAQVEMLRAKFGDTILKTQQ

Query:  TLFH-NSKIPQDVFVVAPNICSIQQQRQVARQALDNMKSIFDFNENLDGMREF
         L + +S I + V V AP +CSIQ+QR+ +R++LD +K +FDFNENLD MR+F
Subjt:  TLFH-NSKIPQDVFVVAPNICSIQQQRQVARQALDNMKSIFDFNENLDGMREF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATGATGCAAACAAAACGAAGATTCGTAGCTTCTCATTTTTCAAACTCCAAGATTCTTTCCAGCAAAGTTTCAACCATTTTGAAAACATCAACCACTATCCAAAA
AAAGAAATCAAATAGTAAAAATTCTAAACTAACCCAATTCAAAACTCCACCACCAAAGACTGTATTGTTGCCCACAAAAGCTGCTCAAGTAGAGATGCTAAGAGCTAAAT
TTGGTGATACCATTTTGAAAACTCAACAAACACTTTTTCACAATTCTAAAATTCCTCAAGACGTTTTTGTTGTTGCTCCAAATATATGCTCTATACAACAACAAAGACAA
GTTGCAAGACAAGCTCTTGACAACATGAAGTCCATCTTTGATTTTAATGAGAATCTTGATGGCATGAGGGAATTTGTTACCAAATACGCTCGAGCATATCTGGTTATAAC
CTACTTTGTCTTTTATCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATATGATGCAAACAAAACGAAGATTCGTAGCTTCTCATTTTTCAAACTCCAAGATTCTTTCCAGCAAAGTTTCAACCATTTTGAAAACATCAACCACTATCCAAAA
AAAGAAATCAAATAGTAAAAATTCTAAACTAACCCAATTCAAAACTCCACCACCAAAGACTGTATTGTTGCCCACAAAAGCTGCTCAAGTAGAGATGCTAAGAGCTAAAT
TTGGTGATACCATTTTGAAAACTCAACAAACACTTTTTCACAATTCTAAAATTCCTCAAGACGTTTTTGTTGTTGCTCCAAATATATGCTCTATACAACAACAAAGACAA
GTTGCAAGACAAGCTCTTGACAACATGAAGTCCATCTTTGATTTTAATGAGAATCTTGATGGCATGAGGGAATTTGTTACCAAATACGCTCGAGCATATCTGGTTATAAC
CTACTTTGTCTTTTATCATTAA
Protein sequenceShow/hide protein sequence
MNMMQTKRRFVASHFSNSKILSSKVSTILKTSTTIQKKKSNSKNSKLTQFKTPPPKTVLLPTKAAQVEMLRAKFGDTILKTQQTLFHNSKIPQDVFVVAPNICSIQQQRQ
VARQALDNMKSIFDFNENLDGMREFVTKYARAYLVITYFVFYH