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HG10004239 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004239
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 25-like
Genome locationChr08:15082192..15083638
RNA-Seq ExpressionHG10004239
SyntenyHG10004239
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
InterPro domainsIPR039316 - CLAVATA3/ESR (CLE)-related protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030012.1 CLAVATA3/ESR (CLE)-related protein 25 [Cucurbita argyrosperma subsp. argyrosperma]9.7e-3373.08Show/hide
Query:  MSCYSSSCKLGSLAVMAFIWLLLANGSHQRGEPVVAGIEKATATMVAEFSGISKE-KVVGGHRGGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRP
        MS YS SCK  ++AVM FIWLLL NGSHQRG+ V  G+   T T  A+F GISKE +VVGGH G  VV  EWHLNYMSKRRVPNGPDPIHNRRAGNSGRP
Subjt:  MSCYSSSCKLGSLAVMAFIWLLLANGSHQRGEPVVAGIEKATATMVAEFSGISKE-KVVGGHRGGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRP

Query:  PGKA
        PGKA
Subjt:  PGKA

XP_004146759.1 uncharacterized protein LOC101209880 [Cucumis sativus]2.3e-3478.3Show/hide
Query:  MSCYSSSCKLGSLAVMAFIWLLLANGSHQRGEPVVAGIEKATATMVAEFSGISKEK--VVGGHRGGKVV-HPEWHLNYMSKRRVPNGPDPIHNRRAGNSG
        M+CY SSCK GSL +MAFIWLLLANGS QR EPVV G  K T     E SGISKE    VGG RGGKVV HPEWHLNYMSKRRVPNGPDPIHNRRAGNSG
Subjt:  MSCYSSSCKLGSLAVMAFIWLLLANGSHQRGEPVVAGIEKATATMVAEFSGISKEK--VVGGHRGGKVV-HPEWHLNYMSKRRVPNGPDPIHNRRAGNSG

Query:  RPPGKA
        RPPGKA
Subjt:  RPPGKA

XP_008464794.1 PREDICTED: uncharacterized protein LOC103502597 [Cucumis melo]4.1e-3175.96Show/hide
Query:  CYSSSCKLGSLAVMAFIWLLLANGSHQRGEPVVAGIEKATATMVAEFSGISKEK--VVGGHRGGKVV-HPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRP
        C+ SSCK GSL VMAFIWLLLANGS QR EPVV G  K T  M  EFSG+ K+   VVG   GGKV  HPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRP
Subjt:  CYSSSCKLGSLAVMAFIWLLLANGSHQRGEPVVAGIEKATATMVAEFSGISKEK--VVGGHRGGKVV-HPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRP

Query:  PGKA
        PGKA
Subjt:  PGKA

XP_022946527.1 uncharacterized protein LOC111450563 [Cucurbita moschata]9.1e-3173.08Show/hide
Query:  MSCYSSSCKLGSLAVMAFIWLLLANGSHQRGEPVVAGIEKATATMVAEFSGISKEKVVGGHRGGK-VVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRP
        MS YS SCK  ++AVM FIWLLL NGSHQRG+ V  G+   T T  A+F GISKE  V G RGGK VV  EWHLNYMSKRRVPNGPDPIHNRRAGNSGRP
Subjt:  MSCYSSSCKLGSLAVMAFIWLLLANGSHQRGEPVVAGIEKATATMVAEFSGISKEKVVGGHRGGK-VVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRP

Query:  PGKA
        PGKA
Subjt:  PGKA

XP_038886261.1 uncharacterized protein LOC120076488 [Benincasa hispida]8.5e-3782.57Show/hide
Query:  MSCYSSSCKLG-SLAVMAFIWLLLANGSHQRGEPVVAGIEKA----TATMVAEFSGISKE-KVVGGHRGGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAG
        MSCYS SCKLG SLAVM FI+LLL NGSHQR +PV A +EKA    TATM AEFSGISKE KVV G R GKVVHPEWHLNYMSKRRVPNGPDPIHNRRAG
Subjt:  MSCYSSSCKLG-SLAVMAFIWLLLANGSHQRGEPVVAGIEKA----TATMVAEFSGISKE-KVVGGHRGGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAG

Query:  NSGRPPGKA
        NSGRPPGKA
Subjt:  NSGRPPGKA

TrEMBL top hitse value%identityAlignment
A0A0A0KJ25 Uncharacterized protein1.1e-3478.3Show/hide
Query:  MSCYSSSCKLGSLAVMAFIWLLLANGSHQRGEPVVAGIEKATATMVAEFSGISKEK--VVGGHRGGKVV-HPEWHLNYMSKRRVPNGPDPIHNRRAGNSG
        M+CY SSCK GSL +MAFIWLLLANGS QR EPVV G  K T     E SGISKE    VGG RGGKVV HPEWHLNYMSKRRVPNGPDPIHNRRAGNSG
Subjt:  MSCYSSSCKLGSLAVMAFIWLLLANGSHQRGEPVVAGIEKATATMVAEFSGISKEK--VVGGHRGGKVV-HPEWHLNYMSKRRVPNGPDPIHNRRAGNSG

Query:  RPPGKA
        RPPGKA
Subjt:  RPPGKA

A0A1S3CMA2 uncharacterized protein LOC1035025972.0e-3175.96Show/hide
Query:  CYSSSCKLGSLAVMAFIWLLLANGSHQRGEPVVAGIEKATATMVAEFSGISKEK--VVGGHRGGKVV-HPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRP
        C+ SSCK GSL VMAFIWLLLANGS QR EPVV G  K T  M  EFSG+ K+   VVG   GGKV  HPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRP
Subjt:  CYSSSCKLGSLAVMAFIWLLLANGSHQRGEPVVAGIEKATATMVAEFSGISKEK--VVGGHRGGKVV-HPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRP

Query:  PGKA
        PGKA
Subjt:  PGKA

A0A5A7TRB3 Clavata3/esr-related 26, putative isoform 12.0e-3175.96Show/hide
Query:  CYSSSCKLGSLAVMAFIWLLLANGSHQRGEPVVAGIEKATATMVAEFSGISKEK--VVGGHRGGKVV-HPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRP
        C+ SSCK GSL VMAFIWLLLANGS QR EPVV G  K T  M  EFSG+ K+   VVG   GGKV  HPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRP
Subjt:  CYSSSCKLGSLAVMAFIWLLLANGSHQRGEPVVAGIEKATATMVAEFSGISKEK--VVGGHRGGKVV-HPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRP

Query:  PGKA
        PGKA
Subjt:  PGKA

A0A6J1G3Y8 uncharacterized protein LOC1114505634.4e-3173.08Show/hide
Query:  MSCYSSSCKLGSLAVMAFIWLLLANGSHQRGEPVVAGIEKATATMVAEFSGISKEKVVGGHRGGK-VVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRP
        MS YS SCK  ++AVM FIWLLL NGSHQRG+ V  G+   T T  A+F GISKE  V G RGGK VV  EWHLNYMSKRRVPNGPDPIHNRRAGNSGRP
Subjt:  MSCYSSSCKLGSLAVMAFIWLLLANGSHQRGEPVVAGIEKATATMVAEFSGISKEKVVGGHRGGK-VVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRP

Query:  PGKA
        PGKA
Subjt:  PGKA

A0A6J1KBR7 uncharacterized protein LOC1114940286.3e-3071.15Show/hide
Query:  MSCYSSSCKLGSLAVMAFIWLLLANGSHQRGEPVVAGIEKATATMVAEFSGISKEKVVGGHRGGK-VVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRP
        MS YS SCK  ++AVM FIWLLL NGSHQRG+ V  G+   T    A+F GISKE  V G RGGK VV  EWHLNY+SKRRVPNGPDPIHNRRAGNSGRP
Subjt:  MSCYSSSCKLGSLAVMAFIWLLLANGSHQRGEPVVAGIEKATATMVAEFSGISKEKVVGGHRGGK-VVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRP

Query:  PGKA
        PGKA
Subjt:  PGKA

SwissProt top hitse value%identityAlignment
Q8LFL4 CLAVATA3/ESR (CLE)-related protein 255.7e-0468.97Show/hide
Query:  HLNYMSKRRVPNGPDPIHNRRAGNSGRPP
        +L ++SKR+VPNGPDPIHNR+A  S RPP
Subjt:  HLNYMSKRRVPNGPDPIHNRRAGNSGRPP

Arabidopsis top hitse value%identityAlignment
AT1G69970.2 CLAVATA3/ESR-RELATED 262.6e-0778.12Show/hide
Query:  LNYM-SKRRVPNGPDPIHNRRAGNSGRPPGKA
        L+Y+ SKR+VP GPDPIHNRRAGNS RPPG+A
Subjt:  LNYM-SKRRVPNGPDPIHNRRAGNSGRPPGKA

AT3G28455.1 CLAVATA3/ESR-RELATED 254.1e-0568.97Show/hide
Query:  HLNYMSKRRVPNGPDPIHNRRAGNSGRPP
        +L ++SKR+VPNGPDPIHNR+A  S RPP
Subjt:  HLNYMSKRRVPNGPDPIHNRRAGNSGRPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGTTATTCTTCTTCTTGTAAGCTTGGCTCACTGGCTGTTATGGCCTTTATTTGGCTTTTGTTGGCCAACGGTTCGCATCAAAGGGGAGAACCAGTCGTGGCGGG
GATTGAGAAGGCGACGGCAACGATGGTAGCTGAATTTAGTGGAATTTCCAAAGAGAAAGTGGTCGGCGGCCACCGCGGTGGCAAGGTTGTTCATCCAGAGTGGCATCTCA
ACTACATGAGCAAAAGAAGAGTTCCCAATGGCCCAGATCCTATTCATAACCGGAGAGCTGGAAACTCTGGAAGACCACCAGGCAAGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGTTATTCTTCTTCTTGTAAGCTTGGCTCACTGGCTGTTATGGCCTTTATTTGGCTTTTGTTGGCCAACGGTTCGCATCAAAGGGGAGAACCAGTCGTGGCGGG
GATTGAGAAGGCGACGGCAACGATGGTAGCTGAATTTAGTGGAATTTCCAAAGAGAAAGTGGTCGGCGGCCACCGCGGTGGCAAGGTTGTTCATCCAGAGTGGCATCTCA
ACTACATGAGCAAAAGAAGAGTTCCCAATGGCCCAGATCCTATTCATAACCGGAGAGCTGGAAACTCTGGAAGACCACCAGGCAAGGCTTAG
Protein sequenceShow/hide protein sequence
MSCYSSSCKLGSLAVMAFIWLLLANGSHQRGEPVVAGIEKATATMVAEFSGISKEKVVGGHRGGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA