; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10004237 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004237
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptioncentromere protein V-like
Genome locationChr08:15061520..15061939
RNA-Seq ExpressionHG10004237
SyntenyHG10004237
Gene Ontology termsGO:0016846 - carbon-sulfur lyase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006913 - CENP-V/GFA domain
IPR011057 - Mss4-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464790.1 PREDICTED: centromere protein V isoform X2 [Cucumis melo]1.1e-7494.85Show/hide
Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK
        MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNF+STYTFGSHTAKHTFCK CGITSFY PRSNPDGVA+TFK
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK

Query:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSKFD
        CVDPGTLTHVE+RQFDGSNWEASYDHTGIASFSK +
Subjt:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSKFD

XP_008464792.1 PREDICTED: centromere protein V isoform X4 [Cucumis melo]6.2e-7593.53Show/hide
Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK
        MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNF+STYTFGSHTAKHTFCK CGITSFY PRSNPDGVA+TFK
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK

Query:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSKFDNTS
        CVDPGTLTHVE+RQFDGSNWEASYDHTGIASFSK +  S
Subjt:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSKFDNTS

XP_016903270.1 PREDICTED: centromere protein V isoform X1 [Cucumis melo]8.1e-7594.96Show/hide
Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK
        MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNF+STYTFGSHTAKHTFCK CGITSFY PRSNPDGVA+TFK
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK

Query:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSKFDNTS
        CVDPGTLTHVE+RQFDGSNWEASYDHTGIASFSK  NTS
Subjt:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSKFDNTS

XP_016903271.1 PREDICTED: centromere protein V isoform X6 [Cucumis melo]8.1e-7594.96Show/hide
Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK
        MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNF+STYTFGSHTAKHTFCK CGITSFY PRSNPDGVA+TFK
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK

Query:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSKFDNTS
        CVDPGTLTHVE+RQFDGSNWEASYDHTGIASFSK  NTS
Subjt:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSKFDNTS

XP_038884393.1 centromere protein V [Benincasa hispida]1.0e-7797.1Show/hide
Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK
        MASELVVHNGGCHCKKVRW+VEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVA+TFK
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK

Query:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSKFDNT
        CVDPGTLTHVEIR+FDGSNWEASYDHTGIASFSKF+NT
Subjt:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSKFDNT

TrEMBL top hitse value%identityAlignment
A0A1S3CMD8 centromere protein V isoform X25.1e-7594.85Show/hide
Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK
        MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNF+STYTFGSHTAKHTFCK CGITSFY PRSNPDGVA+TFK
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK

Query:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSKFD
        CVDPGTLTHVE+RQFDGSNWEASYDHTGIASFSK +
Subjt:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSKFD

A0A1S3CNW6 centromere protein V isoform X43.0e-7593.53Show/hide
Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK
        MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNF+STYTFGSHTAKHTFCK CGITSFY PRSNPDGVA+TFK
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK

Query:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSKFDNTS
        CVDPGTLTHVE+RQFDGSNWEASYDHTGIASFSK +  S
Subjt:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSKFDNTS

A0A1S4E4W3 centromere protein V isoform X63.9e-7594.96Show/hide
Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK
        MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNF+STYTFGSHTAKHTFCK CGITSFY PRSNPDGVA+TFK
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK

Query:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSKFDNTS
        CVDPGTLTHVE+RQFDGSNWEASYDHTGIASFSK  NTS
Subjt:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSKFDNTS

A0A1S4E5L6 centromere protein V isoform X13.9e-7594.96Show/hide
Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK
        MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNF+STYTFGSHTAKHTFCK CGITSFY PRSNPDGVA+TFK
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK

Query:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSKFDNTS
        CVDPGTLTHVE+RQFDGSNWEASYDHTGIASFSK  NTS
Subjt:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSKFDNTS

A0A5D3CJK9 Centromere protein V isoform X13.9e-7594.96Show/hide
Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK
        MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNF+STYTFGSHTAKHTFCK CGITSFY PRSNPDGVA+TFK
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK

Query:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSKFDNTS
        CVDPGTLTHVE+RQFDGSNWEASYDHTGIASFSK  NTS
Subjt:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSKFDNTS

SwissProt top hitse value%identityAlignment
A0A0U1RR11 Centromere protein V-like protein 11.2e-2040.16Show/hide
Query:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFKCVDP
        LV H GGCHC  VR+ V APA +   DC+C  C  + + HF+VP  RF LL  + + + TY   +H A H+FC  CG+ SF+   S+P    V   C+D 
Subjt:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFKCVDP

Query:  GTLTHVEIRQFDGSN--WEASYDHTGI
        GT+  V I +  G +   EA+ +H  I
Subjt:  GTLTHVEIRQFDGSN--WEASYDHTGI

A0A0U1RRI6 Centromere protein V-like protein 31.2e-2040.16Show/hide
Query:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFKCVDP
        LV H GGCHC  VR+ V APA +   DC+C  C  + + HF+VP  RF LL  + + + TY   +H A H+FC  CG+ SF+   S+P    V   C+D 
Subjt:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFKCVDP

Query:  GTLTHVEIRQFDGSN--WEASYDHTGI
        GT+  V I +  G +   EA+ +H  I
Subjt:  GTLTHVEIRQFDGSN--WEASYDHTGI

P0DPI3 Centromere protein V-like protein 21.2e-2040.16Show/hide
Query:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFKCVDP
        LV H GGCHC  VR+ V APA +   DC+C  C  + + HF+VP  RF LL  + + + TY   +H A H+FC  CG+ SF+   S+P    V   C+D 
Subjt:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFKCVDP

Query:  GTLTHVEIRQFDGSN--WEASYDHTGI
        GT+  V I +  G +   EA+ +H  I
Subjt:  GTLTHVEIRQFDGSN--WEASYDHTGI

Q7Z7K6 Centromere protein V4.7e-3351.15Show/hide
Query:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFKCVDP
        LV H GGCHC  VR+ V A A +  +DCNCS C  + N HFIVP  RFKLL   +  I+TYTF +H A+HTFCK CG+ SFY PRSNP G  +   C+D 
Subjt:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFKCVDP

Query:  GTLTHVEIRQFDGSNWE-ASYDHTGIASFSK
        GT+  +   +F+GS+WE A  +H  I + SK
Subjt:  GTLTHVEIRQFDGSNWE-ASYDHTGIASFSK

Q9CXS4 Centromere protein V1.6e-3351.91Show/hide
Query:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFKCVDP
        LV H GGCHC  VR+ V A A +  +DCNCS C  + N HFIVP  RFKLL  + + I+TYTF +H A+HTFCK CG+ SFY PRSNP G  +   C+D 
Subjt:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFKCVDP

Query:  GTLTHVEIRQFDGSNWE-ASYDHTGIASFSK
        GT+  V   +F+GS+WE A  +H  I + SK
Subjt:  GTLTHVEIRQFDGSNWE-ASYDHTGIASFSK

Arabidopsis top hitse value%identityAlignment
AT5G16940.1 carbon-sulfur lyases5.6e-5870.15Show/hide
Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK
        M SEL+ H GGCHC K++WRV+A  SV+AW CNCS+C MR N HFIVP   F+LL DS +FI+TYTFG+HTAKHTFCKVCGITSFY PRSNPDGVAVT K
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK

Query:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSK
        CV  GTL H+E++ +DG NWE S+  TGIASFSK
Subjt:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSK

AT5G16940.2 carbon-sulfur lyases5.6e-5870.15Show/hide
Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK
        M SEL+ H GGCHC K++WRV+A  SV+AW CNCS+C MR N HFIVP   F+LL DS +FI+TYTFG+HTAKHTFCKVCGITSFY PRSNPDGVAVT K
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFK

Query:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSK
        CV  GTL H+E++ +DG NWE S+  TGIASFSK
Subjt:  CVDPGTLTHVEIRQFDGSNWEASYDHTGIASFSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTGAGTTGGTTGTGCATAATGGTGGATGCCACTGCAAGAAAGTAAGATGGCGAGTTGAAGCACCTGCGAGTGTTGTAGCTTGGGATTGCAACTGTTCTAATTG
CTTCATGAGGGCCAATACACATTTCATCGTACCTTTGGAACGGTTCAAGCTTTTAGGAGATTCTAGCAACTTTATTTCTACCTATACCTTTGGTTCTCACACTGCCAAAC
ATACCTTCTGCAAAGTTTGTGGCATTACCTCATTTTACCATCCACGCTCAAATCCAGATGGAGTTGCAGTTACTTTCAAATGTGTTGATCCTGGAACATTGACCCATGTT
GAGATTAGGCAGTTTGATGGGAGCAACTGGGAGGCCTCTTATGATCACACAGGCATTGCTTCATTCTCTAAGTTTGACAACACAAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCTGAGTTGGTTGTGCATAATGGTGGATGCCACTGCAAGAAAGTAAGATGGCGAGTTGAAGCACCTGCGAGTGTTGTAGCTTGGGATTGCAACTGTTCTAATTG
CTTCATGAGGGCCAATACACATTTCATCGTACCTTTGGAACGGTTCAAGCTTTTAGGAGATTCTAGCAACTTTATTTCTACCTATACCTTTGGTTCTCACACTGCCAAAC
ATACCTTCTGCAAAGTTTGTGGCATTACCTCATTTTACCATCCACGCTCAAATCCAGATGGAGTTGCAGTTACTTTCAAATGTGTTGATCCTGGAACATTGACCCATGTT
GAGATTAGGCAGTTTGATGGGAGCAACTGGGAGGCCTCTTATGATCACACAGGCATTGCTTCATTCTCTAAGTTTGACAACACAAGTTAG
Protein sequenceShow/hide protein sequence
MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFISTYTFGSHTAKHTFCKVCGITSFYHPRSNPDGVAVTFKCVDPGTLTHV
EIRQFDGSNWEASYDHTGIASFSKFDNTS