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HG10004271 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004271
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr08:15447950..15448450
RNA-Seq ExpressionHG10004271
SyntenyHG10004271
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464847.1 PREDICTED: uncharacterized protein LOC103502623 [Cucumis melo]6.3e-6686.83Show/hide
Query:  MNRTSDLQESELRPDYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERL-KRKKAESVTESKTPYNLGVTVESSKR
        M R SDLQESELRP+YRTISCELRALASMVRMELGC ESE    GDKLSVNSSSLFERGRFYDEYSARRNERL KRKKAE+V E KTPYNLGVTVESSKR
Subjt:  MNRTSDLQESELRPDYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERL-KRKKAESVTESKTPYNLGVTVESSKR

Query:  HSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI
         SSKKL NSLRKSVSAAYS ERSE APRYLLRSM KENKKPPLPVNLEKS+I  GE+KMVTRR RRI
Subjt:  HSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI

XP_022946511.1 uncharacterized protein LOC111450549 [Cucurbita moschata]6.7e-6886.75Show/hide
Query:  MNRTSDLQESELRPDYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERLKRKKAESVTESKTPYNLGVTVESSKRH
        M R SDLQE+ELRP+YRTISCELRALASMV+MELGCEESE G  GD+LSVNSSSLFERGRFYDEYSARRNERLKRKKAES +E KTPY LGVTVESSKRH
Subjt:  MNRTSDLQESELRPDYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERLKRKKAESVTESKTPYNLGVTVESSKRH

Query:  SSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI
        SSKKLANSLRKSV AA+SVE+S AAPRYLLRSMTKENKKPPLPVNLEKSVI AGE+K+ TR+VRRI
Subjt:  SSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI

XP_022999769.1 uncharacterized protein LOC111494019 [Cucurbita maxima]8.2e-6684.34Show/hide
Query:  MNRTSDLQESELRPDYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERLKRKKAESVTESKTPYNLGVTVESSKRH
        M R SDL E+ELRP+YRTISCELRALASMV+MELGCEESE G  GD+LSVNSSSLFERGRFY+EYSARRNERLKRKKA+S +E KTPY LGVTVESSKRH
Subjt:  MNRTSDLQESELRPDYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERLKRKKAESVTESKTPYNLGVTVESSKRH

Query:  SSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI
        SSKKLANSLRKSV AA+SVE+S AAPRYLLRSMTKENKKPPLPVNLEKSVI AGE+K+ TR++RRI
Subjt:  SSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI

XP_023546758.1 uncharacterized protein LOC111805770 [Cucurbita pepo subsp. pepo]1.5e-6786.14Show/hide
Query:  MNRTSDLQESELRPDYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERLKRKKAESVTESKTPYNLGVTVESSKRH
        M R SDLQE+ELRP+YRTISCELRAL SMV+MELGCEESE G  GDKLSVNSSSLFERGRFYDEYSARRNERLKRKKAES +E KTPY LGVTVESSKRH
Subjt:  MNRTSDLQESELRPDYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERLKRKKAESVTESKTPYNLGVTVESSKRH

Query:  SSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI
        SSKKLANSLRKSV AA+SVE+S AAPRYLLRSMTKENKKPPLPVNLEKSVI AGE+K+ TR++RRI
Subjt:  SSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI

XP_038886147.1 uncharacterized protein LOC120076404 [Benincasa hispida]4.6e-6988.55Show/hide
Query:  MNRTSDLQESELRPDYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERLKRKKAESVTESKTPYNLGVTVESSKRH
        MNR  DLQESELRP+YR ISCELRALASMVRMELGCEESENG  GDKL+VNSSSLFERGRFYD YSARRNERLKRKKAESV E KTP+NLGVTVESSKRH
Subjt:  MNRTSDLQESELRPDYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERLKRKKAESVTESKTPYNLGVTVESSKRH

Query:  SSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI
        SSKKL NSLRKSVSAAYSVERSE APRYLLRSMTKENKKPPLPVNLEKSVI AGE+K+  RR RRI
Subjt:  SSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI

TrEMBL top hitse value%identityAlignment
A0A1S3CME4 uncharacterized protein LOC1035026233.0e-6686.83Show/hide
Query:  MNRTSDLQESELRPDYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERL-KRKKAESVTESKTPYNLGVTVESSKR
        M R SDLQESELRP+YRTISCELRALASMVRMELGC ESE    GDKLSVNSSSLFERGRFYDEYSARRNERL KRKKAE+V E KTPYNLGVTVESSKR
Subjt:  MNRTSDLQESELRPDYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERL-KRKKAESVTESKTPYNLGVTVESSKR

Query:  HSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI
         SSKKL NSLRKSVSAAYS ERSE APRYLLRSM KENKKPPLPVNLEKS+I  GE+KMVTRR RRI
Subjt:  HSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI

A0A5A7T4P2 Uncharacterized protein3.0e-6686.83Show/hide
Query:  MNRTSDLQESELRPDYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERL-KRKKAESVTESKTPYNLGVTVESSKR
        M R SDLQESELRP+YRTISCELRALASMVRMELGC ESE    GDKLSVNSSSLFERGRFYDEYSARRNERL KRKKAE+V E KTPYNLGVTVESSKR
Subjt:  MNRTSDLQESELRPDYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERL-KRKKAESVTESKTPYNLGVTVESSKR

Query:  HSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI
         SSKKL NSLRKSVSAAYS ERSE APRYLLRSM KENKKPPLPVNLEKS+I  GE+KMVTRR RRI
Subjt:  HSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI

A0A6J1G3W4 uncharacterized protein LOC1114505493.2e-6886.75Show/hide
Query:  MNRTSDLQESELRPDYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERLKRKKAESVTESKTPYNLGVTVESSKRH
        M R SDLQE+ELRP+YRTISCELRALASMV+MELGCEESE G  GD+LSVNSSSLFERGRFYDEYSARRNERLKRKKAES +E KTPY LGVTVESSKRH
Subjt:  MNRTSDLQESELRPDYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERLKRKKAESVTESKTPYNLGVTVESSKRH

Query:  SSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI
        SSKKLANSLRKSV AA+SVE+S AAPRYLLRSMTKENKKPPLPVNLEKSVI AGE+K+ TR+VRRI
Subjt:  SSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI

A0A6J1KI16 uncharacterized protein LOC1114940194.0e-6684.34Show/hide
Query:  MNRTSDLQESELRPDYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERLKRKKAESVTESKTPYNLGVTVESSKRH
        M R SDL E+ELRP+YRTISCELRALASMV+MELGCEESE G  GD+LSVNSSSLFERGRFY+EYSARRNERLKRKKA+S +E KTPY LGVTVESSKRH
Subjt:  MNRTSDLQESELRPDYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERLKRKKAESVTESKTPYNLGVTVESSKRH

Query:  SSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI
        SSKKLANSLRKSV AA+SVE+S AAPRYLLRSMTKENKKPPLPVNLEKSVI AGE+K+ TR++RRI
Subjt:  SSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI

E5GBZ2 Uncharacterized protein3.0e-6686.83Show/hide
Query:  MNRTSDLQESELRPDYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERL-KRKKAESVTESKTPYNLGVTVESSKR
        M R SDLQESELRP+YRTISCELRALASMVRMELGC ESE    GDKLSVNSSSLFERGRFYDEYSARRNERL KRKKAE+V E KTPYNLGVTVESSKR
Subjt:  MNRTSDLQESELRPDYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERL-KRKKAESVTESKTPYNLGVTVESSKR

Query:  HSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI
         SSKKL NSLRKSVSAAYS ERSE APRYLLRSM KENKKPPLPVNLEKS+I  GE+KMVTRR RRI
Subjt:  HSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G42330.1 unknown protein2.2e-2446.2Show/hide
Query:  LQESELRP----DYRTISCELRALASMVRMELGCEESENGEGG-DKLSVNSSSLFERGRFYDEYSARRNERLKRKKAESVTE----SKTPYNLGVTVE--
        L + +L P     Y +IS E+ ALA MV+ E   EE        + L+ NS  LFERGRFY+EYSA+RNERL+RKK E   E      TPYNLGV  E  
Subjt:  LQESELRP----DYRTISCELRALASMVRMELGCEESENGEGG-DKLSVNSSSLFERGRFYDEYSARRNERLKRKKAESVTE----SKTPYNLGVTVE--

Query:  SSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI
        ++KR  + K   S++K+V    S+  S + PRY LRSM KEN+KPPLP+N+  S +    K + TR+ RRI
Subjt:  SSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCGTACTTCGGATCTGCAAGAATCGGAACTCCGACCTGATTACCGGACGATTTCTTGCGAATTACGGGCTCTGGCAAGCATGGTTAGGATGGAATTAGGATGTGA
AGAATCTGAAAACGGCGAAGGAGGCGATAAATTGAGCGTGAATTCGAGTTCTCTGTTCGAGCGAGGGAGATTTTACGACGAGTACTCCGCAAGGAGGAACGAGAGGCTTA
AAAGGAAGAAAGCAGAATCCGTGACGGAGAGCAAGACTCCGTACAATCTCGGCGTAACGGTTGAATCTTCGAAACGTCACAGTTCAAAGAAGCTTGCAAATAGCTTGAGG
AAATCGGTTTCTGCGGCGTATTCTGTGGAGCGGAGCGAGGCGGCTCCTAGGTATTTGCTGCGTAGCATGACGAAGGAGAATAAGAAGCCTCCATTGCCGGTGAATCTAGA
GAAATCAGTGATTGATGCAGGAGAAAAGAAAATGGTCACTCGAAGAGTCCGAAGAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCGTACTTCGGATCTGCAAGAATCGGAACTCCGACCTGATTACCGGACGATTTCTTGCGAATTACGGGCTCTGGCAAGCATGGTTAGGATGGAATTAGGATGTGA
AGAATCTGAAAACGGCGAAGGAGGCGATAAATTGAGCGTGAATTCGAGTTCTCTGTTCGAGCGAGGGAGATTTTACGACGAGTACTCCGCAAGGAGGAACGAGAGGCTTA
AAAGGAAGAAAGCAGAATCCGTGACGGAGAGCAAGACTCCGTACAATCTCGGCGTAACGGTTGAATCTTCGAAACGTCACAGTTCAAAGAAGCTTGCAAATAGCTTGAGG
AAATCGGTTTCTGCGGCGTATTCTGTGGAGCGGAGCGAGGCGGCTCCTAGGTATTTGCTGCGTAGCATGACGAAGGAGAATAAGAAGCCTCCATTGCCGGTGAATCTAGA
GAAATCAGTGATTGATGCAGGAGAAAAGAAAATGGTCACTCGAAGAGTCCGAAGAATCTGA
Protein sequenceShow/hide protein sequence
MNRTSDLQESELRPDYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEYSARRNERLKRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLR
KSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI